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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15811c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_THO_complex_subunit_7_homolog_[Amyelois_transitella]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000446 C nucleoplasmic THO complex
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:8.23 TPM:8.06
ORF EntryO_TrvaFAMAMG18228_complete:A_TrvaFAMAMG_TR15811c0_g1_i1
Sequence
(Nucleotide)
TTAAATTTGTCAAAAGTCAAAATTTTATTGAACTTGTCAAAAATTTATAAACAAAAGGTG
GATTACGAAAATAAATTCAATCGTAATACTTTAAATAATAAGTAGAAAGCTACGAAAACG
TAAATAAATCCTAATAGTTCTTGAAAAGTACGCATTTGTGACAAATTCTATAAATAATTC
ATCAAATCTTTCATGAATACAATGGGCGACGAGGATGTGATTCGGAGAAGACTCCTCATA
GATGGCGACGGCACTGGAGACGACAGAAGATTAAATGTGCTCCTAAAAACATTAATAAAA
TGGTGTAATACTACGGATGATTCTCCGGAAGAGAGCAAAGCGACACATGATCGAATGTTA
GCACAACTCTCACACTGCGAATTTGCGGTCACAAAATCACAGCTTGGCTCCGAAATGATG
GCAGCTGAGTTGCAAAGCTACGAGGCACTATCAAAAATTCTAGAAAATGGAATAGAGGTT
GCCAAAGGGAACATTCAAAAGAGCAAGGCAGATTTAGCTCAAGCCAAAACTGTGAGGAAA
AATAGAATCGAATATGATGTATTAGCTAAGGTTATAAGTGAACAGCCTGACCGTAAAGAA
ACTTCAGAAAGACTGACCGCTTTAAAAACTGAATTATCAAACTTGGAAACTACGAAACAG
CAGTTGGAAAGTCGTTTATCGTTACGTAAGAAACAGTTCCATGTGCTCGTAACATCAATA
CACCAGTTACAGGCTCTCTTGGACGAGCCTGATGATGTAGACAATATTTGTGATGATGTT
GTCATGAAAGATGTGTCAAATGAATCTTAGTGTTTTAATATAATGTGAAGTATTTTATAA
AACATTACAATAAAATGTATTTTGTCTTGAAAAAAA
(876 bp)

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