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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14975c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:10.73 TPM:10.51
ORF EntryO_TrvaFAMAMG17781_complete:A_TrvaFAMAMG_TR14975c0_g1_i1
Sequence
(Nucleotide)
GCAAAACTGTGAAGCAAAACTTTTAAATTCTTTGAAGAATTTCATTGTGATTTTTGTTTG
TTTGCATTCGTAACTATATAATTCGGATTGTATTAATTTAATCAGCGGAGAAGCATTTTG
ATTGCACTTGAAGAATCCTTAAAATATTATACGTGATTTTACTTTACGTATGAAACTCGT
AAAGTTTCGCCTGTCACATTGAAGTACTGAACCAAATAAAATAGAAACACGAGCGCCAGT
GCACATGATATTTGTTCAAAACTGAATCAAAATGAAATCGAAAAAGAAACATCTTAGTTC
TTCTGAAGAATCTGATGATTCTAATGATAGTGCTAGAAGCAGTTCATCGGAGAGTGAAAG
CGAAGAATCTTCAGCATCAGAACACCGTCATAAGAAGAAAAAAAAGCACGATTCATCTAA
CTCGGAGTCAGAATCTGACGATCAAAAGAGGTCCAAAAAACGTAAACATAAAAAGAAGAA
AAAGAAGCACGGTAAAAAGAAACGACGATCAGATTCTGTAGCAAAACCAAGCAACGACGA
GTTCATATTGAGTGGTAGCGAGGAAAATTCTAAAAAGAAGCGAAAACACAAACACAAGCA
TGCGAAACGCGCCCGAAGTTCTTCAGCTAGTGAATCAGAAGAGGAGAAGACAACTCAACG
TCGTTTACACAGTGTGGTTAAAGAACGTCGACATTCTGTAGAAGAAGTTCATCCAACTCA
TACTTATTACCAGAGGGAATTCAGACGTTCCCCATCAGCAGATGATGCCAGAGAAAGGGA
AGTACAGAGATTCTACAGAGGTTCTAGTAAGGAACGAAGGCAATATCAAGATCATTATGA
TCGACCACCAGAAAGGAATCAAAGATATGAAGAGTTTCGTCGCCCTGAAGAAGGCTATCA
AGTCAAACCCAGAGAGGAAATGTATCATTCCAAACCAGACCCTAGGGGTTATGGCAATAA
CCGTTTTGGACAATATGACCAGAGAAATAAAAGAAGGGATTATGAAGAAGCTGGTGATTA
CAAGGATCGTCGTGGGCAAATCGAGAACGATCGGTTCTACCCCCCACCGCTGCTACCACC
GCGCGACTTTCCGGACAAACGACAATATCAAGAGAAGAGGGACTACCCGAACAAACGCGA
CTTTCAAGACAGACGTGATTACTCCGACAAGCGTGAGAAATACCGCGATGAACCATATCC
TATGGACAGGGGTCGCGAGCCGCGCAGAGATAAGCCACCTCCGAGATCTGAGAGACCTCC
CATGCCGCAACAGAGGGAACGGTCGCGGTCCCGCAGCTACGAAGACCGTCCCCGGGAGCG
CGGGCGTCGCGCCGACCACTCGCGTGCCGACCACTCCCGCGACGACGACTCCCGCCACGA
CGACTCCCGCCGGCCGCACGACGCCAGGAACGACGAACACAAACCCAAGCCCAGGGAGAG
GAAATCTAGATTTGCTGATGCAGAAGACAACAAAGAGTACAATTGGGGTAAGACGGAAGT
CAAGAAAGAAGGCGGAAAGAATCCAAACGAAAAGGACAAACCAAACTTTGGTCTGTCGGG
TAAACTGACGGCCGACGCTAACACAGTCAACGGTGTTGTTATAAAGTATACGGAGCCAGA
TGATGCCAAGCAACCTAAACGGAGATGGAGGTTCTACCCGTTCAAAGGCGACAAAGCCCT
GCCGATACTGTACATTCACCGTCAGTCCGCGTTCCTGATCGGTCGCGACAAGAAGGTGGT
GGACATCTCCCTCGAGCACCCCTCCATCAGCAAGCAGCACGCCGCGCTGCAGTACCGCGC
CACGCCCTTCACGCGCGCAGACGGCTCGCAGGGACGCAGGGTCAGACCCTACGTCATCGA
TCTAGAATCCGCGAACGGCACATTCGTGAACAACAAGAAGATAGAGCCGCGTCGTTACGT
GGAACTGTTGGAGCGTGACGTAGTGAAGTTTGGTTTCTCTCAGCGCGAGTACGTGCTGCT
TCACGAGAACAGTAAGGACGACGCACTGGACGATGACCAGCAGGACCCCTCGCTTGTCAC
CACGGATCATATTAAACACGAGAAGCGACTCAAACAAGAGGTCGTAGAGGATGGCGAATG
AATATTGATTTATGTCGTAAGGTACGCTAAAGTAGCGCGCACATACGAACGGGGCAGTAC
ATACATTCAGGTCATGATTTATCCAAAATGTATCATAACATTTTAGGCGAATAACACTTT
GAGGCCAGTCTCATCGTGTTGTCTTATGTGCGCGCTCTTTAAGTACAGATACTGTATCGT
TTTGGTAGTTTAGTAGTAGATGTAGTCTATAATATTATTGTTTATAGAGAGATTACAAAA
ATGATTACTTGTTGAATATTCATGATCCATTCTCTTGATGTAAATGTCGTGAAGGATAAG
TTTTTTAGAAATAAAAAAAAAATAGGTGGTACTCTTGTTTACGTGCTTCCCTAATAAATC
GTGAAATTTAGAGAGGATTCAAAATTGTTGTTACTTCACTATTTGTGGCTACTAAATGGA
ATGATGACGTCAGAATTCAGTAGTTAGGTGGTTCTTTATGTTTTAAAGTTAGTATAGGTT
AGTTTAATAAAATAACTTTGTTGGTGACGACACGACGCCGTTTCTTTTTATGTAATTATG
GATTTATGCATAGAACAATTTCGGTGCAACCTTTTTTTTTAATTTTTACGTTGAACTTTT
TAACAGCACAAAACCATGTGGTTGTTTGTTTTCTAGAAGTGATTTTTTTCTATGCAAAAT
CAGATTCAGATCTTTGAGATTTAATCAAGGTTTTATGTTAGAGAAAATCATATGTCTGCT
TGACATTAAGTAAAGGTAGAATTTTAAATAAAATAATTATTATAGATAAAAAAAAA
(2876 bp)

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