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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14975c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:1.82 TPM:1.78
ORF EntryO_TrvaFAMAMG17783_5prime_partial:A_TrvaFAMAMG_TR14975c0_g1_i2
Sequence
(Nucleotide)
CATTATGATCGACCACCAGAAAGATTTACTCCCTACAATCAGGACCATTTTGACAATAAG
AACAGATACAATCAACAATTACAACAAAGTCAGTTTGATCATAGTGGCGGAAGAGAACGA
AATTTTAATCAAAATAGAAGGAATCAAAGATATGAAGAGTTTCGTCGCCCTGAAGAAGGC
TATCAAGTCAAACCCAGAGAGGAAATGTATCATTCCAAACCAGACCCTAGGGGTTATGGC
AATAACCGTTTTGGACAATATGACCAGAGAAATAAAAGAAGGGATTATGAAGAAGCTGGT
GATTACAAGGATCGTCGTGGGCAAATCGAGAACGATCGGTTCTACCCCCCACCGCTGCTA
CCACCGCGCGACTTTCCGGACAAACGACAATATCAAGAGAAGAGGGACTACCCGAACAAA
CGCGACTTTCAAGACAGACGTGATTACTCCGACAAGCGTGAGAAATACCGCGATGAACCA
TATCCTATGGACAGGGGTCGCGAGCCGCGCAGAGATAAGCCACCTCCGAGATCTGAGAGA
CCTCCCATGCCGCAACAGAGGGAACGGTCGCGGTCCCGCAGCTACGAAGACCGTCCCCGG
GAGCGCGGGCGTCGCGCCGACCACTCGCGTGCCGACCACTCCCGCGACGACGACTCCCGC
CACGACGACTCCCGCCGGCCGCACGACGCCAGGAACGACGAACACAAACCCAAGCCCAGG
GAGAGGAAATCTAGATTTGCTGATGCAGAAGACAACAAAGAGTACAATTGGGGTAAGACG
GAAGTCAAGAAAGAAGGCGGAAAGAATCCAAACGAAAAGGACAAACCAAACTTTGGTCTG
TCGGGTAAACTGACGGCCGACGCTAACACAGTCAACGGTGTTGTTATAAAGTATACGGAG
CCAGATGATGCCAAGCAACCTAAACGGAGATGGAGGTTCTACCCGTTCAAAGGCGACAAA
GCCCTGCCGATACTGTACATTCACCGTCAGTCCGCGTTCCTGATCGGTCGCGACAAGAAG
GTGGTGGACATCTCCCTCGAGCACCCCTCCATCAGCAAGCAGCACGCCGCGCTGCAGTAC
CGCGCCACGCCCTTCACGCGCGCAGACGGCTCGCAGGGACGCAGGGTCAGACCCTACGTC
ATCGATCTAGAATCCGCGAACGGCACATTCGTGAACAACAAGAAGATAGAGCCGCGTCGT
TACGTGGAACTGTTGGAGCGTGACGTAGTGAAGTTTGGTTTCTCTCAGCGCGAGTACGTG
CTGCTTCACGAGAACAGTAAGGACGACGCACTGGACGATGACCAGCAGGACCCCTCGCTT
GTCACCACGGATCATATTAAACACGAGAAGCGACTCAAACAAGAGGTCGTAGAGGATGGC
GAATGAATATTGATTTATGTCGTAAGGTACGCTAAAGTAGCGCGCACATACGAACGGGGC
AGTACATACATTCAGGTCATGATTTATCCAAAATGTATCATAACATTTTAGGCGAATAAC
ACTTTGAGGCCAGTCTCATCGTGTTGTCTTATGTGCGCGCTCTTTAAGTACAGATACTGT
ATCGTTTTGGTAGTTTAGTAGTAGATGTAGTCTATAATATTATTGTTTATAGAGAGATTA
CAAAAATGATTACTTGTTGAATATTCATGATCCATTCTCTTGATGTAAATGTCGTGAAGG
ATAAGTTTTTTAGAAATAAAAAAAAAATAGGTGGTACTCTTGTTTACGTGCTTCCCTAAT
AAATCGTGAAATTTAGAGAGGATTCAAAATTGTTGTTACTTCACTATTTGTGGCTACTAA
ATGGAATGATGACGTCAGAATTCAGTAGTTAGGTGGTTCTTTATGTTTTAAAGTTAGTAT
AGGTTAGTTTAATAAAATAACTTTGTTGGTGACGACACGACGCCGTTTCTTTTTATGTAA
TTATGGATTTATGCATAGAACAATTTCGGTGCAACCTTTTTTTTTAATTTTTACGTTGAA
CTTTTTAACAGCACAAAACCATGTGGTTGTTTGTTTTCTAGAAGTGATTTTTTTCTATGC
AAAATCAGATTCAGATCTTTGAGATTTAATCAAGGTTTTATGTTAGAGAAAATCATATGT
CTGCTTGACATTAAGTAAAGGTAGAATTTTAAATAAAATAATTATTATAGATAAAAAAAA
A
(2161 bp)

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