SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14405c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_CCCH_domain-containing_protein_11A-like_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:5.19 TPM:5.08
ORF EntryO_TrvaFAMAMG17439_complete:A_TrvaFAMAMG_TR14405c0_g1_i1
Sequence
(Nucleotide)
AAAATTTGCTCGAGTGCAGATTGGCCAAACAAGCACTGAGGCGACGATTTATTATAGGCT
CGACCTAATGCACCATTATTATAGATGAAGAAAATTGGTAAATAAAACCGTTTAAATAAA
CTTGTCATACATCCTTCTGTATCAATTCAAGTACAAATCACTATTTATAGAGTGTCGTCG
GGCTAGTCCCACAGCGAGGGTCGGCAGGGGGCTTAGTACATGTAATTTCAGTAGAGTCTC
ATACCTTCGTCGAAGTTGACGACGAGGGGGTCCACCGGCAGCGGCGCGAACGGAGCGCCC
GACTCGTGGCGCGGCACGCCCAGCAGCGCGCTGTCCAGGACAACTTGTCTCTGTTGTTGC
CAAAGCAGTGGTACAGGCGCGGGCACTGCGGGCGGCGGCACTCCCGGCATCGGGGGCTGC
TCCACCACACTCTCATTCAGACATGGATGGACAGGCGGAGCTGGTTGACTAGGCGCGATC
CCATCGGTGCGTGCTTCAGGGTTCTTGTGCATGAACGGGCAGTGGATCTTACGACAGCCG
CCGGGCTGGTTCTCCCAATAGCAGGGAATTTGTTTACGGTTTTTCCTAAGTTCCATGTGA
CGTAGTTTGCATCGTTTGTCGAGACATTTCCCCTGTTGCCAGGCCGTGCACATAGTCTCA
CAGCCCAAGGCTGATGGCTCATGGCGAAACACACAGTTATCTCCCTTAGTACATGTGGAG
TAGTAATAAAAGTAACAATCGTTGAATTTACGTGGAGACTCCATGGTGTTTTATCGCTGT
CTCGATTCGTGAATTTATTTAGTTAAAATTAACCTATAATTCGCGAAATTAATTAATTAA
AAACAACAATTTATAAAACACAAAATTATTTAAACGTCACTACGAGATGGAAGATGTGGT
ATTATGGCGGATGGCGG
(917 bp)

- SilkBase 1999-2023 -