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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14285c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_TRC8_homolog_[Amyelois_transitella]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007418 P ventral midline development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:30.78 TPM:30.16
ORF EntryO_TrvaFAMAMG17347_complete:A_TrvaFAMAMG_TR14285c0_g1_i1
Sequence
(Nucleotide)
GTCAGCAACAGGGCAACATCTAAATTTGAAACGTCAAATTTTTATTGTCGCAAAAATTTC
AGTCATTATTTATCGTAAAATAATTTACGTGCAAAAATAACAAGAAAACATACGTTTTGG
TCTAGCTGTTTCGAATAAACTATTAAATCTATGTCGCCATATGCAGCGCGTGACTTTCGT
TGCGTTTACGCTGTCAGTGTGAAACAGAGTGTTATTGGCCGTATAAATGAATAATGTCGC
TGAGGTTGAAGGCCCTAGCACTGGTGGAGGTGCTACTCAGGGTGCCCCCGTTGTTTGTGG
TGGATGAGTTCCTGAAAATCAGCCTCGGGCTGCCGGTATCAAGTGCCGAAGAAGTTTCAG
TACTTAGCAATGTCACGGTGGACCACGTCGATATTTTGGAGCCAGATGTGAATTATTACG
ATGCCAACTTCTACAATGCGTTTTTCGTCACGTTTTTCAAATTCCTCGTCTGTTGTTCAG
GATGTTTATCTTCACTCTGCGTGTTCGTCCTGTACGCGAAGCATCTCATCATCGTGTACC
TTTACCTCACATCTCTTGGCATCGTGTTTGTCTCATACTGGACAAATGTATCAGCAATCA
AACAGATACAGGCCCTGACACAACTGGCCACCTCACAACACCATTCGTCCAGCATACTAG
AAGATATTCTTAATTTAAATATTAAAAATTTACTTGATCTCGATGGACCGGGCATATTGG
TGATACAAAACTTCGCGATACAATTCGTTTTGGCTATTGTGTTCAGAAATGTGCACCTCG
GGCCTAGAGTCCCTATTATCCAAAAGATGATCCCTGTTAGTTTTATGGCCCCTTCGTTTT
TAGCAATGCTGCCTATGCCACCCAATCTTTTGCACCACTCACCAGTATTTGCATCTTTGT
TACCATTGCTTCTTGTTAAATATGTGTTAGGTTCTTCTACATATACTATTATTCATGTTA
TTTATGCTGGTTACCAGCATGGTCGACTTTTCGTGAGCAACTACGGCCTGTCCGCTTTGG
TCGAAACAGAATGGATGCGTCTCAATGTGCCCTGTGTTTTGAGAGTTTTCTGGGTGTTGC
GAGTCGCTGAACATGCTATCCTATTGTTAATGGATAACTATGACGAGGACACGGAAGAAG
GTGTCCGAATATCGACCTTGTTGGCCGTGCAGTCGCTGGCGTCAATGGCCAAATCATTGT
TAGTGACCGGCTGTGAAACTATTACAGCGGTTTTAGGAATGACTTCAGTGATCTCATTTT
TCTGTCATTACATTGGAAACTTCTTCCAATGGATTCTGTTGACCGACGAGGAAGAAGACA
AGAGTATCGGAACGGTATCAGCGATTCTGTTTTACATTTTAGCTCTTCAGACTGGGTTAA
CTTCTTTACACCCCGAAAAGAGATTTATCCGTCTCTGCAGAAACTTCTGTTTGTTGTTCA
CGGCACTATTACATTTTCTGCACAATATCGTCAATCCTATGTTGATGTCTCTAAGCGCTT
CGCATAACCCGAGCACTCACAGGCACGTTAGGGCACTAGGGGTTTGCGCATTTTTAATTA
TATTCCCGATATCTTTACTAGTGTATTTGTGGTCACAGCACAGCGTGTCCACATGGCTTC
TAGCTGTTAGCGCATTCAGCATAGAGGTCATAGTCAAAGTAATTGTAAGTCTCATGATAT
ACTCACTGTTCCTGATAGACGCGTACAGGAGCACGTTCTGGGAACAACTGGACGACTACG
TTTACTACATACGCGCCTTCGGGAACACGATAGAGTTCTGTTTCGGGATATTCTTATTTT
TCAACGGTGCCTGGATTCTGCTGTTTGAATCAGGAGGCGCTATAAGAGCGGTCATGATGT
GCATACATGCTTATTTCAATATATGGTGCGAAGCCAGAGCCGGCTGGTCCGTGTTCATGA
AGAGACGCACCGCAGTCAACAAAATCAATTCGCTGAAAGAGGCTTCATACGATCAGCTGA
GTAATCTGGACGACGTGTGCGCTATTTGCTATCAGGAGATGCACTCGGCCAAGATTACCC
GCTGCAATCACTTCTTCCACGGCGTCTGCCTGCGGAAGTGGTTGTATGTCCAAGACAGAT
GTCCGTTGTGTCACGACATTCTGTACAAAATCGACAGCGACACAAATAAAGACTCAAATT
CTGATGCCGAAGTTGAGGAGAACAGTAACAATCAGAATCATTTGTTAGAGGAGGAGCCCG
ACCTTCTCATGGGCGAGGAGGTCAGGTGACTTCCAGAATAGTCCGTAAAATTTATTATTT
TTATAGCGTAATTTAATTAAACATTTGTGTGGTATTCTTTCGACTTGTATAGTAAGTTAT
TGTTTTTTTTTTGATGTTTCTAAACGGTGCAACTGTGATTTAAGGTTTTATAATTTCGTG
ATAGTTGTGTGTTGGACTTTTAGTGGCCTTCGGAGTTCCCCCAAATGTACAAGTGAAAAG
TTACTAGTTTTGGTATATAACATAATGCAACATATATTTCTATAAATGTTTATGAAACAT
TACTAAATGTGCATGTGCAGAAATTTTTATGACAAAAGTACATTCTAGTTGACTATTTGG
AAACGAGTTTATGGAATAAAAATAGTAATTTTTCATAAAAAAAATTGTAAATAAAACTTT
ATTTTAGTAAAAAAAAACAAAAA
(2663 bp)

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