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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15774c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_5-methylcytosine_rRNA_methyltransferase_NSUN4_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:1.64 TPM:1.61
ORF EntryO_TrvaFAMAMG18207_5prime_partial:A_TrvaFAMAMG_TR15774c0_g1_i1
Sequence
(Nucleotide)
GCAAAACTCAAAAGAATTTAGACCTTAACAGCTTAATATTAAGAGCCAATAAGACTTTAT
GTACACTCACATAACATTAGCGATGATATCATTAGTTTCGAAGACTTGTTTGAGCGCCAT
GTGCACCACTCCGTCGTTCTGTATGGGGCTGAGAGAACATGTCGAATATACAACTGTACC
TCCCACTTTGGCGAGTCGTAGCGCATTCGCCAACAATTGTGACTGTAGTTCCGGTATTTT
AAGTCGTTCTTTCACTCGATCCGGCCTAAAAATGTTGTTTTCGTCTTCTTTTACTGAATG
TCTGTCTGTTGTGCACGGTACGTCTACTAACACCTTATCAAACCCTTGGTCGTCTGTAAA
CGCTCTACCGTCAACTCTTTTGAACATCACTCTTTCCCGCCATTTGTTGCTCGTGTCGAA
ATCAAATAAGTAATCTTTGAATATCCTTTGGGTCCTGTTAGACCTAGATATAGATATATC
GTTACATATAATGACGTCCGGTAGTAAAGTTTGTAGCGCGACAAGTGCTTTCCCGCCCGG
CGCTGAGCACAGATCCAGCATTCTGTCTCCAGGGTTCAGTCCTAACGCTAGTACTGCTAA
TACGCTTCCACAATCCATTGGATAGTAGTTGTATACACCTGTCTGTGACCGTTTTGGTTC
AGGAAACATATACGACTCACTGTCCATCTCAAAAGTGAATACTTTCAAATGTTCCGGATA
TCTTAAATCTGTTTCAGTTTTGATTTCTAAAGGGAAGTCTATTACTTTTGAGTAATATGA
ATAGTGAGCAGATTCAGGCACCCAGTCATCCATTCCTTTCAGTTTGGTAGCTGGTAAGTA
CTGGTACAGTGCCTCTGAAGTCAGTCCTATTGATGGATCTATTAATCTAGATTCATCTAT
TACAGCTTCTGCTATGGATTGATCTAATGTTTTGCTAATTGGTTCACTGGAATATAATGT
GTAAATTAAAAG
(972 bp)

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