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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR15384c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup50_[Bombyx_mori]
Ontology
GO:0001841 P neural tube formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
Transcript
Level		FPKM:8.36 TPM:8.19
ORF EntryO_TrvaFAMAMG17975_complete:A_TrvaFAMAMG_TR15384c0_g1_i2
Sequence
(Nucleotide)
ATTGAAAATGAACGTCGGAGTGGTGAATTTAATTTGTAAATCATAAAAATTGCATTTCTT
AAAAGAGAAAGTGAAGTTAATTCTTAGTAAACAGTTGGTTAGTAGTATAGCTACTAGAAA
AATCATACTTTAAGTAACTATCAATGTAATTTACAAGGAGTACAACATAAAACGTGTTGG
GTGTTCCACAATCCGGTAATCATGTCTGTAAAACGGCAAGCAACGACGGAACTAAACCAT
GAAAACTGGGATCAAGAAGACCCTGTAGAAAATAAGGAAATGGGTAGTTTTAAAGCTGCA
CCTAAAGAGATTCTAGAAAAGCGCATCATTAAAACGGCAAAAAGACGAACATTAGCTGCT
GCCGAGGAGCCTAAGAAGTCTCAGGGATTATTCAGCAACCTTGGTGGATTTAATAAGGCT
CCAACCTCATTTGATTTTTTGGCAAATTTGACTAAGGATAGTAAAAGTACTGCCTCACCA
AACACTGAGTCTTCAGGGTTATTTTCAAGTAAATTACCTAATAACCCCAGCAGTCCATTG
GGATCATCACCAATCAACACACCATTGGGTACATCAACATCTCAGACTCCCACACTATTC
AGCAGTGCAACAAGCACAGTCACATTTTCCTCAGTTTTTACAACTACAAAAGCAGGCCCT
TCTGTCTCTGATTCACCCTTCAAGATACAACCAACATTGAGCACTGGAAATGCTATCAGT
TCAAATGCATTCAAAACCAACAGCACTCCAGCTGTTACTGCACAGGTGGCTTCTACTATT
TTTGGAGTACCATCATCCTCAACAAGCAGCAAATCCCTATTTTCCTCAACAAAAAATACT
TCTTCAATTTTTCAAGTGCAGTCTTCTAATACAAGCTCTGCCGCTCCTTCATTAACTCCA
CAGTCTGAAACAGCCACCACACAGGTAACAGAGAAGAAAGAAGAACAAAATGAGAAAAAG
TTGAAATATTATTCTAAATTAAAAGGTCTAAATGAGTCTGTGTCAGAATGGATCAAGAAG
CATGTAGATGAAACACCATTATGTATTTTGACTCCTATATTTAGAGATTATGAAGCATAT
TTGAAAGAAATACAAACAGAATATCATGGTTCTAATACTGATGAAACTAAAACTGAATCC
AAAACTAACAGTAACATAGCCAATCAAATACCTGAGGTAAAAAATCCTGCAGAAAAATCA
AATGGTATTTTTTTCTGATTTTAACAAACCAGCTCAACAAACAACTGGTTCATCATTATT
TAAAATGGATGCCTCTAAACCATTTAGTCAAACTACATCAAGTTCTCCTGTCAGCAGTGC
ATCAAGCAGTTTGTTTGGAGATAAACCAAAAGGATTCTCTTTTGGTATGAACACATCAAC
AAGTACTACAAACACCATTCCAACAACTAGTTCAGGATTTTCTTTTGGAACATTTTCATC
AAATTCAAACAATGGACCAACAAATACTCTCAGTTTTGGAATGAAGTCCAGTTCACCTCT
AGGCAGTTCTCCCCTCAAATTTGGAACTCCATCATTTTCATCAACCACTACAAATAATGA
GGGATCAGGTACTCAAGAAAATCAAGAGGATGAAGATGCTCCTCCAAAAGTAGAATTTAC
TCCAATTGCTGAAGAAAACAGCGTTTTTGATAAGCGCTGTAAAGTTTTTGTGAAGAAAGA
TGGTAATTTTGCTGACAAAGGTGTTGGAACACTTTACATTAAGAAAATTGATAACAGTGA
CAAACACCAATTACTTGTTCGAGCTAATACTACTTTAGGTAATGTACTTCTTAATTTAAG
ACTATCTTCAAGTATACCTACACAAAGAATGGGTAAAAATAATGTTATGATAATTTGCAT
TCCCACCCCTGATTCTAAACCACCTCCAACCTCTGTTTTAATCAGAGTCAAAACATCAGA
AGAAGCAGATGAACTCCTTGAAACATTAAATAAATATAAAGCATAAAGATTGTTATAAAA
AATGATGTTTATAATATTATTACTAAAGTTTTTAGTGATTCATTTTACATAATATAAACT
AATCAGCCAAAAAATACTGTACAGTTTTTTTTAACTCATTGCTACTTTTTACTTTTATTG
ATTGTAATTAAAATGAATGAAAAATTCAGTAGCAACATTTTAAATGTAGCTAAAACCATA
TTAAGG
(2166 bp)

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