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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15400c0_g2_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106142693_isoform_X2_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0032403 F protein-containing complex binding
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051797 P regulation of hair follicle development
Transcript
Level		FPKM:1.08 TPM:1.05
ORF EntryO_TrvaFAMAMG18015_complete:A_TrvaFAMAMG_TR15400c0_g2_i4
Sequence
(Nucleotide)
GTCAGATAATAAAAAATGGCGGACGAAGACGAAATTGATATTTTGGGTGATTTTTCATTT
AATTCTTGTTTTGCACAAAATAATCAGGGAATTCCCTCTTGCTCCAGCAGAGAAGACACA
GTGCATCCTCAGTGGTTATTGGACTCCACGGAAGCTAACTGTTTAAATAATGGGCCATAT
CGCAAATTACTTGGAAACAGCACATCGAGACAGTACAATAATAATACACATACGGAATGG
AGCAAAAAGGAACGACAAATACTTGTTACAGAAATGGCTAAATACGGTAGAAACACTAAA
AAGATATCTCAAACGCTAAAAACCAAAACAGAAGCTGAAATCCAAGCTATGATTGAGGCT
GAATTTGGTGTATTATTAGAAACATCTGTGCCTGGCTTAGAAAAAAATGAAGATTACGAG
ACCACACCGCAAGTAGTTCAAGAAGAAATAATAGCCATGGAACCTACAAACATACAAAAT
AAATTATCTCCAAGAAAAAAGAAATATGTCCGATCTAAAAATAGTTTACTAAAATCCAAT
ATTATAAGTGATGTTAACCCTAGTATAGAAACATCGGAAATAATTTACGAAGATGACTTA
ATAGTTGGCTCAACTGAATCCATAGGTTCCGATCTCGAATTAGCTGATGTAGTATCAAAG
AATCTAGCTAAATATCAGGCTAAGGCGAAAGCCGAGAGAAAAATTGGGAATCATCGTAGG
AAAGTGTCAAGGAACTATGATAAGAAACCTAGGAATAAAAGCAAAGAGTTGAAATCTCCT
CAGGGCAGGCAGAGGAAGAATTCATTCTTGTCTGATGATAGTAAAAGTCCTAAAATGCAG
TTATTGTTAGGATCGGGACAGGCTTTACCTATATCTGAAGGGGAACAAGTAATAAAAATA
GAAAAGAAAAAAGACTCTGATCCAGAATCTGACATAGACATTGACGTTGATAGTGAAAAT
GAGAGTAAACAGAGGAAACCAAAGACAATGAGTAAAGAAGATGAAGCTCCCATAGCTGTT
CCTTTAGGCAAGTTTGAACCAATGCCTAGAAGACAAAAGAAAATTAATCTGGACGGCGGC
GGTGGCTATACAATAATGCATACTGAGTCCGGTGATCTGTATCAAGTAGCTTCGGAGCCG
CGTAAAGAAAGACCCCCGCGGAAACAACCCATACATCTCATACAATGTCGCGTGTACAAT
GCTGAAAGACCCGCTCCCTTCGAAGTCCGTCTATACATATCAGCGCTGTTATCGATGGAC
TGTCACGCGCACACTTCCCGCGCCGAGGTCATGGGGCTGGCGGGCGGACACGTGGCCTCC
AACGTCCTCACCGTCACCGCCTACAGACCCACGGCGGCCGCGGCCGGGACCACGCACTGT
GATATGGATCCTGTATCCCAGGCGGCTGCAGCGGAGAGTCTCCGTCTGTCCGGCGTGTCC
GGGTGCGGCTGGCACCACTCGCACCCCGGCAGCGCCGCGCGGCCCTCCGCCCGCGACCTC
CGCACGCAGCGCGCCCTGCAGCGAGCCCTGCGCCGCCCCTTCCTCGCCATCATCACCTCG
CCGCACTGGCAGCCCGGCCGCACCGCCACGCAGTACAGATGCATTCGCGTGGAAGAGGAC
ATTCCTTCAGACAACGAGGACGACATCCCGACAGGATATCAGTTTAGTGTCAAACTCGTA
CCAGATCTCAACCAGGACAACCTGGACTCGTTCCTCGCTGAACTGACGGCCATGCGGGCG
GACGAGATCAATGATATGTCCGTGGACATGAACAATGATGTGTGTCCGTTAGCTAGGATG
ACGGTTTTGGATAAGTTCATATCGAGCGCTCGTCACCACTTGCGCTCATCCGGATACAGC
GACGACGATCCCTTCATACTACAACTACTGCAAGGAATCAGAGATGTGTTCAGATAGCTC
ACGATTATGCCTTAGAAAAGTTAAATAATGTAGCATTAACATAAAATATTTACTGTTCAG
AAGAGTGTTAACTGTTATCTCAATTTTCATTCGTAATTTATTCAACAAGAAAGGTCGCCA
ATTTTTTTTTGTTTTTAATAAATAGTGCATTTTCATTGCCGTGTCCACGAGTGATGGGTG
CATTAGTGAAGCATAGTAGTGTTTGATAGTAAAGTAGAGAAATGACTGAGAGTGACGTAA
ATGGATCATATAACAAAGTGAAGTAATAAACTTCCTCTTTGAAGCGGACTGTATTCAATT
ATAATTATATTGTCCCATAATATACTATGCTTAAAATTCTTGGTGAACAAGATTCCACAA
TATGTTTTTTTATTTCATAATATTTTTTCATTTTTTTCTTCCACAATATGTTTTTTAATT
GAAAATAAAAACAAATTGCTAGTGTTTTAAATAGTTTTTAGAAAAATTGATAATACATGT
ATTATACAGGGTGATTTCCTAGTGAGGGTACATATTGAAGGTCATGGTAGATGATGGTTA
TAT
(2463 bp)

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