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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15417c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ribonuclease_H1_[Plutella_xylostella]
Ontology
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005737 C cytoplasm
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:3.98 TPM:3.90
ORF EntryO_TrvaFAMAMG18056_5prime_partial:A_TrvaFAMAMG_TR15417c0_g2_i1
Sequence
(Nucleotide)
GGGAAAGTGTTTATGTCCCTAAAAGGAACAACAGGGTTTTTGTTACATACTGTATAAATT
AATATAAAAATAATTTATAATGTTGGATATGTACTTAAACATAAACTAGAAGTACAAGTA
TTATTAAATGATTCAAATTCAACATCTTACCCAATAAACTATGTATTGTAGGAACAAATT
AGTTTTGGAATCAAAAATAGAGTTATCAATTCATGTTTATGTATATTACTTACAAATTAA
TACCGAAATTAGTTACTAGAGTTCCAATTATTCAGTCTCTCGATTTATTGATCATAATAT
TACAACACTAATCCATCAAAAATAACAATCACAGTTCACTCAAAAGTTCATACTTCAAAT
TTAATTATTATGTTTCTTCTTCTTCGAAAACTTAAATATTTATGCTAGAGTCACATTGTT
GTTGCAACAAGGCGATGTAATCTTTAACAAACTTAAAATATGGAATTATAGTTCGGCCGT
TCAGAGAATGCGTTCTCTGAACGGCCGAACTTTAATATCACTTGATGACTGACTCACAAA
CATAACATGAGATCATTTTGCTTCAAGATTAAGACATCAGTTCTCTGTTCTACCCCACTT
TATTGGTTTTTATATCTTTGCTTTAGCCACAAAAGTACCTGCTTTTATGAACTGACCAAT
GATTGCATACTTGAAAAAGCTTTATCAGTTTGAATTGTCTTTTAAATCATGGAATTTATT
CATGCTCTGCATGGACTTATTCCATTGTTCTCAAGATAAGGAAACAAAATGCAACAGTTT
TTTGTCTATAACTGAACACATAAAGTACTTAAATTCTACTATTTGTTGTAAGCTGCAGCG
CCTGCTTTAGCCAACTGGTCTGCCATTTCATTACCGTGGATTCCCCGATGTGCCTCCACA
TAATTCCACTTGATGTTTATCTTGTGTTGTACACTGTCCAGATCTTTGAAGTCTTTTTCA
TTCTTGACTGGTTCTCCAGATTGTAATTTCCAACCTTTTCGTTTCCACCCAGGCATCCAT
TTAGTGACTGAATTAATTACAAATTTTGAATCAGTGTTGATAGACAGCTTAGTGACTCCA
TTCTGTATAGCTTGTTTTATTGCTTTGGTTGCTGCTTGTATTTCCCCACAATTGTTAGTG
GCCCGGCCTGAAACGGGCTCACTGATGTTAAGAGGGTGCCCATCTGCCCAGAATACACCC
AACCCAGCTTTAGCACTGTTCTTGCCATTTGCTGAACAAGCACCATCAGTGTACACCTGC
ACATACCCATCGCTGTCCACGTCAAATTCATCTGCCGATCTTCGTTTCTTGGGCTCAGGT
GGATCAATCAATTTAGTTTGTCTTACTGGTTTGGCACTTTTCATGATTTTGTCAACACTT
TTTGTAAAGCCTTTTAACCTCATCTCGATGTCGTCCATTTGTTTCGTAATTATGGTGTTT
AAGTCGTCTGAAACTTCATAATCGTCATCAAAACTGTCGTCTTTTGGTTGTGCCTTTGGT
TTGATTGGTTTGCTTGGTTTCCTTTCATTAGATGAGCTGGATGATGTTGAGTACGGTCTT
TTTAGATTACTGTATGTTTTGTGCTTTTTTACGTCCGCGTTGTAACTATTTCCTGCTTTA
GGGGGAGCACCGCCTTGTCCATCTATAAATTCTTGGGCCTGGTTTATTGTGTCGAACTTT
TTAAACTTGGCGCCAGAAAAACCTTTGACTTGGGCTTCACAGTCTGCCCAGGTCATGAAA
ATACCTGGAGTCCGTCCTTTTGCCACTGCGTAAAAAGGCATTGTTGTTGCAAAACATGTA
TTTCGATGCAATATTGGATTTTTTTTCAAAACAGCAGTTCGAATAAAA
(1848 bp)

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