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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14975c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:7.21 TPM:7.06
ORF EntryO_TrvaFAMAMG17790_complete:A_TrvaFAMAMG_TR14975c0_g1_i4
Sequence
(Nucleotide)
GCAAAACTGTGAAGCAAAACTTTTAAATTCTTTGAAGAATTTCATTGTGATTTTTGTTTG
TTTGCATTCGTAACTATATAATTCGGATTGTATTAATTTAATCAGCGGAGAAGCATTTTG
ATTGCACTTGAAGAATCCTTAAAATATTATACGTGATTTTACTTTACGTATGAAACTCGT
AAAGTTTCGCCTGTCACATTGAAGTACTGAACCAAATAAAATAGAAACACGAGCGCCAGT
GCACATGATATTTGTTCAAAACTGAATCAAAATGAAATCGAAAAAGAAACATCTTAGTTC
TTCTGAAGAATCTGATGATTCTAATGATAGTGCTAGAAGCAGTTCATCGGAGAGTGAAAG
CGAAGAATCTTCAGCATCAGAACACCGTCATAAGAAGAAAAAAAAGCACGATTCATCTAA
CTCGGAGTCAGAATCTGACGATCAAAAGAGGTCCAAAAAACGTAAACATAAAAAGAAGAA
AAAGAAGCACGGTAAAAAGAAACGACGATCAGATTCTGTAGCAAAACCAAGCAACGACGA
GTTCATATTGAGTGGTAGCGAGGAAAATTCTAAAAAGAAGCGAAAACACAAACACAAGCA
TGCGAAACGCGCCCGAAGTTCTTCAGCTAGTGAATCAGAAGAGGAGAAGACAACTCAACG
TCGTTTACACAGTGTGGTTAAAGAACGTCGACATTCTGTAGAAGAAGTTCATCCAACTCA
TACTTATTACCAGAGGGAATTCAGACGTTCCCCATCAGCAGATGATGCCAGAGAAAGGGA
AGTACAGAGATTCTACAGAGGTTCTAGTAAGGAACGAAGGCAATATCAAGATCATTATGA
TCGACCACCAGAAAGGAATCAAAGATATGAAGAGTTTCGTCGCCCTGAAGAAGGCTATCA
AGTCAAACCCAGAGAGGAAATGTATCATTCCAAACCAGACCCTAGGGGTTATGGCAATAA
CCGTTTTGGACAATATGACCAGAGAAATAAAAGAAGGGATTATGAAGAAGCTGGTGATTA
CAAGGATCGTCGTGGGCAAATCGAGAACGATCGGTTCTACCCCCCACCGCTGCTACCACC
GCGCGACTTTCCGGACAAACGACAATATCAAGAGAAGAGGGACTACCCGAACAAACGCGA
CTTTCAAGACAGACGTGATTACTCCGACAAGCGTGAGAAATACCGCGATGAACCATATCC
TATGGACAGGTAAACACATTTCAGGTCAAATTACTATTATTGTAATGAATTTACTTAAAA
AGTCAGTGCAACATAACTCCAAAATTTTATACTGTAATCATATATTGGCATCAAATTATT
TTACATGTAAATTTGCACTGGCTTTACAGTTGGTCGGTTTCGTTAAATGACTGAATTTGT
TTTTACAGTGCCTACTCTACAGAAAAGTATTACGGTCAGAGCGTGTCGGTGTTACACAGA
TATTTTTACGTTTATCAATTACACGATAAGCACTCTAGGCACATAATATGATTTTATTAA
TCGACTGTGAGACCCATAGAAAAACATTTGATTAACAATGAGGTTGTAACGATTTACTAT
ACCTCACGTGTCTTGTAATATTACTTACACACGGATTGTGTTGCCAGATGTGTATGTAGC
TTGAATTGCAAATTCAAGGTTTAGTACAACACACAACAAGGACATACACTGAAGAAATAT
ATTTATTTGTTATACAACATTTTTCAACAAAGAAGAAATGTTTTTCAAGTACCGAAAAGT
ACAGTTTTCTTCGAGTTTTTAAAAGATAAGAAGCCATTGAATATTGTCAATGTCGTGGAA
TGACAAGACATACCTGTTTATAATGGAAATGTGCGATTTGTAGTCATGTGTTCAGATTTG
TTGATGCTATTTTTCTATTAGATGGTAAATTGAAAAGAATGTTAAAGAGATCAACTAACA
GACGATGGAAATCGTTTTCACTAACAAAAAAGGTTATCAGAGGAAACTGGTGTATGATTG
TAGAATTGTTCAGAAAGGATAACTTGAAGAAGCTGAGTATTTTATACAATTCTCGATAGA
ATGTGATTGGAGATTGTGAATGATTTCTATTTGAGATTCGAAGTTTTGGACCTAACTGAT
AATGAAAGAAAATTAACAGAGAAGTAATTAAAAAAGACTGGACATGTGGACATATTTACC
CAATAAAATCTCTGTATAACAAATTTCTATACTGAAAACCTAACCCTGCGTATGGAAGGA
AATACCTGAGAACTAAAGTAGAACAAAAAAGAAAGGTTATATTAACATAAATTAAAGAAA
AAAGGAGTTAGAGAGTTCTTCACGAATATAAACTCTTGGAAAGTGAATTATAGAATTGAA
AATAATATTGGAAAATGCTTTAATATCAGCATCTTAATCAATGTTATCAACTGTAATTAC
CGAATATACACATAGAAATGTATCTGAAAACAAACTTAATGAATAAAAATAAACTAATAG
AACATCATGTAAGGTGTGTCATCATTACTTTATCTATAAGAAAATCCATGAATGGAATTA
AAAACTTAGCTGTAGTAATTCATATCAACAAAACATCGTATTTTATAAGTAACGGTAAGT
GAAAGATTTACAGGAGTGTACAAATTCGTGCGAAAAGTCGAAGATATAGAATTAAAGTAA
CTACATAACGTTTCAAATTAATTGTGTTCCTGGTGACCAGCACTATTTCTTTCATACTAA
GCTCGATTTTATAAAAAATCGGGAATTTCAATTACAAAACATTCGAGCGCGATAAAAGAA
TATAAATAAAAAAAAATGTTGTGTTCTTTTTCCCGAAATTGGTCTGCTTAGTCATTTTGT
TGAAAGAATGTTCATTAATATGAATGTAATTTTGGTATCCGCAGGGGTCGCGAGCCGCGC
AGAGATAAGCCACCTCCGAGATCTGAGAGACCTCCCATGCCGCAACAGAGGGAACGGTCG
CGGTCCCGCAGCTACGAAGACCGTCCCCGGGAGCGCGGGCGTCGCGCCGACCACTCGCGT
GCCGACCACTCCCGCGACGACGACTCCCGCCACGACGACTCCCGCCGGCCGCACGACGCC
AGGAACGACGAACACAAACCCAAGCCCAGGGAGAGGAAATCTAGATTTGCTGATGCAGAA
GACAACAAAGAGTACAATTGGGGTAAGACGGAAGTCAAGAAAGAAGGCGGAAAGAATCCA
AACGAAAAGGACAAACCAAACTTTGGTCTGTCGGGTAAACTGACGGCCGACGCTAACACA
GTCAACGGTGTTGTTATAAAGTATACGGAGCCAGATGATGCCAAGCAACCTAAACGGAGA
TGGAGGTTCTACCCGTTCAAAGGCGACAAAGCCCTGCCGATACTGTACATTCACCGTCAG
TCCGCGTTCCTGATCGGTCGCGACAAGAAGGTGGTGGACATCTCCCTCGAGCACCCCTCC
ATCAGCAAGCAGCACGCCGCGCTGCAGTACCGCGCCACGCCCTTCACGCGCGCAGACGGC
TCGCAGGGACGCAGGGTCAGACCCTACGTCATCGATCTAGAATCCGCGAACGGCACATTC
GTGAACAACAAGAAGATAGAGCCGCGTCGTTACGTGGAACTGTTGGAGCGTGACGTAGTG
AAGTTTGGTTTCTCTCAGCGCGAGTACGTGCTGCTTCACGAGAACAGTAAGGACGACGCA
CTGGACGATGACCAGCAGGACCCCTCGCTTGTCACCACGGATCATATTAAACACGAGAAG
CGACTCAAACAAGAGGTCGTAGAGGATGGCGAATGAATATTGATTTATGTCGTAAGGTAC
GCTAAAGTAGCGCGCACATACGAACGGGGCAGTACATACATTCAGGTCATGATTTATCCA
AAATGTATCATAACATTTTAGGCGAATAACACTTTGAGGCCAGTCTCATCGTGTTGTCTT
ATGTGCGCGCTCTTTAAGTACAGATACTGTATCGTTTTGGTAGTTTAGTAGTAGATGTAG
TCTATAATATTATTGTTTATAGAGAGATTACAAAAATGATTACTTGTTGAATATTCATGA
TCCATTCTCTTGATGTAAATGTCGTGAAGGATAAGTTTTTTAGAAATAAAAAAAAAATAG
GTGGTACTCTTGTTTACGTGCTTCCCTAATAAATCGTGAAATTTAGAGAGGATTCAAAAT
TGTTGTTACTTCACTATTTGTGGCTACTAAATGGAATGATGACGTCAGAATTCAGTAGTT
AGGTGGTTCTTTATGTTTTAAAGTTAGTATAGGTTAGTTTAATAAAATAACTTTGTTGGT
GACGACACGACGCCGTTTCTTTTTATGTAATTATGGATTTATGCATAGAACAATTTCGGT
GCAACCTTTTTTTTTAATTTTTACGTTGAACTTTTTAACAGCACAAAACCATGTGGTTGT
TTGTTTTCTAGAAGTGATTTTTTTCTATGCAAAATCAGATTCAGATCTTTGAGATTTAAT
CAAGGTTTTATGTTAGAGAAAATCATATGTCTGCTTGACATTAAGTAAAGGTAGAATTTT
AAATAAAATAATTATTATAGATAAAAAAAAA
(4531 bp)

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