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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13831c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_receptor-type_tyrosine-protein_phosphatase_kappa_isoform_X2_[Bombyx_mori]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005911 C cell-cell junction
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0008013 F beta-catenin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0009986 C cell surface
GO:0010839 P negative regulation of keratinocyte proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030336 P negative regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031175 P neuron projection development
GO:0031256 C leading edge membrane
GO:0034394 P protein localization to cell surface
GO:0034614 P cellular response to reactive oxygen species
GO:0034644 P cellular response to UV
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043025 C neuronal cell body
GO:0045295 F gamma-catenin binding
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048041 P focal adhesion assembly
Transcript
Level		FPKM:0.86 TPM:0.84
ORF EntryO_TrvaFAMAMG17142_internal:A_TrvaFAMAMG_TR13831c0_g1_i1
Sequence
(Nucleotide)
AAGAGAGATTCATCCTGCAATTCCACTACACACAATGGCATTCACATACGTGTCCGTTCA
GCAATGCACTCCTAGAGTTCAGGAGGAGAGTCAGAGCAGTCGTCGGCAGAAGATTAGCGA
CAAATCCTGCGGCTGGGCCGATGGTGGTGCATTGCAATGATGGTGGAGGCAGATCAGGTG
TGTATTTAGCCATCGACGCGAACCTAGAACTGGCTGAAGAGGAAGACTGCTTCGATGTGT
TCGGCTGTTTGAAGAAACTTCGAGCATCGCGGAAAGGCTTGATTGAAAACGAGGAGCAGT
ATAAATTCGTCTACGACACGTTAGAGGAGCATGTGGTTTGCGGAGTATCATGGTTCCCTG
TCTCAGAACTATCGCAGAGACTAAAGCAAAAATCCCAAAGAGATCCGGTGACGAAACTGA
ATGAATACCAGAAGGAGTACCAGCAGATATGCAAACAGACGCCGAGGTTCACGATAGGGG
ACTGCGCCGGTGGACACAGAGGAGATAATAGAGAAAAGAACCGAGATGTATTGGTGGTGC
CACCCGACAACTTTCGTCCGTATCTGACGTCTTTTCAAGGGAACAATTTCACTGATTACA
TCAACGCTGTGTTTGTGGACGGTTACACCAAGCCTCGCGAGTACATCGTCACGGAATGGC
CTCTCATGATGACTCAGGGCGAGTTCTGGTCGTTAGTTTACGATTATGAATGTGCTGCTG
TCGTGGTTTTATGTGTTCCGCCGAAGAATTCTCAACAATACCCGCCATTTTGGCCTGAGG
GACGACATTCTAAGAAAT
(798 bp)

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