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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15774c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_5-methylcytosine_rRNA_methyltransferase_NSUN4_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:3.36 TPM:3.29
ORF EntryO_TrvaFAMAMG18209_complete:A_TrvaFAMAMG_TR15774c0_g1_i2
Sequence
(Nucleotide)
TTTATATAGTCATATTTTATTTAACCCTCACTAACTTCGCGATGTAAGACGGTCCGAAGT
TAGCAGATATAGATGGCATGACGAGTTGACCGTACTTCGGCGCAGTCACACCCGCGCCTA
ACTTCAGAGTACTGCTGAATCCGGATAAAGCTGGGGTCAGGTCTATAACATTAGCGATGA
TATCATTAGTTTCGAAGACTTGTTTGAGCGCCATGTGCACCACTCCGTCGTTCTGTATGG
GGCTGAGAGAACATGTCGAATATACAACTGTACCTCCCACTTTGGCGAGTCGTAGCGCAT
TCGCCAACAATTGTGACTGTAGTTCCGGTATTTTAAGTCGTTCTTTCACTCGATCCGGCC
TAAAAATGTTGTTTTCGTCTTCTTTTACTGAATGTCTGTCTGTTGTGCACGGTACGTCTA
CTAACACCTTATCAAACCCTTGGTCGTCTGTAAACGCTCTACCGTCAACTCTTTTGAACA
TCACTCTTTCCCGCCATTTGTTGCTCGTGTCGAAATCAAATAAGTAATCTTTGAATATCC
TTTGGGTCCTGTTAGACCTAGATATAGATATATCGTTACATATAATGACGTCCGGTAGTA
AAGTTTGTAGCGCGACAAGTGCTTTCCCGCCCGGCGCTGAGCACAGATCCAGCATTCTGT
CTCCAGGGTTCAGTCCTAACGCTAGTACTGCTAATACGCTTCCACAATCCATTGGATAGT
AGTTGTATACACCTGTCTGTGACCGTTTTGGTTCAGGAAACATATACGACTCACTGTCCA
TCTCAAAAGTGAATACTTTCAAATGTTCCGGATATCTTAAATCTGTTTCAGTTTTGATTT
CTAAAGGGAAGTCTATTACTTTTGAGTAATATGAATAGTGAGCAGATTCAGGCACCCAGT
CATCCATTCCTTTCAGTTTGGTAGCTGGTAAGTACTGGTACAGTGCCTCTGAAGTCAGTC
CTATTGATGGATCTATTAATCTAGATTCATCTATTACAGCTTCTGCTATGGATTGATCTA
ATGTTTTGCTAATTGGTTCACTTTGTTTTGTTCTTTCTTCAGTTTTAGAAACTTCTACAG
CTTCAAAGTCTAGTCTCTCTGGTATATTGTCTGTCTGCGGGTATATACTTGATATTTCAT
CTGAATGAGATTTAGCAGCTAATTGTTGCAGTTTATTTGTGTTGTCTACCTCTGTTGGAG
TGGAAGGTGTTTCTGTTGAGGGATGTTGTTTGTGGAAGTCTTCTTGTATTGTTATTAGTT
CCTTTAGGCAGTGTGCTCCTCTATTTGATAGATATAGCATAGTTTCCTCAGCGTCTCCAT
AGTTATTGATAACGGCTACATACTTCGAACGTCGTAGTAGAGCCTCTTTCATAGGATCCC
ATTCTTTGCCGAAAACGGACCCGTAAAATTCATCGAAATGATTCATTGCTTTATATTTGG
GTCCTGTTTTACGTTTTAGTTTGGCCCAATGTGTTTTAGATTTATGTCGTGACTGTGTCA
ATAAATAGGTGCACGTTAAAGGGCCTTTTTTAACTATGTTAATTATATGGAACATTTTTT
TATTTTACTTGTGATTTTTTTAACAAATTATCAATTATTTGATCAAAATTAATATTACAA
AATTTGTAGGTTATGAA
(1637 bp)

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