SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14547c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		AGO3_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0005845 C mRNA cap binding complex
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0033391 C chromatoid body
GO:0034584 F piRNA binding
GO:0034587 P piRNA metabolic process
GO:0043186 C P granule
GO:0051321 P meiotic cell cycle
GO:0097433 C dense body
Transcript
Level		FPKM:0.36 TPM:0.35
ORF EntryO_TrvaFAMAMG17443_5prime_partial:A_TrvaFAMAMG_TR14547c0_g1_i1
Sequence
(Nucleotide)
TAAGTTGTATTTCGACAGATCATTCACCCCACTTCAGCTGAGAAGTTAAAGATCCACCCT
GTATAACAATTTATATTTCTTGAAATACAAGTCTCTTATAAAAAAAAACAACAATTTTGA
AACCCAAAAAATCTAACTTAAAAATCGACTCTATTACTCTACACTTAAGGTCTAAAAAAA
CTATAAAAAGAACAACTTATCTATTAACACATCCGATGGTTCCGCATGCACACATTGTCC
CACCAAATATGCCAGTTTATGCGCATACTGGCAAGGAGCTGGCACTCTCACCGTGCCAGG
CCAGTTGTAGTACAAATGACACATTTTATATGTCAAACGTTGACACTGATCAGGTGTCAT
GCCGCTGTCATCGTAAACTACGACGTAATGGGTCGGTGTTACTGTTCCTTGGTTCACTTT
TTGCGAGGCGATCAAGAAATCGTACCAATCGCGTCTAGTAATATCATGATCGACAACCGT
TCCCGGATTAGGATTTTCGTAGCCGCCATTAGCTTTTAGAAATATACGAGTATTTATACG
TTTTTGTACGACAATGTAAGTTAAGGAGGGCTTGTAGTCTGTTCCGACGATTGAGAACGA
AATCTTCATTTGCGGTATTTCGTAACTCTGTAATAGTTTCAATTGACCGTCGCCGACGCC
GTCTCTGTATATAATAATTCTATCCGGAAGTTGACCATTCGATCTCATGTAATGATTCAA
TGCGCTTATGAGACAAGACTTCAAACCATCGACAATTTCTTGACCTTTTTCTTGGAATAT
CGCTTTTGAGTACCAGAGAGTCATGCTTTGATTATATGAAGCTACAAAACTGCAAACACT
TCTTTGCCGTCTCGTCGGATCGTGGTAGGAATCAATACCGATGATCATAGCACTTTTGAG
TACCAG
(906 bp)

- SilkBase 1999-2023 -