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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13712c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		Nuclear_RNA_export_factor_1_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:2.62 TPM:2.57
ORF EntryO_TrvaFAMAMG17040_5prime_partial:A_TrvaFAMAMG_TR13712c0_g2_i2
Sequence
(Nucleotide)
GTTTGCTGTCTCCTGTAAAATTTGCTAGAGTGTAGATTGGCCAAACAAGCACTGAGGTGA
CGATATGTTAAGTAAAATTGAGTATTAGTTGCTATGTGATTAATGTAATGTTTAAATAGT
GGCATATATATTTGAAATATTGATATTACTATAATTTAAATGTAGTTGGACTTTATGTTT
AAATATTTATCTTCCAAAACAAATTTCTATTTATTTTACACTTTTTGTCACTATTTAAGC
ATGTTTATGAAACAGCTACCATGTTCATGTTATTAAAATAAGTAGTTCTAATGTCAAGCA
AGAAGATTTAACTAGATTTAGTTGTTGGTATTAGATAAACCTACACATTCATGATGTCTA
TGATTTAACTTCGAATGAAAAAACTGCTCCCAAACTGAATGAAAGGAATCACTCAAGACA
TTCTTTGATAATAAAGTAACTAATATTAATTTCTCTCTTATAGCCGTAAAATTACACGAC
CAAGAACTTTAAATTCAAATTCTCTTGTATAATTTTTAGAAAGGATTGATTACTTTCGTT
GAGAAACTCTCTTTTGGGAGCAGTTTTTCACCATTATTCGTTCAAAACCCTGTTTTCACT
TTTGACTAAATAAGTGTTACCTGATGTAGATTTCGTGATCATGAAACCTGTTCACCAATG
GATTTCCTTTCAGGTAGAGCTCCACGAGAGGCATCGATTTGATTGGATCCAACGAGCCGA
GGAATGGAATCCTATTATCACCCATGTACAAAATCTTTAAGTTTTTCAGCTTTGAAGGTA
AAACCTTGAGATGTTGCAAGCCATGAAGTTTATTGTCATTTAAGTTCAAAGCTTCCAAGT
CTGGAATGTTCTCGGCTATTATATCTATAGCAGCCAGCATTATCATGGGACGGAACAGTG
CACAGAAAATGTCTTCTAAATCTGGATCTGCATGGAATTTTGTTAAGTCTAGTGCCTTAG
TCGTAGGATTATATCTCTTTGCCATAGTCAATTTCATTTTTTCTTTCATTCCTTCATCAA
TATTCACATTTGGTACTGCATTTCGTACTATAGTGATCAGTTTGAAGCCGTCAGACATTG
TGATTTTTCTATCTGCATGATACAACTTCTCAGCTGTTTTCACATCATCAACGTAAAATA
CTGCAGCATTTCCATTTACTTTATAGTAATGAGGAATGAATATGTCAGGGGACAGATGGC
CCAATAAGGCTCGTAAGACGATATCTTTCTCATGCTTGGCTCCATATGGAATTATTATCT
GGTACCAGGGTAAAACACCAGGAATGAACTTCTTTTTCAGGTTTCCGTGACTGCCTTGAG
GTGCAGGGGAGTATAACCTGCCTCTGCCCCGGAAGGAACTCTTTCTAGGGGGACCCTGGC
CACCAGAGCTGCCCATGTCAATATCATCATCAAGAAGAGCCAATGGATTCTTCCAGTTTC
TGAATTTATTTTTGCCTTTAGCACCAGCCTTGAAGCTGACATGTCTGGGTACACTGTTGT
TGCGGTCATCGTGTTCAAAATGTTCATTATCAGCCTTCCAGTTTCTGTTTCTGCCACCTC
CACGTTTTGGCATCTTTTCTTTTGAAATTTTATCACAAGTCAACACAAGGAAAATGCTCT
CAAGGAAATTTGTTGTATTTTTTGAGAAGCGAACAAGGCAAAATAGATCTTTATAGGAAT
CGAAAAACAAAAACCTAAATGAATGAATCACACTCAGGTTTAAATGAAGTTTATTTAACC
TGTTTTTTAGGATTGTTTTTTCAGGCTTCACAAAAT
(1776 bp)

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