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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15400c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106142693_isoform_X2_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0032403 F protein-containing complex binding
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051797 P regulation of hair follicle development
Transcript
Level		FPKM:3.20 TPM:3.13
ORF EntryO_TrvaFAMAMG18006_complete:A_TrvaFAMAMG_TR15400c0_g2_i1
Sequence
(Nucleotide)
GTCAGATAATAAAAAATGGCGGACGAAGACGAAATTGATATTTTGGGTGATTTTTCATTT
AATTCTTGTTTTGCACAAAATAATCAGGGAATTCCCTCTTGCTCCAGCAGAGAAGACACA
GTGCATCCTCAGTGGTTATTGGACTCCACGGAAGCTAACTGGTATGATAAGAATAAAGAT
AAACATTTAAATAATGGGCCATATCGCAAATTACTTGGAAACAGCACATCGAGACAGTAC
AATAATAATACACATACGGAATGGAGCAAAAAGGAACGACAAATACTTGTTACAGAAATG
GCTAAATACGGTAGAAACACTAAAAAGATATCTCAAACGCTAAAAACCAAAACAGAAGCT
GAAATCCAAGCTATGATTGAGGCTGAATTTGGTGTATTATTAGAAACATCTGTGCCTGGC
TTAGAAAAAAATGAAGATTACGAGACCACACCGCAAGTAGTTCAAGAAGAAATAATAGCC
ATGGAACCTACAAACATACAAAATAAATTATCTCCAAGAAAAAAGAAATATGTCCGATCT
AAAAATAGTTTACTAAAATCCAATATTATAAGTGATGTTAACCCTAGTATAGAAACATCG
GAAATAATTTACGAAGATGACTTAATAGTTGGCTCAACTGAATCCATAGGTTCCGATCTC
GAATTAGCTGATGTAGTATCAAAGAATCTAGCTAAATATCAGGCTAAGGCGAAAGCCGAG
AGAAAAATTGGGAATCATCGTAGGAAAGTGTCAAGGAACTATGATAAGAAACCTAGGAAT
AAAAGCAAAGAGTTGAAATCTCCTCAGGGCAGGCAGAGGAAGAATTCATTCTTGTCTGAT
GATAGTAAAAGTCCTAAAATGCAGTTATTGTTAGGATCGGGACAGGCTTTACCTATATCT
GAAGGGGAACAAGTAATAAAAATAGAAAAGAAAAAAGACTCTGATCCAGAATCTGACATA
GACATTGACGTTGATAGTGAAAATGAGAGTAAACAGAGGAAACCAAAGACAATGAGTAAA
GAAGATGAAGCTCCCATAGCTGTTCCTTTAGGCAAGTTTGAACCAATGCCTAGAAGACAA
AAGAAAATTAATCTGGACGGCGGCGGTGGCTATACAATAATGCATACTGAGTCCGGTGAT
CTGTATCAAGTAGCTTCGGAGCCGCGTAAAGAAAGACCCCCGCGGAAACAACCCATACAT
CTCATACAATGTCGCGTGTACAATGCTGAAAGACCCGCTCCCTTCGAAGTCCGTCTATAC
ATATCAGCGCTGTTATCGATGGACTGTCACGCGCACACTTCCCGCGCCGAGGTCATGGGG
CTGGCGGGCGGACACGTGGCCTCCAACGTCCTCACCGTCACCGCCTACAGACCCACGGCG
GCCGCGGCCGGGACCACGCACTGTGATATGGATCCTGTATCCCAGGCGGCTGCAGCGGAG
AGTCTCCGTCTGTCCGGCGTGTCCGGGTGCGGCTGGCACCACTCGCACCCCGGCAGCGCC
GCGCGGCCCTCCGCCCGCGACCTCCGCACGCAGCGCGCCCTGCAGCGAGCCCTGCGCCGC
CCCTTCCTCGCCATCATCACCTCGCCGCACTGGCAGCCCGGCCGCACCGCCACGCAGTAC
AGATGCATTCGCGTGGAAGAGGACATTCCTTCAGACAACGAGGACGACATCCCGACAGGA
TATCAGTTTAGTGTCAAACTCGTACCAGATCTCAACCAGGACAACCTGGACTCGTTCCTC
GCTGAACTGACGGCCATGCGGGCGGACGAGATCAATGATATGTCCGTGGACATGAACAAT
GATGTGTGTCCGTTAGCTAGGATGACGGTTTTGGATAAGTTCATATCGAGCGCTCGTCAC
CACTTGCGCTCATCCGGATACAGCGACGACGATCCCTTCATACTACAACTACTGCAAGGA
ATCAGAGATGTGTTCAGATAGCTCACGATTATGCCTTAGAAAAGTTAAATAATGTAGCAT
TAACATAAAATATTTACTGTTCAGAAGAGTGTTAACTGTTATCTCAATTTTCATTCGTAA
TTTATTCAACAAGAAAGGTCGCCAATTTTTTTTTGTTTTTAATAAATAGTGCATTTTCAT
TGCCGTGTCCACGAGTGATGGGTGCATTAGTGAAGCATAGTAGTGTTTGATAGTAAAGTA
GAGAAATGACTGAGAGTGACGTAAATGGATCATATAACAAAGTGAAGTAATAAACTTCCT
CTTTGAAGCGGACTGTATTCAATTATAATTATATTGTCCCATAATATACTATGCTTAAAA
TTCTTGGTGAACAAGATTCCACAATATGTTTTTTTATTTCATAATATTTTTTCATTTTTT
TCTTCCACAATATGTTTTTTAATTGAAAATAAAAACAAATTGCTAGTGTTTTAAATAGTT
TTTAGAAAAATTGATAATACATGTATTATACAGGGTGATTTCCTAGTGAGGGTACATATT
GAAGGTCATGGTAGATGATGGTTATAT
(2487 bp)

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