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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15411c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Bardet-Biedl_syndrome_5_protein_homolog_[Bombyx_mori]
Ontology
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001947 P heart looping
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0006810 P transport
GO:0007601 P visual perception
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032402 P melanosome transport
GO:0034464 C BBSome
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0044458 P motile cilium assembly
GO:0046907 P intracellular transport
GO:0050896 P response to stimulus
GO:0060170 C ciliary membrane
Transcript
Level		FPKM:6.51 TPM:6.38
ORF EntryO_TrvaFAMAMG18045_complete:A_TrvaFAMAMG_TR15411c0_g2_i1
Sequence
(Nucleotide)
TAGTGCGGTTCAACTCCCACATACACACAGGGGATCCGGTGATTTCCTCCAACTAAAAAA
AAAACTTCAATTACGCTTACATTCTTGTTCAAATTGAGTTTTAGAGGTACAAGCAAACCG
GTTCAACCACTCGGTTACCAAAACTACATCTGTCCCATACCACTTAATCGAAAAAGATTT
ACGTAAAGACAATACTGGCTGAAAACGCCGAAGGAAAATATCGTGAGTAAACCTGCATAG
TGGAAACGGAAATAGTAACCCTTTTTAGGACATGTGATGTCCCCAATCAAGCAAGGCAAG
CGCGGTGGTGATGCCTTTGCATAGACAAAGGTCTATCAGGGACGGTAACAGCTAACGATC
AGATGGCCCGTTAGCACGTCTGCCTACGAAACAATAAAAAAATCGCGAATGTGTCAAATT
CGACATTACTAACATCTCTACTATAAAACTATGATTATCTACTTGTTTTTCACTTCAACG
TCAAAATTCTGTGACTGTTTTTTTAGTGTTAACAGTAACTGTTACCAGAGTAGTAGATCT
TATTTAAATTCTATCAAGAAATCATTACAGAGCGACTTACATTTATTTTTCAGCCATCGG
CCTAAACTGCCTCTTATCAACAAGCACGAAGGTCGTCAATTCTGGTCTCCGAGGAACAAC
ACAAGCTCTGCACGTGCTAGCGTCTTACAAAACTAACAAATATGAGTTTATCTTCACCAA
TCTGTCGCCGAACTGTGTCCGCCATTATACTTCTGTTGTTGGGGTGCACAAAGCTTATAT
CAACTCAAGATTATACAGAGATTTGAAGCTACGTGGAGCTATTGTACACAACAAGCAGTT
AAGGATGGTGCCTCAAGAGAAGATCCTTCTCAATGAACACAGTATTTGGAATTTGTCCAG
CGATTCGGGGAACCTTGGCACGATGTTAGTAACCAACATCAGGATAGTTTGGTACGCGGA
CATCAACGAAGCATTTAATGTGTCTATGCCTTACATTACTATTGACAGTATTTCAATACG
AGAGTCCAAGTTCGGTGAGGCCCTAGTGTTTGTCATCAGACAGTCTTCAGGGGGTTATGT
GCTTGGTTTCCGAGCAGATCCGCGGGATAGACTGCGTCCATTGCTTTCCGAACTACAAAC
ACTGCACCGTGCTTATACTGAGAAACCCATATTCGGTGTAGAAATTAACTGGGAAGACGA
GACTCCAACAACAGTAAACGATGAAATTGAAGAATTAGAAGAGATAGGAGAACCTCGAGG
GGAGATGGGGCCAAGTTTATACTTAGCGTCTCAATTGACAAAACATAAAGAAGAGAATGA
ACTCCAGCCAGTCTACAACTCATATTTAGGGCTTGCTATAGAACCTTTGAAAGAAGGATT
TACTCTGAAAAGCTTGTTTGAAGTGCAGAGCACATCGTAATACAATAAATAATTAAGTAA
ACTTGAAAGTTGATTAGTTTTGTTTATGTTCAACGGGCACTTCTTTTACCAAATTTATTT
TTTCTCTATCAATAAATATGATTCTAGGCAAACAGTAATTAACTCTTTTCTTAACTCTGG
AAGGAAGGAATAATATGCTGGAAGATTACACTGTATGGTCAAATATCTTTCACTTCTTCA
CTAGCGAAATTAAAAAAAAAAATGTATCGTTGACATTTCGGAATAAGTGACGGTTGACAC
AATAACAAAGACTACCCAAGTACCCAAACAAGTGAAACAAGTTGTAACTTGTTAAGAAAA
TCTAATTTATTGAATAAAATGTACTAAAACAGATTATGTATATAATATTTTAATAAAAAG
TAGCATATAAGCATAAGAATAAACAATTTAAGACATTAAAAAAAAAA
(1847 bp)

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