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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14975c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:2.56 TPM:2.51
ORF EntryO_TrvaFAMAMG17785_complete:A_TrvaFAMAMG_TR14975c0_g1_i3
Sequence
(Nucleotide)
CATTATGATCGACCACCAGAAAGATTTACTCCCTACAATCAGGACCATTTTGACAATAAG
AACAGATACAATCAACAATTACAACAAAGTCAGTTTGATCATAGTGGCGGAAGAGAACGA
AATTTTAATCAAAATAGAAGGAATCAAAGATATGAAGAGTTTCGTCGCCCTGAAGAAGGC
TATCAAGTCAAACCCAGAGAGGAAATGTATCATTCCAAACCAGACCCTAGGGGTTATGGC
AATAACCGTTTTGGACAATATGACCAGAGAAATAAAAGAAGGGATTATGAAGAAGCTGGT
GATTACAAGGATCGTCGTGGGCAAATCGAGAACGATCGGTTCTACCCCCCACCGCTGCTA
CCACCGCGCGACTTTCCGGACAAACGACAATATCAAGAGAAGAGGGACTACCCGAACAAA
CGCGACTTTCAAGACAGACGTGATTACTCCGACAAGCGTGAGAAATACCGCGATGAACCA
TATCCTATGGACAGGTAAACACATTTCAGGTCAAATTACTATTATTGTAATGAATTTACT
TAAAAAGTCAGTGCAACATAACTCCAAAATTTTATACTGTAATCATATATTGGCATCAAA
TTATTTTACATGTAAATTTGCACTGGCTTTACAGTTGGTCGGTTTCGTTAAATGACTGAA
TTTGTTTTTACAGTGCCTACTCTACAGAAAAGTATTACGGTCAGAGCGTGTCGGTGTTAC
ACAGATATTTTTACGTTTATCAATTACACGATAAGCACTCTAGGCACATAATATGATTTT
ATTAATCGACTGTGAGACCCATAGAAAAACATTTGATTAACAATGAGGTTGTAACGATTT
ACTATACCTCACGTGTCTTGTAATATTACTTACACACGGATTGTGTTGCCAGATGTGTAT
GTAGCTTGAATTGCAAATTCAAGGTTTAGTACAACACACAACAAGGACATACACTGAAGA
AATATATTTATTTGTTATACAACATTTTTCAACAAAGAAGAAATGTTTTTCAAGTACCGA
AAAGTACAGTTTTCTTCGAGTTTTTAAAAGATAAGAAGCCATTGAATATTGTCAATGTCG
TGGAATGACAAGACATACCTGTTTATAATGGAAATGTGCGATTTGTAGTCATGTGTTCAG
ATTTGTTGATGCTATTTTTCTATTAGATGGTAAATTGAAAAGAATGTTAAAGAGATCAAC
TAACAGACGATGGAAATCGTTTTCACTAACAAAAAAGGTTATCAGAGGAAACTGGTGTAT
GATTGTAGAATTGTTCAGAAAGGATAACTTGAAGAAGCTGAGTATTTTATACAATTCTCG
ATAGAATGTGATTGGAGATTGTGAATGATTTCTATTTGAGATTCGAAGTTTTGGACCTAA
CTGATAATGAAAGAAAATTAACAGAGAAGTAATTAAAAAAGACTGGACATGTGGACATAT
TTACCCAATAAAATCTCTGTATAACAAATTTCTATACTGAAAACCTAACCCTGCGTATGG
AAGGAAATACCTGAGAACTAAAGTAGAACAAAAAAGAAAGGTTATATTAACATAAATTAA
AGAAAAAAGGAGTTAGAGAGTTCTTCACGAATATAAACTCTTGGAAAGTGAATTATAGAA
TTGAAAATAATATTGGAAAATGCTTTAATATCAGCATCTTAATCAATGTTATCAACTGTA
ATTACCGAATATACACATAGAAATGTATCTGAAAACAAACTTAATGAATAAAAATAAACT
AATAGAACATCATGTAAGGTGTGTCATCATTACTTTATCTATAAGAAAATCCATGAATGG
AATTAAAAACTTAGCTGTAGTAATTCATATCAACAAAACATCGTATTTTATAAGTAACGG
TAAGTGAAAGATTTACAGGAGTGTACAAATTCGTGCGAAAAGTCGAAGATATAGAATTAA
AGTAACTACATAACGTTTCAAATTAATTGTGTTCCTGGTGACCAGCACTATTTCTTTCAT
ACTAAGCTCGATTTTATAAAAAATCGGGAATTTCAATTACAAAACATTCGAGCGCGATAA
AAGAATATAAATAAAAAAAAATGTTGTGTTCTTTTTCCCGAAATTGGTCTGCTTAGTCAT
TTTGTTGAAAGAATGTTCATTAATATGAATGTAATTTTGGTATCCGCAGGGGTCGCGAGC
CGCGCAGAGATAAGCCACCTCCGAGATCTGAGAGACCTCCCATGCCGCAACAGAGGGAAC
GGTCGCGGTCCCGCAGCTACGAAGACCGTCCCCGGGAGCGCGGGCGTCGCGCCGACCACT
CGCGTGCCGACCACTCCCGCGACGACGACTCCCGCCACGACGACTCCCGCCGGCCGCACG
ACGCCAGGAACGACGAACACAAACCCAAGCCCAGGGAGAGGAAATCTAGATTTGCTGATG
CAGAAGACAACAAAGAGTACAATTGGGGTAAGACGGAAGTCAAGAAAGAAGGCGGAAAGA
ATCCAAACGAAAAGGACAAACCAAACTTTGGTCTGTCGGGTAAACTGACGGCCGACGCTA
ACACAGTCAACGGTGTTGTTATAAAGTATACGGAGCCAGATGATGCCAAGCAACCTAAAC
GGAGATGGAGGTTCTACCCGTTCAAAGGCGACAAAGCCCTGCCGATACTGTACATTCACC
GTCAGTCCGCGTTCCTGATCGGTCGCGACAAGAAGGTGGTGGACATCTCCCTCGAGCACC
CCTCCATCAGCAAGCAGCACGCCGCGCTGCAGTACCGCGCCACGCCCTTCACGCGCGCAG
ACGGCTCGCAGGGACGCAGGGTCAGACCCTACGTCATCGATCTAGAATCCGCGAACGGCA
CATTCGTGAACAACAAGAAGATAGAGCCGCGTCGTTACGTGGAACTGTTGGAGCGTGACG
TAGTGAAGTTTGGTTTCTCTCAGCGCGAGTACGTGCTGCTTCACGAGAACAGTAAGGACG
ACGCACTGGACGATGACCAGCAGGACCCCTCGCTTGTCACCACGGATCATATTAAACACG
AGAAGCGACTCAAACAAGAGGTCGTAGAGGATGGCGAATGAATATTGATTTATGTCGTAA
GGTACGCTAAAGTAGCGCGCACATACGAACGGGGCAGTACATACATTCAGGTCATGATTT
ATCCAAAATGTATCATAACATTTTAGGCGAATAACACTTTGAGGCCAGTCTCATCGTGTT
GTCTTATGTGCGCGCTCTTTAAGTACAGATACTGTATCGTTTTGGTAGTTTAGTAGTAGA
TGTAGTCTATAATATTATTGTTTATAGAGAGATTACAAAAATGATTACTTGTTGAATATT
CATGATCCATTCTCTTGATGTAAATGTCGTGAAGGATAAGTTTTTTAGAAATAAAAAAAA
AATAGGTGGTACTCTTGTTTACGTGCTTCCCTAATAAATCGTGAAATTTAGAGAGGATTC
AAAATTGTTGTTACTTCACTATTTGTGGCTACTAAATGGAATGATGACGTCAGAATTCAG
TAGTTAGGTGGTTCTTTATGTTTTAAAGTTAGTATAGGTTAGTTTAATAAAATAACTTTG
TTGGTGACGACACGACGCCGTTTCTTTTTATGTAATTATGGATTTATGCATAGAACAATT
TCGGTGCAACCTTTTTTTTTAATTTTTACGTTGAACTTTTTAACAGCACAAAACCATGTG
GTTGTTTGTTTTCTAGAAGTGATTTTTTTCTATGCAAAATCAGATTCAGATCTTTGAGAT
TTAATCAAGGTTTTATGTTAGAGAAAATCATATGTCTGCTTGACATTAAGTAAAGGTAGA
ATTTTAAATAAAATAATTATTATAGATAAAAAAAAA
(3816 bp)

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