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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14155c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:23.11 TPM:22.64
ORF EntryO_TrvaFAMAMG17273_complete:A_TrvaFAMAMG_TR14155c1_g2_i1
Sequence
(Nucleotide)
AAAGAATGTCCACAGATTTACAGCTGTTTAGTGATTTGTTCGATTTCAAGTGTCTACCTT
CATAAAATTAGTGGTTTTACAACATTCGATTGAGAAAATTCTAGTGTTATTATAATTTAC
TAACATTGAAAAACACAAAAGTGAAGTGAACTCAACAATCAGTTTCAGAACTAAACAATC
TACAGCAAAATTCGATTACTCGACAGTGCATAATTGACATTCGTGCGTTGTAAGTGTAGT
GTGACGAATAGTGCGGGACGAGTAGGTAGTGTGTGATGTTGTATTGATAAAGTGCAGTGG
GTGAGTGAATGCAGAGGCAGCGTTGCAGCGCTCGCCCTGGCATGCTGCCGGGCAGGTAGC
GCGCGCGGGCGGCCTGCGCAGGCCCCACACCAGCAGTTGCGAGTCTTCCCCAACGTCGTC
TATGGCCGAGCAACACACCACACCGTCGTCGCACTCTGCACTCACGAGAGAGTCCAGCCG
GTCTTCTCCTAGCAGGGTGGTGGGCGGTCGGTGGTTGCGACGAGTTCGTCGAGCAAGCCA
CGGCCGTCGGAACAGACGCTACGTGACATCGCCTTTGCCGCGCTCCACAAGCCGACATTC
CTCTAACCGCGGCTCCGACGTAGATTCCCACGTCGAACTACGTAGAAGCTCACGGCTCAT
CAATTCACTACCTCGATCTGATTATTCCGTTACCGAGCGCTGGTCATACGGCACTGACGT
TTACGAAACAAGGTGTGATACCTCGCATCATAAGAGCGGAGATTCCAAAACTTCGAGTAC
ACACGCAAAACGTAGACGCACTTCTTCGCATGACCGAAAAAAACAAAAAGTCAAATCGAA
CAATAGTACAGAAGAGTGCATTGCACATTGTACACGCTCACGGACTGCTCTTAAAACAAC
AGAGAGTGTTTGTGAGCAAACTCCGAACTCTTTACCACCAGTATCGACTAACCAAAGTAC
CGCAGTAGCTCAAGCGCAACCAAATACCTCTGAAGGTGGCTTACTACCTTTAGACGAAAG
AGACTTTGCTTATTCACCGTTTAGTTCATCAACCGTCACAGATCTTATTGATTCGGATTA
TTCAGTGTACAGTCCTACAACAAGTCGCAGAAAAGGCAAAAAGCGAAAACGATCTCATCA
TCGTTCTTTGTCAAGCAGAAAGAACAGTTATTTGGCAGGGATTGAAGATTACAAGAAAAG
GGTAAAAATAGAGCCTACCGAAATCAGCGAACCTCATAAAACACCGAAGAACGAATCAGA
AAAAGTAGAGAGCACTACACCACAGACTCCTTGTACATATTTATTACGGAATAGACATCA
TCGTGACCTCGGAGCACCCACCTCGACAGTCATTAGTGAGAACGCAGCGAGCCTGGCAAC
CAGCGACGCTGCTCACAAGAAAACTAACACCGAACATAAGAATACCACAGAGGGTAGAAC
CATATCACCTCCGCCATACAGAGATCTACAAGAAGCGAGTTCATCAAAGGCACAGAACAG
TGGAAGCAAACTGCTGATTGTTCCACGTGACCTGCCGTATCTACGTCAAACTAACGCTCG
GAGGAGTATTGCAGCTGCGACGGGGGCTACTTTGGGAGCTTGCCTGACGCGGGGAGCCTC
GAGCACTCAGCGACAGAGGCAGGATACGACCTCAAAGAGACAGGTAGCGAGCGAGGGCGC
GGCGAGCAGCAGCGCGGCGGCGGGCAGGCGAGCGCGGGCTCGCGACATGCCGCAGCCGCA
ACCACCCTCTACTCGGAAAGAAAAACGAGGCAAAACCAGTCTGGGTTCGTGTGCCAGTAC
TGGAGGTGCAACCAGCCGCTCCCACGCCCAGCCTTTAACCACGGGTGCTGTAGCATCAAC
GTCGACCACACCGCCAGCGCAAGCCGCAGCAGTCTCGATGCCTGATAATGCTGCAAGTGA
CGTCAAGCCTAAAGGCATGACGTCAGGCGAGGAGTGCGGTGTGGGGGGCGCGGGCGGCGC
GGTGGGAGGCGGCGCGGGGGTCGCGGGAGTGGCGGCAGCGCTAGGAGAGGAGTCCTCGTC
CGAGGAGGGCGAGGTGGGCCGGCTGCAGGCGCTACTGGAGGCGCGCGGGTTGCCGCCGCA
TCTACTGGGCGCGCTCGGACCGCGCATGCAACATCTCTTGCACAGAACTGTCACTGCTAA
CTCAGCTGCATCTAAAGCAGCTCAGTTGCTCGCCGGTCTGCAAGCGACAGGCGACGAAGG
TCAACAACTGCAAGCCGTGATCGAAATGTGCCAGCTGCTGGTGATGGGTAACGAGGACAC
GCTCGCCGGATTCCCTGTCCGACAAGTCGTACCCGCACTCGTCAATCTGCTCGCCGCTGA
ACATAACTTTGATATGATGAACCACGCGTGCCGCGCTCTGACGTACATGCTGGAGGCGCT
CCCCCGCAGCAGCGGCGCCGTGGCGCTGGCCGTGCCCGCCTTCCTCGACAAGCTGCAGGC
CATCACGTGCATGGACGTCGCCGAGCAGAGCCTCACCGCGCTCGACATGCTCTCACGACG
ACACGCCAAGGCGATCCTGCAAGCTCGCGGCGTATCAGCTTGTTTGACATATCTGGATTT
CTTCTCAATAAATGCTCAACGAGCAGCACTCTCCATAACTGCCAACTGTTGTCAAAATCT
CACTGCAGATGAGTTCCATCTCGTCAGAGAATCTCTACAATTACTTGCTAATAGACTGAC
CCAACAAGATAAGAAATCGGTGGAATGCGTTTGCCTCGCATTCTCTCGTCTCGTGGATAG
CTTCCAGCACGATCCGGCGCGGCTACAGGAAATTGCTACCCCAGAGCTGCTCACCAATCT
TCAACAACTTTTGGTGGTGCAGCCGCCGCTGATATCGGGCGCGACGTTCATCACGGTGCT
GCGTCTGCTGTGGGTGATGTGCGCGGCGTGTCCGCAGCTCGCGCTCGCGCTGCACCAGCG
CTCCATCGCCGACACGCTGCTCTGTCTGCTCACCGGCTCCACGCTACATCAGGAGCAAGT
GGAGTTAATACCTCGCTTACCACAAGAGCTGTACGAGATCACGTGTCTCATCGGCGAGCT
GATGCCGCGGCTACCTACAGACGGGATCTTCACGGTGGACGCGCATCTCGACCGACCCTG
GTCCACCGCTACTGAACGCACCGCGCACTGGCAGTGGAGGGATGATAGAGGTGTTTGGCG
TTCGTATTCATGGGCAGAAAGCCGTGCTCTGGAAGCAGGTATGGCGGCGGGCGAGGAGGA
GGTGTGCCTGAGCACGCTGGGCCGCTCCTACACCGTCGACCTCACCGCCATGCAGCAGCT
CAACGAGCACACCGGCACCGCGCGCCCCGTGCAGCGCCTCGCGCCGCCGCTCTCGCCGCA
AGCCGCCGCCGCCGCCGCAGCGCCAGATCCGCGTATAAGCATGGTGCGTTCGAATCCATC
GTTGATTCGTGCATTGCTGGCCGTGCTCCACGAGGTGTACTGGAGCTCGGCGGGCCCGGC
CGTGCGCTCGCAGGCGCTTAAAGCTATACTTCGCTGTGTCTACTACGCCGACGCAACGCT
ACTGCGACAAGTACTCAAGATGCAGGTGATATCATCTCACATAGCGGGCATGATGGCGTC
GAGCGACCTTCGCATAGTGGTGGGGTCGCTGCAGCTGGCCGAGATCCTGATGCAGCGGCT
GCCGGACGAGATGGCGGCTCAGTTCCGGCGCGAGGGCGTGCTGCACCAGGTCGCGCAGCT
CGCCGCACCGCACACCGCCACGCACGCCACCACCAACACGCAACAGAAGTCACCGAGCGG
TCCCAGTACTCGTTCAAGCGGTGCCGCATCCCCTCCCACGTCGTCATCCGCTTCGTTAGA
ACACAACAACCTCACCATGGCCTTCTCTGCGTCTGGTTCGTTTGTCGCCACTTCACTGCC
AACAAGCAGTAGTGACGTGAGCGGATCGGAGCCCGGGCCGGCGTCTGCTTCCACTCATCC
GCAGCTACTGACCGCAGTGCACAGATCGGGCAGTCCCCTGCAGCTGGCGGAGATGTTGAA
GCGCAAGCGTGCCATCAAGCGGAGCGGCGCCACGGGCGGGCGACACGGCCGGCGCCGGGA
CGATGCCGCGCCCGCCTCGAATCATGCACCATCGCCGCACGGAGCGAGTAGTTCAGGCGG
CGGTCGTGGTTCGAGCGGTCGTCCCAGCGGCGCGTCCAAGACTGCTTCGTTCCTCTCGTC
GCTGAACCCGTCCCGCTGGGGCCGCGCGCCGCACCAACACAAAGATACTGCGCTCCTTGC
ATCGCCGCATGCTACTGCCAACCTCACTGTGCAGAACAAAGAGAAAGTCCGCGAGTGGAT
ATCGTGGTCGGCTCGTCGCCTGCGTTGCGAGTGGGGCGCTCTGGGCGGCGGCGCAGGTGC
GTTGGAACAGCTCGGTGCGCTCGCAGCCGCCCTGCCGCACGCCGCGCACGCACGCGCCGC
ACTCGCGCACCTCCGCGACACGCTACTCAACCACGATGTCTCGCCCTTCGAGGTGAATCA
TTCAGGAGTGCTCAGCGCCCTGCATCAGTATTTGACCGGGTATGACCTGGAAGCGGAGGG
CTCGGAGAAGCGCGAAGGTGAAGCCCCGGCTCCGGAGTCGGCGGATCTCGTGCAGGCGTG
TGAAGAGAGACTGAGAGTGTTCTTACACGTTTTTGCTGAAATGCCCATTGAGCCTGAGGT
GAACGATTGGAAAGAGTCGATAGGTAACAGCAGCGCGCTGTGTGCGTTGGTCGCGAAGGT
GAACGCGTGCGTGTCTCACCTGGAACAGTTCCCGGTGCGAGTACACGACCTGCCCGCGCG
GCCCGCCACCTCCGCACTCAAGTTCTTCAACACTCATCAACTCATGTGTGATCTCAAACG
TCATCCTTCATGCAACACTTTGAAGCAATGGAAGGGTGGTGTAGTACGAATAGACCCATT
AGCTTTAGTTCAAGCCATAGAGAGATACCTGGCGCAGCGCGGCTACGCCCAGGGTCGCAC
GCGGTCGGACTCGGCGGGCGCGCACTCGGACGACGAGCCCGCCTCCGACGACGACGTCGA
GGACGCACTGCCCGCCCCGCCGCAACCCACCAACGATTCTGAACACAAACTCGAGTTCCT
AATAGGCGATACCGTTCTGCCATACAACATGACCGTGTATCAAGCGGTGCGACAATTTGG
CGAACAAAATGACGCCGACACTGATACTGAAACTCCATTGGCCAATGCAGGGATATGGGT
CCAAACACACACAATATACTATCGAGCAGTAGAACCGAATGATCAACCGCGTTCTGAAAG
CACACCATCAAAGAAAGGCAAAGGACAACCTACAAAGATCTCATCTAGACGGAAACCTGA
TTTACTTTGGAATGAGGGCATGGTGCCGCGTCGTTCGTCTCCGCTAGTGGAGCAGGTGCG
GCGGCGGCTGGTGGCGGAGGGCGAGGTGCGCGACGCGTCGCTGCCCGCGCTAGCCGTGCT
GCGCGCCCTACACGCGCTCTCCCGACACTGGCACGCGCTCTACACCGCCGCCTGCCTGCC
CGACCACGCGCCGCTCGTGCCACATGCAGACTTTATCAACTCTAAGCTCGCTGCCAAAGC
CAATCGACAATTACAGGACCCATTAGTAATAATGACAGGAAATCTTCCACCTTGGTTAAA
GAAAATTGCTTATGCGTGTCCGTTCGTGTTGCCGTTCGAGTGTCGTCACCTATTGTTCTA
CGTGGTGTCGTTTGACCGCGACCGCGCGCTGCAACGCCTGCTGGAGGCGGGTGGCGAGCG
CGGCGGCGTGGCGGGCGGCGCTCCCGGCGCGGACACGGAGCGCGTGGCGCCGCGTCTGGA
CCGCCGCAAGCGCACCGTGCAGCGACACAACGTGCTGCGACAGGCCGAGCACGTCATGCA
CGAGTTCGCGCACACTAAAGCGCTTCTCGAAATACAGTACGAGAACGAGGTCGGCACCGG
CCTCGGGCCCACGCTCGAGTTCTATGCGCTGGTCTCGCAGCAGCTGCAGCGCGCCGACCT
CGACCTCTGGCACGGCAGCGAAAACTTCAAACAGAAGCCCGGCTCATTCGGAGGGGAAAT
AGTCAAATCTGGCGAAGCGGCCGCTCGTCTTGCAACTTCAGTTCGCGACGGTTTGAATCT
TGACGAGGAACGCACGCGAGCCTCTTCGCCGACAGATCGTGATAAAGATGCACCCGAACC
GGCCGCGTTCGTCTCGTGGCCGTGTGGACTGTTCCCACAGGCGTTGGGTCGTAACGCACG
CGCTTCGCATCTCTCAAGAGTTAAAGCCAAGTTCCGGTTCCTTGGGAAATTTATGGCTAA
AGCAGTAATGGATTCTCGAATGGTGGATATTCCGTTGTCTGTAACAATGTATCGGTGGGT
GATAAATGAAGAGCGCTGGCTCAGTCTGAGCGACGTGCGACACGTGGCGCCTGAACTGTG
GCGCTCGTTGTGTCGTCTGCGACGCGTCGCCGACCGCGCACAACATATCTCCACCGACAC
ACGACACACACAGGAACAGAAGAACCAACTGATAACTAACCTCGAGTTGGATGGGTGTCC
AATTGAAGAACTAGGCTTAGATTTTATTCTACCGGGAGATGGATGCACAGAATTACGTCG
GGGTGGCAGAGATATGCCTGTTACGGCGCACAATCTACAAAATTATATTGATCTCGTAAC
TCATTGGTTGTTATATGAAGGTGTTACAAAGCAAATGGAAGCCTTTAAAGAAGGATTTGA
GTCAGTATTTCCACTAACCAATCTAAAAATATTTTATCCAGAAGAGTTGGAACAAGTATT
TTGTGGAAGTCCCTTAGGAGGTCGTGATCAACGCTGGGATCCCCGCATGCTCGCCGAGTG
CATTCGACCGGATCACGGATACAATGCAGAATCTCGCGCCATACGCATGCTCATTGATAT
TCTGGCTTCATATAACCGTGAGGAACAACGACTCTTCTTACAATTTGTAACTGGAAGTCC
TCGTTTGCCAACTGGAGGTTTCAAAGCTCTAAATCCGCCTCTGACAGTGGTGCGTAAATC
GTTGGAGTCTTGCCTGGACCCGGACGAGTACCTGCCGTCGGTGATGACGTGCGTGAACTA
CCTGAAGCTGCCGGACTACAGCAGCGCGGAGGTGATGCGCGCCAAGCTGCGTCTGGCCGC
CTCCGAGGGACAACACTCGTTCCATCTCTCCTAAACGACTCCGTTTCCTCTTTACTGTGA
TTATTATAGCGGCCCCTTTGTATACACGTGTGAATGCGGTTAGTGATATCTTATTGTAAT
GTGTTAGTCAACAGTGTGTAAGCTCTGGACAAATGTTTATGTGCAATCAGAACCTATATT
TTATAATGTGTGGACACTACAAGTGCGGCATTCGTAGTTTTGTTCATATTTTCGATTTTT
TAGATTATCATAAATATGTTTTTATCATATTTTGCGTTAATTTAATGTGATAGCTTTGTA
TATTACTTTTAATACACCAGAGTGACGCTCTTTATATTAGATTTGAGTGGATAATGAAAC
TGTGTCAAATAGTGTAGGTGGCAATTTGTCTATTTGATGAAAATTTACATTTCATATTAC
TATTATAGAAATATTTCTCTTAAGGTGTTTTAAAAAAGATTGTACTGGAATTGTAAAATA
TTCAGTAATTATATAAATACTGTAAATTGATACGGCACAATATGATGGCCACTATGTTGT
CCTCCCTAGAGTGTCCTCTGAATTATATAGCATTTATTACCAAATGGTGTATGTTTTTGA
TTCAATAAGTATCATAATTGAGTAAAAAAAGTGCAAAGTTTATGTGTAACAATTCCAATA
AACCATATAATAAAAAAAAAAAA
(7823 bp)

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