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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13712c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_03155_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:6.83 TPM:6.70
ORF EntryO_TrvaFAMAMG17039_5prime_partial:A_TrvaFAMAMG_TR13712c0_g2_i1
Sequence
(Nucleotide)
AACGCAGTGAAGTGAAGTATCACCCGGCAAACCAATTTATAAGACGTTGTCACGTCAAAA
TATTGAACATTAAATTTAAAAAGTGCATTTACATTTTTTAATAGGTATAGACCATAGAAG
TATCTCAAGTCCTACTAAAGAGTAGCATTTGAAACCTTTTGAAGACCTTCAGACCTTCTT
GTCATTTTAAAGTTGATATAATATATTCTACTACGTACTACTAATCAAAATGAAATCTAC
AAATATAAATGTTTCAAATATAATGACTTTAACAGACATTTTACGATTCGAAAAATAGCA
GTAATTATTTTGTATTGCACTAACATATGCATTGTTAAAGTGCGCGCACACCTAGGAGGG
GCAGGCCGCATTTTTTACAACAGGCTAAGTTACGAACCCTTTAGGTATGCACGCACTTTT
ATAACTGTAATTTCCAATGATACACAACATAAACAATCGGTTTTTTCATTACACAATATT
ATTCGACCCTCTACTTGCAACTTATAGTAAATTTGAAAGAAAAATAACAAATATAGGCAC
AATAATTCTAAAATAAAGAAATTACCGCAAAATATTACAATAAAAGTAGGTAACTAACTG
TAAAGAAAACTCTTTTTAAACTCAAACAATTAACTTCAAGATGTTCACAAAATTATTATG
CACAGATTATTTTTTTTAAATTACATATAACTATCAAGAAATGATGAATTAAGTTAGAAC
TTTAAAACGACCAGCATAAATTTGTTTTCCATTCAACTACTCGTAACCAACTTAATTCTC
ATTTCAAAAACACTAAACATTCATTATTAAATTTTTGCACTTACGTAAAAAAATATCTTA
TTGCTAAATCTAGCAACTATTGTCCTTAAAAATACATTTCAATTGCAATGTTCATTGCAA
CACACATTCTGCAAAACTGTACTTCATTTAAATTTTTGACGATTTTGACTTCAAAATTTT
TATTTTCAGTTGTTCTATTGACTTCGTACAATTTTTGATCCGTTCTTCATATTTGACACA
CAGAATGCTTACTTTCCATTAGTAAGACGTTTCTTTCTAGTTTCAACTCGCACTAATACA
TTATAGTATTGATAGTAACACTTGCTTGAGCAGTGTGAAGTCTCCTTGAAGTGTTTTGAT
GCTTCAGATCCAAGTGAGCTGATTATATGTGCGTTCATCAAGCATTCAAATGTAGATTAC
CTCCTGGTAGTATTATGTACTTGATAATCCATTTATATGACTGGTTCTGTAGATAACTTT
TTAAACTCCCTTCTGAGTTTCTTTATAATCACATTATCCAAATTCTTTTGTTTTCATAAT
CTGTATCAATTCAGCCACAATTTTCTCACTTTTTCACTCTTAATTTATACAAACTATTTC
ACAGTTTCATTCTTCTTCACATTTATACAAATATACAAAATTCTCAAGTTCCTATTACTA
AATTGATCACTTAACAAATGCTTCTGGAGGTATCTTGCCTTCCGATTGTAGTTGGTTGAA
TATGAATAAAGCACGCTGTAGATCCCAGCCGGTTTCTTGTAGGCAATTTACGCTCCAGTG
TTCATTCATTCCAGTCTGTTGTCCCAACATGTTAAGGAATTGCATTTTCTGGGCATCATC
TACCCCAGCTGTGGGTACGGGTGTGGGCGTCGGCGCCGGTGTAGGAGGTGTGGGCTCGAC
AGCGCCCGCTGAGAACGCTTTGTCCTCCTGTTCCTTAGTAGTATTAGTAATATACAGCAT
GTCATTGATGATTGAGAAACCACCGTTTGCATTAGGAACTATAACAAAAGTCCGATGAAA
TGATCGCATCGGATTGCTTGGTGTGTTGGTCTCTTTGAATACACCATTCATTGTGAGGAC
TATCATGGCAGGAGTAAATACTAATAAATCGACCGCAAAACCCATTAGATCGTGCGTAGT
TTTAGGCAGATCTGATAAAAATGACACAACTTGTAACCTTCCAGTTTTTAAATATCTACG
TCTTGATTCTCGTTCTGTTATGCGGATTAGATTTCGACTATTTGATATGTAGGAGTTTAA
TCTAGTGGCATTGGAGTTTCTGCTGTCATTCGTCAAATAATTGGCAGCCATTGACATAGT
AGCGTTTTCGTGGTAGGCTTCAAGAAGGGGTTGTCTTGATTCAGAGTCGTATAACGCATA
ATACTGAGTCAAGAACTCCCTGACCAGATCCTGTCCTGCTGGGTCCACTAGGAACGACTG
TTGGCGCGGTGGAAGCGATACTTCTTCTGATACGTCGAAACCAATGGCGGGGGGTAGGTC
GGCTCCGTCCAATCTTGCCAGTTTGGGAAACTTTTTCCGGACATCGCTGATGTAGATTTC
GTGATCATGAAACCTGTTCACCAATGGATTTCCTTTCAGGTAGAGCTCCACGAGAGGCAT
CGATTTGATTGGATCCAACGAGCCGAGGAATGGAATCCTATTATCACCCATGTACAAAAT
CTTTAAGTTTTTCAGCTTTGAAGGTAAAACCTTGAGATGTTGCAAGCCATGAAGTTTATT
GTCATTTAAGTTCAAAGCTTCCAAGTCTGGAATGTTCTCGGCTATTATATCTATAGCAGC
CAGCATTATCATGGGACGGAACAGTGCACAGAAAATGTCTTCTAAATCTGGATCTGCATG
GAATTTTGTTAAGTCTAGTGCCTTAGTCGTAGGATTATATCTCTTTGCCATAGTCAATTT
CATTTTTTCTTTCATTCCTTCATCAATATTCACATTTGGTACTGCATTTCGTACTATAGT
GATCAGTTTGAAGCCGTCAGACATTGTGATTTTTCTATCTGCATGATACAACTTCTCAGC
TGTTTTCACATCATCAACGTAAAATACTGCAGCATTTCCATTTACTTTATAGTAATGAGG
AATGAATATGTCAGGGGACAGATGGCCCAATAAGGCTCGTAAGACGATATCTTTCTCATG
CTTGGCTCCATATGGAATTATTATCTGGTACCAGGGTAAAACACCAGGAATGAACTTCTT
TTTCAGGTTTCCGTGACTGCCTTGAGGTGCAGGGGAGTATAACCTGCCTCTGCCCCGGAA
GGAACTCTTTCTAGGGGGACCCTGGCCACCAGAGCTGCCCATGTCAATATCATCATCAAG
AAGAGCCAATGGATTCTTCCAGTTTCTGAATTTATTTTTGCCTTTAGCACCAGCCTTGAA
GCTGACATGTCTGGGTACACTGTTGTTGCGGTCATCGTGTTCAAAATGTTCATTATCAGC
CTTCCAGTTTCTGTTTCTGCCACCTCCACGTTTTGGCATCTTTTCTTTTGAAATTTTATC
ACAAGTCAACACAAGGAAAATGCTCTCAAGGAAATTTGTTGTATTTTTTGAGAAGCGAAC
AAGGCAAAATAGATCTTTATAGGAATCGAAAAACAAAAACCTAAATGAATGAATCACACT
CAGGTTTAAATGAAGTTTATTTAACCTGTTTTTTAGGATTGTTTTTTCAGGCTTCACAAA
AT
(3482 bp)

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