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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15449c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_polymerase_zeta_catalytic_subunit_isoform_X4_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0016035 C zeta DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.88 TPM:1.85
ORF EntryO_TrvaFAMAMG18124_5prime_partial:A_TrvaFAMAMG_TR15449c0_g2_i2
Sequence
(Nucleotide)
TTTCATTAGATTTTTAAAAATCATAATACAAGTACTTTTTTTAAACTAATAAATAACTTA
AAATTATAAAAAATATGATTGCACTATATTTTGTTCATCTAAGTTGCACTTCATTATAAG
TATATCATTCCAAGTGAGTCAGTATCTCCGTAATTTGCGAACATCTTTCATGCGCGTTTA
AACATCGCCAATATACTGAACATTCCAGATTTTCACATTTTTCGGCGTTTATATGGCCAC
AACAGGAGTTGCATAACTCATAACAAGAGTGCAAGTATATGGCAGCGTTGCTGGCGCGCG
TGTACAAGATGGCGGCGGCTCGCTGTGTGCGCGCGCACGGCGGACACACGGCGGCCGCGC
GGACGTTAGTGCGCACCCCGCACACCGCGCAACGCTCGCGGGACATGTAGCGCGCTATGC
CGCCAGACTGAATCTGTTCCAGTTGTTGAGCTGTGCGATTGTAACCTAACTCGTTCCACC
ATTTAAAGACATCGACGCCTAACAGCGAGAGGCATCGATGTAGCGGCGGCAACAACACCC
GCGTCGCGTAGTACGCTACATGCGGTCGCAGTGAACGGTCGCGTGTGAGTTCGAGCGGCG
TGCGAGCCAGTCGCAACAACGGCACCCCGGGCGCACCCGCCGTCACCAACCACGACACGC
GCCAGCCGGGACGAGGGACCGCTCGACGATCTCTCGTACCTATACGTTTGGCTATTTCAT
TAGGTGGTGCGGAAGCCCCGGGCCGGTACCCCGCGGCGCCGTGGTACTCGCGCGTGAACA
ACAACTCGTGCAGGGGGAGCGAGTTCTCCGCCAGCTTGCACAGTGTCGCCTTCACCTGCC
TCTTCACGACCGACATGTCGCCGTGACTGAATAGCTCGCATAGAGATTGTTGTAGAAGCT
TAACACCAGCTGGACAGCCATCTCTTCGGACAGTTTCTATTCCTTTTGCCTCATAAGTAG
GGTTCTCTTGATCAGAACTTTCATACATAAAACCAACATAACGTTTTTTCGTTTGCAGAA
TGCACGGTTGATATACCTTTTCCAACTTAAGCGCAACTGGCGAGGGGTTGTCGGCGGTCA
CGGCGTCGGCTATCTGCTGCCCGATCTCGAAGGCTTCAGCGCGACTTCGGCCCGGAACTA
ACACGAACATAGAGTCTGTATCGCCGTAGATTACCTTGACATTCCAAGTAGTGTTTTGTC
GAACTAATTTGATAGCTCTTTCAAGTGTTTCTCTTCCTTTAGCCACAACACTATCCCCGA
CCTCCACGCACGGCATGCGACCACTAAAGTTAGCGGCCGTGTACCCGTACGTTACGTTGG
CTATTAATTTTAAACCCAACTGTCTCGAATGCATGGCTTTCTTCACAGTTTCATCTGTCT
GCATTTTCATAGTTTTCTTGACGGCCTGTCTGGCGGCCAGGATCCTCCTCAGCAGCGCGG
GGAGCACTCCGCGTCGAACTGAAGCCTTCACGAATCCGATCCCGACCGGCGACCAATGTA
CGAGACCATTTTTAGCGAGCGTCTCTAATTTTGATTTTGAAACTTTTAGCCGCCAAGCTC
CGAATTCGTAGGCGGTTTCACCATTTATATTTTGAACGCGTCCAATGCATGTTGAGAAAC
AGTAGTTGTAAGCTATCATCATCGACGGATACAAGCTCTGGAAGTCCAGGACAATCACTG
GATCTGAGTAAAAACGCGATTCTGGTTCAAATATGAGAGGTAGGCATTCAGGAGCTCGCA
TGGCGGCTCTCTGTTTGATTGTTGGTGATAGCGCAATAAGATTGAGCGGTCTGGCCGCTC
GGAGCATCAGAGATTCAACACGAAATTGCGATCCTCTTGACAGAACTTCCCACCACTGCA
GGCCAAATAGTCTGGCGAGTTCTGAAGTCCTGTTTATTATGTCAAGTTTTTGTAGCATTC
TGACTGTACCCGAGAGCCTCGTCAGATAGTACTCCACAGTGATCCACCTTAACATCCTTG
AGTCATCGCACCACCATTCTGATAATTGCGCATAACTATATGACGGTACTCGTTCCTTCA
AAACTTCATACATACAGTTTTCAAAACTATAACTAGACAACGCCAGTTCGTGACGAAATA
ATCGCCACACATTGAATATAACTCTCCCAATAATTCTACCTTCATAATCGTATTCGTTTT
TCTTCCACCGTTTTTGCCTATTTTTCTCAATAATTCTAGATACGTCTTTTAATATATCTA
GTCCTAAAATTTCCGCTCTCTCTAAAAAGTATCCCCATGAATTGAATTCTATTTCATACC
CACACATAATATCTGGATCGTGTTCGTTAACTAATTTAATTACTTCATCTATTATTTCGT
TTTCGTCACTAACATACTTTACGGGTACATTAAATACACATCTATTTAAATAGTCTGAAT
TTGAATCAACAACAATAATTTCGGTGACTGATTTTTGTAGAAAATGATCATTCGGACAGT
CGTTGGTTATAGTGTAAAATATAGCTTTTATGGGATCGATTGCTGGATCGGGATGCATTT
GAGATCTCACCGAAGTGTGAACTTCAATAATCATTGAAGTTAGAAAATCAACGTTTACAA
TAGCTGGTCCACAAGGACTACTACTTTCCTTGTAGGTATCGGAATTTCCAAAGCAGAGAA
AGGATCCATCAGTGTTCATTGTTATTTGAAGACAATTATCTGTATTTGAAATCTCATTTT
CACAATTGCCTGTGCTTATAATACTGCTGTTAATTACATCTTCATTTAAACCTAATGCTT
GAGAATTATTGAGATCATCGATATTTTTCGTAATTTCTTGCTCTGTGGAATTTGAGAGCT
TTTGAGCTTCGTTACGATCATTCATCCATTTCGTTACTTGTTTACTTGTTGGAGGTCTAG
CCACAGGTTCCAAAACATATCTTGAATTTCCTGCCAATAATGTTTTCAGTGTCTCTGGTT
TAGATTCTTCTTTGGTTTCATACCTTTGAAGAAATAGCATTTGTCTCCAATCCTCTATAC
TCACAGATTCTAAGACATTATCAAAGGGTTTCTGATCCCGAGACAGTTTACTGTGTAGCT
TATAAACAGTTTGCCCGATTTCTATCTTTTCCCCAACATCTTTATGATTCGA
(3112 bp)

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