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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14277c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_04296_[Danaus_plexippus]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:12.67 TPM:12.41
ORF EntryO_TrvaFAMAMG17342_complete:A_TrvaFAMAMG_TR14277c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTATGTTTTAAAAGATTTATTATAAAGTAAGTTAAGAAAAAAATGTTTATAGAA
GTCCTTGACGCTTTAAATCTTCGAAAGTTTTTCTGTTCACGACATTGCCCTGAGAATCTT
CAAATTCTTCATCATTTTCTGCCACAAAACGTTCTGTCTCTTTTTGCTGCTTAATTTTCT
CCCACAAAGCGAGAGCGTCTTCAATTTGTGTGACGTTAGCAAAATGAGCAGTATTCGGTA
TTCCGAGACATCGCATTCCGTGAGCGTGCCTCCATTCTGCGAAATGTCTCTGAAATGCTT
TGGGGCCCTTATAGGTGTAGTTACCGCAAATCTCACAGTTGTAGCTGATGTTGAGTCCGT
GTAATTTGTATAACCAATATGGTATGGGCTTTCCATCCCATCCGAGTGGCAAATTCTTAG
GGTTGTAAGGTACTTCATCATCATCTGAGTCAAGGTCAGGCGCTGCAGAGGCGTCACTTT
CGTCTCCGCTTTCATCGCGTCGTTCACCAGCAGCCCTGGCCGCTCTACGAGTTACATTCT
CTATGGTCGCCCCTCGAGTACTGCTTATGATAGTTGCAAATCTGTAAACTTGTGCTTCAA
TTGCAGCAATATCTTTGTGTCTTTGTTGTGTTGAAGCTTTCGCCTTATTTCCCTTTTTGG
CTACAAGAGACTTGTCAAGGGCTGTCTGACCTTTAGTGCTGAATAATCTTTGAGCTCTTT
CTTCCAAAGTTCCTCCACATTTTAAACCGAGAGCCATCAGAGCTGACTTCAATCTGTCCA
GTCCAAGGGAAGCCAACTCCTCCCATGATGAGAAAGCAGACAGATCTAAATGGGCACCCA
CATTTGTCAGAGCTCCTCCAGTTTCTTTCGGCCAACCAGGAAATGTGCCAGACTCCCATT
GTTTCAAAAACTCTTGATGTGCTAAAGCCATTTCTTGAACTTGATCCATAAGAGGTTTGA
CCCTGCTCACAAAATCCTTCATGTATGTAAGCAATGCACGGATGTAATTCCTGTATTCGC
TATTCTTCCTTTCACGAGGTATGTCAAATAGATGATCAAAAATGCTCAGATATGTTATGT
AGTCAATTTTCTCAATGCCCTTCAAGTTAATATATTTTTCATAACAGGAATGCAGGTCCA
GATATTTTCCATAGCCTTCTTCATCAGTGAACTCAACAGGTACTGTATAGTCTTCAGCAG
GATTTTCCCTTTGATTTGCCAACTCTTCAAATTCAACAGACATTGGCACAGATATCTCAT
TAGGGTGTTTTCTATGAAATTCTTTAATTTGCTTAAGTCTTGCATAGAACTCCTGGAATT
CATGAGGACCTGATAAAGCAGATATTTCTTCCTTTCTCAAGCCATCTTTGTCTTCATACA
ATTCTTTAAGTCTTATAGATGCTTCAATGTATCTATCATGTAAATTCTTTAAGCGATGAT
CACCATTTATTGTTTCCCGGTGCCCTGTCTTTTTGTGAAGTATTTCTTTCACCATTGCGT
CCATAGTTCTTTCCCTCTCTTCATGGTAACTTCTCTGCTGTTCTAAAATCGTTTCCATTT
TAGATAGAGGTATATAACCTCTAAAACTTCACTTGTTACAAATGAATTTATCAGTTGTAG
GTAATTAACCAACTTGTACACATTACATTCGTAAACTAAACTAAATCAGGTTCATTTATA
ATTCACTGGAACCAAATTCTTCTTATAATGCTTATAATTACTTCTTACGATACGACAAAC
AAAAAGAGTCGTTCGAG
(1757 bp)

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