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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14246c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(IX)_chain-like_[Papilio_xuthus]
Ontology
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005737 C cytoplasm
GO:0005788 C endoplasmic reticulum lumen
Transcript
Level		FPKM:31.01 TPM:30.39
ORF EntryO_TrvaFAMAMG17321_complete:A_TrvaFAMAMG_TR14246c1_g1_i1
Sequence
(Nucleotide)
GTTCGATCAGTCCGCGTCGTGTCCGCATACTGTTCAACACATTACAGAAATAATGTTCAT
TAAATAAATTAAAATGTATTTTTGGTCGTTTATCTTCGTCATATCACTGACAACATTCAG
CAATGGACAGACGGACAATTTCACCACAGTCGCGCCCATCGCAAGGTCCATATGTTCTCC
AACATTGAAAGGCTCGGACTTCCACACGTTAGATCTGATAGCTGTGTACCGGCTTGACAA
GGCGGATACAACTGGTGTGACTCTGGTGCAAGGGTCGCAGAACATGCAATCGGCGTATAG
GATTGGAGGTGGAGCTAACCTTACTTTATCCTTGAAAGATGTGTTTCCCGAGGGTCTTCC
AAACCGTTTCACCCTGGAAGGTACTTTCAATGCTCATGGACAGCGTAGACCCTGGAGCTT
ACTTCGAGCGCGGTCCAACAATGTACTGTTCTCTTTAATACTGATGCCGGAACCGAAGAA
GGTTGCTATTCTTGTGCAAGGTTCCAGAGCGGTGTTCAAGAGTTATGAACTATTCACACC
AGGCTGGCATAAGTTGCACGTGGCTGTCGTGAATCGTACCGTTCACATTGCTGTCGATTG
CGTGGAGTTACAACCAGTGAAAATCGCTGCATACGATTTCAGCAACGCCACATCTTTGAC
GATAGTGTCGAACGATGATGGTACACCAGCACCGATTGACCTACAATGGCTGTCATTAAG
TTGCGATCGCTATGTTTTAAAGGAAGATAGCTGTGAAGAACTTGAGAAACCGATTAATCT
GATTGCGACGTCTGCTCCACACTTTGCCATCGATCCGGGTTCACTAGAAGTACCATCATT
GAACGCAAGCTGCAATGTGACTTGTCCACAAGGTCCAATGGGCCTCATGGGACCTATGGG
AGCGCAAGGAATAATAGGTCCTCCAGGGCTACCGGGTTTTAGAGGTGAAAAAGGTGATAC
TGGGTCAATGGGTCCAGTTGGACCTAAGGGTACTAAAGGAGAACCTGGAATTCCTGGACG
AACTATAAATGTAACCAGTACAGGTGTGAAGGGTGAACCGGGAGTTCCAGGAACTCGTGG
ACATAAAGGCGAAAAAGGTGACCCAGGAATTAAAGGTGATACAGGAGAACCTGGTCCAGT
TGGATTTTCCGGAATACCCGGCGTCGACGGGAAAGATGGTATCCCAGGATTACCAGGTCC
TATTGGACCGCCAGGAACACCAGGACAACAGGGCCTTCCCGGACCACCTGCTAATATAAA
CGCTTCTTTGATCGAAGGTGCTAAAGGAGAAAGGGGAGCACCTGGTCGTCCAGGCAGAGA
CGGTACTCCTGGACCAGTTGGACCTCCTGGAAAAGAAGGCATCAGGGGTTTACCAGGATC
GGAAGGCCAGAGTGGAACGCCCGGTGCTCCAGGGATGAGAGGTCCGGTCGGACCTCAAGG
GCCTCCTGGAGAAAGAGGATCAGATGGGCTACAAGGTCCTGAAGGTCCAGCCGGTAAACC
TGGAGCTCCCGGTACCCCAGGATTGCCTGCTCCAGTGGTCAGTGGCACCAGTGTACCGGG
ACCACCTGGACCCCATGGCGAACCAGGAGAGAAAGGCGAACCTGGATCACCTGGTCTTCC
AGGACGGGATGGAATCGACGGTATTCCAGGAATTCCTGGGCATGCGGGGCCTCCTGGAGT
TCCAGGAACCAACACTGTTTCAGTTCAGACACCATCAATATCTGAAAATGACGTGAGAAA
TATCTGCGAAAGTATTGTCAGAGAACGACTGAACGAGTTATCGGCTAGTCTGACGGTGCC
GACACAGACGGTGGTCACTAGAAGAGGACCTCCAGGGAAACCGGGACCTCCTGGTGCTCC
AGGAATTCAAGGAGATCCAGGAGAACCTGGGCCACGTGGATATCAGGGAGAACCTGGGGA
TCCTGGGAAACAAGGGCCAATGGGAAGTAGTGGCGCTAAAGGGGATAAAGGAGACAGGGG
CGTTGAGGGGATAGGCCTGCCTGGAACTGAAGGCCCTAGAGGCGCTCCTGGTCCAATCGG
ACCCCCAGGATATGAAGGCCGAAGGGGAGAAAGGGGTGATCCTGGACGAGAGGGTCCCAT
TGGACCCCGTGGACCTCCAGGGCAAAGAGGTGCTTGCGACTGTCCAGTAGCCTACTACAG
CTATCCTCACGGATTGAACAAAGGCCCATAATTTGTATTCTGAGCAAAATTCTTAAACCT
CCAAACTGCCTCTAAAACTCTGAAATATTCTGGAAACTTCTGTACTTAATAAAATACTGT
TGGAAAAAAAAAAAAAAAAAAAAAAAA
(2307 bp)

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