SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14284c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_nuclear_export_factor_CRM1_[Danaus_plexippus]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:21.85 TPM:21.41
ORF EntryO_TrvaFAMAMG17346_complete:A_TrvaFAMAMG_TR14284c0_g1_i1
Sequence
(Nucleotide)
AGACAATGTGTATAAGCTTTTTCAAGCTTCATGAAAACAACGGATTAGTATGTATGGTAG
TGCGTTAGATTGATTGCGCCGCAAATAATTTTCTCGGTGTTATACATGGTGAGGAATGAA
TGTGGATTAATTTTAGAAAAATTGGTTTATAAAAAAGGGAACAAGAAATTGAAGTAAGAT
TTGAAAAAAATGGCAACCTTAGAACAACAGGCATCTAAACTCCTGGATTTCAACCAAAAA
CTGGATATAAATTTATTGGATAACATTGTTGGATGTTTATATTCAACTGTGGGGGATCAA
CAACGCGTAGCTCAGGATATACTAACTGCTTTGAAAGAGCATCCTGATGCTTGGACTCGT
GTTGATACTATACTGGAATATTCTCAAAATCAAGAAACTAAATATTATGCTTTACAAATA
TTAGAACAAGTTATACAAACAAGATGGAAAATATTACCCAGAAATCAATGTGAGGGTATC
AAAAAATATATTGTTGGACTTATTATAAAAAATTCATCAGACCCAGCTACGATGGAAAGC
AACAAAGTGTATTTGAAAAAATTAAACATGATTCTGATCCAAGTCCTGAAAAGAGAATGG
CCCCATAACTGGGAAACTTTTATAAGTGACATAGTGGGTGCTTCAAAAACCAATGAAAGC
CTCTGCCAAAACAATATGGAAATATTGAAATTACTAAGCGAAGAAGTTTTCATGTTTAGT
ACAGGTCAGCTCACCCAAACAAAAGCCAAACATTTGAAGGATACAATGTGTTCGGAATTC
AGTCAAATATTCCAACTATGCCAGTTTGTCTTGGAAAATTCACAGAACGCACCTTTAGTT
GGAGTGACCCTGGATACTCTTCTAAGATTTTTAAACTGGATCCCGCTTGGTTATATATTT
GAGATGAAGCTGATAAGCACCTTGATTTTTAAATTCTTGAATGTTCCCATGTTCAGAAAT
GTTACTTTAAGCTGTCTCACTGAGATTGCTGGTGTGACAGTCAGTAATTATGAAGAACAA
TTCATATATTTGTTTGTACAAACAATGGAACAACTCGAAGCCATGCTCCCACTCACTACA
AACATTCGGGAGGCATATTCAGCTGGTCGTGATCAAGAACAGGTGTTTATACAAAATCTA
GCACTTTTCTTGTGCACATACCTGAAAGAACATGGAGCACTCATAGAAAAAAGTGGACTC
ACAAACACTTTGATGAATGGTTTAAGATATCTTGTCTTGATATCTGAAGTAGAGGATGTA
GAAATCTTCAAAATTTGTCTAGAGTATTGGAATGCTCTGGCTGCTGATTTGTATAAAATA
GCTCCATGTTCGTCAGGCTTGTACAATTTGGGTAAAAGTGTGGGTAGAAAAGCATTGTAT
GCTGATGTCTTAAGCAGTGTTCGTTACATAATGATCTCCAGAATGGCAAAACCAGAAGAG
GTATTAGTTGTGGAAAATGAAAATGGTGAAGTTGTGCGGGAATTCATGAAGGATACAGAT
TCCATTAATTTATACAAAAACATGAGAGAGACATTAGTTTACTTGACACATTTGGACTAC
TTAGATACTGAACGTATTATGACAGAAAAGTTGCAAAATCAAGTAAATGGTAGTGAGTGG
TCATGGAAAAACTTGAACACACTCTGTTGGGCTATTGGATCTATATCTGGAGCGTTGTCG
GAAGATGATGAAAAAAGATTTCTTGTGATAGTTATAAAAGAGCTTCTAGGACTGTGTGAA
CAAAAGAAAGGGAAAGACAACAAAGCTATAATTGCTAGTAATATCATGTATGTTGTTGGA
CAGTATCCACGATTTCTTCGTGCCCATTGGAAATTTTTAAAAACAGTTGTTAATAAATTA
TTTGAATTTATGCATGAAACTCATGATGGTGTTCAAGATATGGCTTGTGACACCTTTATA
AAAATTGCTATTAAATGTCGCAGACATTTTGTGACAACACAAGTTGGGGAAGCCTGTCCT
TTTATTGAGGAAATATTGAGCACTATCAGTACTATAATTTGTGACTTACAAACATTACAA
GTGCACACCTTTTATGAAGCTGTTGGATACATGATCAGTGCCCAAGTGGACCAAGTGGCT
CAAGAATTACTTATTGAAAAATATATGCTGCTGCCTAATCAAGTTTGGGATGATATTATA
TCACAAGCTTCTCATAATGTTGAAATTCTAAAAGATCCAGAAGCTGTTAAACAGCTTGTA
AGCATACTTAAAACGAATGTGCGTGCATGTCGTGCACTGGCACACCCTTATGTAGTTCAG
TTAGGTAGAATATACCTTGATATGCTTAATGTTTACAAAGTTATGTCTGAGAACATAAGT
CATGCTATTGCTCTCAATGGTGTAGCAGTTACTAAACAACCTCTTATTAAGAATATGAGA
ATAATTAAAAAGGAAACTCTTAACCTTATTGCAAGCTGGGTTTCACGTTCCACAGACAAC
AGCATGGTTTTGGAAAACTTTATTCCCCCTCTTCTTGATGCTGTGCTTTTGGATTATCAA
AGAACAGCTGTCCCTGATGCTCGTGAGCCAGAGGTGTTATCCTGCATGGCAGCTATAGTT
CACAGGCTTGGAGGACATATTACTTCTGAAGTTCCAAAAATTTTTGATGCAGTTTTTGAA
TGTACACTTGAAATGATAAATAAAGACTTTGAAGTATATCCTGAACACAGAACTGAATTT
TTCCTATTGCTGCAAGCTGTGAATACAAATTGCTTCAAAGCATTCTTGAGTATACCACCA
GCACAATTCAAGTTGGTTTTGGATTCTATTATTTGGGCATTTAAACACACAATGAGGAAT
GTTGCAGACACTGGTTTACAAATACTGTACAGGTTGTTGCTGAATGTTGAAGAACATTCA
CAGGCAGCACAGAGCTTTTATAGAACATACCTATGTGACATCTTGGAACATGTCTTCAGT
GTGGTGACTGATACATCACATGGTGCAGGACTTACCATGCATGCAACAATCTTGGCACAC
ATTTTCTCTTTGGTTGAGGCTGGCAGAGTAACTGTTCCACTTGGGCCCACTCCAGACAAT
GTTCTTTATATTCAGGAATATGTTGCAAATCTTTTGAAAACAGCTTTCCCTCATCTTACT
GATAACCAAATCAAAATTACTGTGCAAGGTCTTTTTAATCTAAACCAAGACATACCTGCT
TTCAAGGATCATCTAAGAGACTTTTTAGTTCAAATTAGAGAATACACAGGTGAGGATGAC
AGTGATTTGTACTTGGAAGAGCGTCTATTTGTTTTAAGTCAAGCACAAGAAGACAAAAGA
AGAGTACAATTATCGGTACCAGGCATTCTGAACCCACATGAATTGCCAGAAGAGATGCAA
GATTAATTTGGTATAAATTTAAAACTCAGAAAATGGCAACAGCATACATAGGTTAAATAA
AATTCAGTTTAAGGTGAAATAGTGTAGTAAAATAGTGTCTTAAGCTATATTCAATGGTGA
TTGTATCTGCTGCATATTTTATAAAGTTCGATTGGGCTACCCTGGATTTTTTTTAAATAT
TTTACTGACTTACTAGGAAATAAGTACTTAAAACTTTTTTCTAAACTTTCTCAAAATTGT
TAACATTGAATTTAACTGCCATTTATAGCCTCATTTGTTTTACTGCTTTATAATAATAAG
AGTCAGTTTATATATCTGACTACAAATCTATGCATTTTTCTATGATAATTTTGTTTCCTT
AAGGAATATCATGTAAGGTGAGAGAGATGGATCATGAATATACAATATTCTGGCGGTTTT
CGGTATTAATATATCTGACTGTATTAACATTAGTTTTAGTAGTTGTAGTATGACCTGTTG
CCATTGACATGACTATTGTCTGTGTCTTGTGCTCCTAAAATATCTGTTATGATAGTTTGT
ACAGGAGGTTGTCAGGTTCCAATGCAAGGAGATGAATGCAAGTGAATTAGCTGCAACAAG
ATTAAGGTATCATATTTTAAAAGCGTAAGACATTTTCTGAGCCTTAAATATTTATAGATT
GTAAACTGCATCAATTTACATTGTTAGAAATTATAGAATATCTGTTTGTTTTTAAGTAAT
CTTCAAAAATAAGTATGTAATGCAATCTCTGTGATTTAACCCAGTGTCAGATTTCAACAT
GTACACTGCAGAATCTGAGTATTACGTGTAGATTCTAGGAAAAGTAAGAATCTATGTTAG
TAATGTTTTTGTTTCGTTTAATGTTGGCAAAACTAATTTCGTAATTTTGGAAATCTATAA
TAATATAGTGGTGACACAAAACCGTAATTATGTATGATTTCTTTATGAAATTTGGGTCCG
ATTAATTGTCGTCTTTCAATTTTGTGTTTGAAATAAACATTAAATATAAAAAAAAAA
(4377 bp)

- SilkBase 1999-2023 -