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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR14155c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:5.44 TPM:5.33
ORF EntryO_TrvaFAMAMG17266_complete:A_TrvaFAMAMG_TR14155c1_g1_i1
Sequence
(Nucleotide)
AAAGAATGTCCACAGATTTACAGCTGTTTAGTGATTTGTTCGATTTCAAGTGTCTACCTT
CATAAAATTAGTGGTTTTACAACATTCGATTGAGAAAATTCTAGTGTTATTATAATTTAC
TAACATTGAAAAACACAAAAGTGAAGTGAACTCAACAATCAGTTTCAGAACTAAACAATC
TACAGCAAAATTCGATTACTCGACAGTGCATAATTGACATTCGTGCGTTGTAAGTGTAGT
GTGACGAATAGTGCGGGACGAGTAGGTAGTGTGTGATGTTGTATTGATAAAGTGCAGTGG
GTGAGTGAATGCAGAGGCAGCGTTGCAGCGCTCGCCCTGGCATGCTGCCGGGCAGGTAGC
GCGCGCGGGCGGCCTGCGCAGGCCCCACACCAGCAGTTGCGAGTCTTCCCCAACGTCGTC
TATGGCCGAGCAACACACCACACCGTCGTCGCACTCTGCACTCACGAGAGAGTCCAGCCG
GTCTTCTCCTAGCAGGGTGGTGGGCGGTCGGTGGTTGCGACGAGTTCGTCGAGCAAGCCA
CGGCCGTCGGAACAGACGCTACGTGACATCGCCTTTGCCGCGCTCCACAAGCCGACATTC
CTCTAACCGCGGCTCCGACGTAGATTCCCACGTCGAACTACGTAGAAGCTCACGGCTCAT
CAATTCACTACCTCGATCTGATTATTCCGTTACCGAGCGCTGGTCATACGGCACTGACGT
TTACGAAACAAGGTGTGATACCTCGCATCATAAGAGCGGAGATTCCAAAACTTCGAGTAC
ACACGCAAAACGTAGACGCACTTCTTCGCATGACCGAAAAAAAACAAAAAGTCAAATCGA
ACAATAGTACAGAAGAGTGCATTGCACATTGTACACGCTCACGGACTGCTCTTAAAACAA
CAGAGAGTGTTTGTGAGCAAACTCCGAACTCTTTACCACCAGTATCGACTAACCAAAGTA
CCGCAGTAGCTCAAGCGCAACCAAATACCTCTGAAGGTGGCTTACTACCTTTAGACGAAA
GAGACTTTGCTTATTCACCGTTTAGTTCATCAACCGTCACAGATCTTATTGATTCGGATT
ATTCAGTGTACAGTCCTACAACAAGTCGCAGAAAAGGCAAAAAGCGAAAACGATCTCATC
ATCGTTCTTTGTCAAGCAGAAAGAACAGTTATTTGGCAGGGATTGAAGATTACAAGAAAA
GGGTAAAAATAGAGCCTACCGAAATCAGCGAACCTCATAAAACACCGAAGAACGAATCAG
AAAAAGTAGAGAGCACTACACCACAGACTCCTTGTACATATTTATTACGGAATAGACATC
ATCGTGACCTCGGAGCACCCACCTCGACAGTCATTAGTGAGAACGCAGCGAGCCTGGCAA
CCAGCGACGCTGCTCACAAGAAAACTAACACCGAACATAAGAATACCACAGAGGGTAGAA
CCATATCACCTCCGCCATACAGAGATCTACAAGAAGCGAGTTCATCAAAGGCACAGAACA
GTGGAAGCAAACTGCTGATTGTTCCACGTGACCTGCCGTATCTACGTCAAACTAACGCTC
GGAGGAGTATTGCAGCTGCGACGGGGGCTACTTTGGGAGCTTGCCTGACGCGGGGAGCCT
CGAGCACTCAGCGACAGAGGCAGGATACGACCTCAAAGAGACAGGTAGCGAGCGAGGGCG
CGGCGAGCAGCAGCGCGGCGGCGGGCAGGCGAGCGCGGGCTCGCGACATGCCGCAGCCGC
AACCACCCTCTACTCGGAAAGAAAAACGAGGCAAAACCAGTCTGGGTTCGTGTGCCAGTA
CTGGAGGTGCAACCAGCCGCTCCCACGCCCAGCCTTTAACCACGGGTGCTGTAGCATCAA
CGTCGACCACACCGCCAGCGCAAGCCGCAGCAGTCTCGATGCCTGATAATGCTGCAAGTG
ACGTCAAGCCTAAAGGCATGACGTCAGGCGAGGAGTGCGGTGTGGGGGGCGCGGGCGGCG
CGGTGGGAGGCGGCGCGGGGGTCGCGGGAGTGGCGGCAGCGCTAGGAGAGGAGTCCTCGT
CCGAGGAGGGCGAGGTGGGCCGGCTGCAGGCGCTACTGGAGGCGCGCGGGTTGCCGCCGC
ATCTACTGGGCGCGCTCGGACCGCGCATGCAACATCTCTTGCACAGAACTGTCACTGCTA
ACTCAGCTGCATCTAAAGCAGCTCAGTTGCTCGCCGGTCTGCAAGCGACAGGCGACGAAG
GTCAACAACTGCAAGCCGTGATCGAAATGTGCCAGCTGCTGGTGATGGGTAACGAGGACA
CGCTCGCCGGATTCCCTGTCCGACAAGTCGTACCCGCACTCGTCAATCTGCTCGCCGCTG
AACATAACTTTGATATGATGAACCACGCGTGCCGCGCTCTGACGTACATGCTGGAGGCGC
TCCCCCGCAGCAGCGGCGCCGTGGCGCTGGCCGTGCCCGCCTTCCTCGACAAGCTGCAGG
CCATCACGTGCATGGACGTCGCCGAGCAGAGCCTCACCGCGCTCGACATGCTCTCACGAC
GACACGCCAAGGCGATCCTGCAAGCTCGCGGCGTATCAGCTTGTTTGACATATCTGGATT
TCTTCTCAATAAATGCTCAACGAGCAGCACTCTCCATAACTGCCAACTGTTGTCAAAATC
TCACTGCAGATGAGTTCCATCTCGTCAGAGAATCTCTACAATTACTTGCTAATAGACTGA
CCCAACAAGATAAGAAATCGGTGGAATGCGTTTGCCTCGCATTCTCTCGTCTCGTGGATA
GCTTCCAGCACGATCCGGCGCGGCTACAGGAAATTGCTACCCCAGAGCTGCTCACCAATC
TTCAACAACTTTTGGTGGTGCAGCCGCCGCTGATATCGGGCGCGACGTTCATCACGGTGC
TGCGTCTGCTGTGGGTGATGTGCGCGGCGTGTCCGCAGCTCGCGCTCGCGCTGCACCAGC
GCTCCATCGCCGACACGCTGCTCTGTCTGCTCACCGGCTCCACGCTACATCAGGAGCAAG
TGGAGTTAATACCTCGCTTACCACAAGAGCTGTACGAGATCACGTGTCTCATCGGCGAGC
TGATGCCGCGGCTACCTACAGACGGGATCTTCACGGTGGACGCGCATCTCGACCGACCCT
GGTCCACCGCTACTGAACGCACCGCGCACTGGCAGTGGAGGGATGATAGAGGTGTTTGGC
GTTCGTATTCATGGGCAGAAAGCCGTGCTCTGGAAGCAGGTATGGCGGCGGGCGAGGAGG
AGGTGTGCCTGAGCACGCTGGGCCGCTCCTACACCGTCGACCTCACCGCCATGCAGCAGC
TCAACGAGCACACCGGCACCGCGCGCCCCGTGCAGCGCCTCGCGCCGCCGCTCTCGCCGC
AAGCCGCCGCCGCCGCCGCAGCGCCAGATCCGCGTATAAGCATGGTGCGTTCGAATCCAT
CGTTGATTCGTGCATTGCTGGCCGTGCTCCACGAGGTGTACTGGAGCTCGGCGGGCCCGG
CCGTGCGCTCGCAGGCGCTTAAAGCTATACTTCGCTGTGTCTACTACGCCGACGCAACGC
TACTGCGACAAGTACTCAAGATGCAGGTGATATCATCTCACATAGCGGGCATGATGGCGT
CGAGCGACCTTCGCATAGTGGTGGGGTCGCTGCAGCTGGCCGAGATCCTGATGCAGCGGC
TGCCGGACGAGATGGCGGCTCAGTTCCGGCGCGAGGGCGTGCTGCACCAGGTCGCGCAGC
TCGCCGCACCGCACACCGCCACGCACGCCACCACCAACACGCAACAGAAGTCACCGAGCG
GTCCCAGTACTCGTTCAAGCGGTGCCGCATCCCCTCCCACGTCGTCATCCGCTTCGTTAG
AACACAACAACCTCACCATGGCCTTCTCTGCGTCTGGTTCGTTTGTCGCCACTTCACTGC
CAACAAGCAGTAGTGACGTGAGCGGATCGGAGCCCGGGCCGGCGTCTGCTTCCACTCATC
CGCAGCTACTGACCGCAGTGCACAGATCGGGCAGTCCCCTGCAGCTGGCGGAGATGTTGA
AGCGCAAGCGTGCCATCAAGCGGAGCGGCGCCACGGGCGGGCGACACGGCCGGCGCCGGG
ACGATGCCGCGCCCGCCTCGAATCATGCACCATCGCCGCACGGAGCGAGTAGTTCAGGCG
GCGGTCGTGGTTCGAGCGGTCGTCCCAGCGGCGCGTCCAAGACTGCTTCGTTCCTCTCGT
CGCTGAACCCGTCCCGCTGGGGCCGCGCGCCGCACCAACACAAAGATACTGCGCTCCTTG
CATCGCCGCATGCTACTGCCAACCTCACTGTGCAGAACAAAGAGAAAGTCCGCGAGTGGA
TATCGTGGTCGGCTCGTCGCCTGCGTTGCGAGTGGGGCGCTCTGGGCGGCGGCGCAGGTG
CGTTGGAACAGCTCGGTGCGCTCGCAGCCGCCCTGCCGCACGCCGCGCACGCACGCGCCG
CACTCGCGCACCTCCGCGACACGCTACTCAACCACGATGTCTCGCCCTTCGAGGTGAATC
ATTCAGGAGTGCTCAGCGCCCTGCATCAGTATTTGACCGGGTATGACCTGGAAGCGGAGG
GCTCGGAGAAGCGCGAAGGTGAAGCCCCGGCTCCGGAGTCGGCGGATCTCGTGCAGGCGT
GTGAAGAGAGACTGAGAGTGTTCTTACACGTTTTTGCTGAAATGCCCATTGAGCCTGAGG
TGAACGATTGGAAAGAGTCGATAGGTAACAGCAGCGCGCTGTGTGCGTTGGTCGCGAAGG
TGAACGCGTGCGTGTCTCACCTGGAACAGTTCCCGGTGCGAGTACACGACCTGCCCGCGC
GGCCCGCCACCTCCGCACTCAAGTTCTTCAACACTCATCAACTCATGTGTGATCTCAAAC
GTCATCCTTCATGCAACACTTTGAAGCAATGGAAGGGTGGTGTAGTACGAATAGACCCAT
TAGCTTTAGTTCAAGCCATAGAGAGATACCTGGCGCAGCGCGGCTACGCCCAGGGTCGCA
CGCGGTCGGACTCGGCGGGCGCGCACTCGGACGACGAGCCCGCCTCCGACGACGACGTCG
AGGACGCACTGCCCGCCCCGCCGCAACCCACCAACGATTCTGAACACAAACTCGAGTTCC
TAATAGGCGATACCGTTCTGCCATACAACATGACCGTGTATCAAGCGGTGCGACAATTTG
GCGAACAAAATGACGCCGACACTGATACTGAAACTCCATTGGCCAATGCAGGGATATGGG
TCCAAACACACACAATATACTATCGAGCAGTAGAACCGAATGATCAACCGCGTTCTGAAA
GCACACCATCAAAGAAAGGCAAAGGACAACCTACAAAGATCTCATCTAGACGGAAACCTG
ATTTACTTTGGAATGAGGGCATGGTGCCGCGTCGTTCGTCTCCGCTAGTGGAGCAGGTGC
GGCGGCGGCTGGTGGCGGAGGGCGAGGTGCGCGACGCGTCGCTGCCCGCGCTAGCCGTGC
TGCGCGCCCTACACGCGCTCTCCCGACACTGGCACGCGCTCTACACCGCCGCCTGCCTGC
CCGACCACGCGCCGCTCGTGCCACATGCAGACTTTATCAACTCTAAGCTCGCTGCCAAAG
CCAATCGACAATTACAGGACCCATTAGTAATAATGACAGGAAATCTTCCACCTTGGTTAA
AGAAAATTGCTTATGCGTGTCCGTTCGTGTTGCCGTTCGAGTGTCGTCACCTATTGTTCT
ACGTGGTGTCGTTTGACCGCGACCGCGCGCTGCAACGCCTGCTGGAGGCGGGTGGCGAGC
GCGGCGGCGTGGCGGGCGGCGCTCCCGGCGCGGACACGGAGCGCGTGGCGCCGCGTCTGG
ACCGCCGCAAGCGCACCGTGCAGCGACACAACGTGCTGCGACAGGCCGAGCACGTCATGC
ACGAGTTCGCGCACACTAAAGCGCTTCTCGAAATACAGTACGAGAACGAGGTCGGCACCG
GCCTCGGGCCCACGCTCGAGTTCTATGCGCTGGTCTCGCAGCAGCTGCAGCGCGCCGACC
TCGACCTCTGGCACGGCAGCGAAAACTTCAAACAGAAGCCCGGCTCATTCGGAGGGGAAA
TAGTCAAATCTGGCGAAGCGGCCGCTCGTCTTGCAACTTCAGTTCGCGACGGTTTGAATC
TTGACGAGGAACGCACGCGAGCCTCTTCGCCGACAGATCGTGATAAAGATGCACCCGAAC
CGGCCGCGTTCGTCTCGTGGCCGTGTGGACTGTTCCCACAGGCGTTGGGTCGTAACGCAC
GCGCTTCGCATCTCTCAAGAGTTAAAGCCAAGTTCCGGTTCCTTGGGAAATTTATGGCTA
AAGCAGTAATGGATTCTCGAATGGTGGATATTCCGTTGTCTGTAACAATGTATCGGTGGG
TGATAAATGAAGAGCGCTGGCTCAGTCTGAGCGACGTGCGACACGTGGCGCCTGAACTGT
GGCGCTCGTTGTGTCGTCTGCGACGCGTCGCCGACCGCGCACAACATATCTCCACCGACA
CACGACACACACAGGAACAGAAGAACCAACTGATAACTAACCTCGAGTTGGATGGGTGTC
CAATTGAAGAACTAGGCTTAGATTTTATTCTACCGGGAGATGGATGCACAGAATTACGTC
GGGGTGGCAGAGATATGCCTGTTACGGCGCACAATCTACAAAATTATATTGATCTCGTAA
CTCATTGGTTGTTATATGAAGGTGTTACAAAGCAAATGGAAGCCTTTAAAGAAGGATTTG
AGTCAGTATTTCCACTAACCAATCTAAAAATATTTTATCCAGAAGAGTTGGAACAAGTAT
TTTGTGGAAGTCCCTTAGGAGGTCGTGATCAACGCTGGGATCCCCGCATGCTCGCCGAGT
GCATTCGACCGGATCACGGATACAATGCAGAATCTCGCGCCATACGCATGCTCATTGATA
TTCTGGCTTCATATAACCGTGAGGAACAACGACTCTTCTTACAATTTGTAACTGGAAGTC
CTCGTTTGCCAACTGGAGGTTTCAAAGCTCTAAATCCGCCTCTGACAGTGGTGCGTAAAT
CGTTGGAGTCTTGCCTGGACCCGGACGAGTACCTGCCGTCGGTGATGACGTGCGTGAACT
ACCTGAAGCTGCCGGACTACAGCAGCGCGGAGGTGATGCGCGCCAAGCTGCGTCTGGCCG
CCTCCGAGGGACAACACTCGTTCCATCTCTCCTAAACGACTCCGTTTCCTCTTTACTGTG
ATTATTATAGCGGCCCCTTTGTATACACGTGTGAATGCGGTTAGTGATATCTTATTGTAA
TGTGTTAGTCAACAGTGTGTAAGCTCTGGACAAATGTTTATGTGCAATCAGAACCTATAT
TTTATAATGTGTGGACACTACAAGTGCGGCATTCGTAGTTTTGTTCATATTTTCGATTTT
TTAGATTATCATAAATATGTTTTTATCATATTTTGCGTTAATTTAATGTGATAGCTTTGT
ATATTACTTTTAATACACCAGAGTGACGCTCTTTATATTAGATTTGAGTGGATAATGAAA
CTGTGTCAAATAGTGTAGGTGGCAATTTGTCTATTTGATGAAAATTTACATTTCATATTA
CTATTATAGAAATATTTCTCTTAAGGTGTTTTAAAAAAGATTGTACTGGAATTGTAAAAT
ATTCAGTAATTATATAAATACTGTAAATTGATACGGCACAATATGATGGCCACTATGTTG
TCCTCCCTAGAGTGTCCTCTGAATTATATAGCATTTATTACCAAATGGTGTATGTTTTTG
ATTCAATAAGTATCATAATTGAGTAAAAAAAGTGCAAAGTTTATGTGTAACAATTCCAAT
AAACCATATAATAAAAAAAAAAAA
(7824 bp)

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