SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13706c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_TrvaFAMAMG17023_5prime_partial:A_TrvaFAMAMG_TR13706c0_g2_i1
Sequence
(Nucleotide)
TGGAGGAGGCCTATGTCTAGGACTGGACGTCTACAGGCTGATAATGATGATGATGATGAT
GAGTCTTAGGTAAAAGTTGCAATACTCCAACTGACCTGGCAGTACAGGGTCCATACGAAA
GCGTCGGCTATGAGGCGTCGTCTCCGTTGATGTGCGCGCCGCTCGCCGTGTAGAACAGCA
CGCACGGGGTCTTCCACCATACGCCGAAGTGGATCACCTCCTCCGTACTAACTGGGACGA
TGCACAAATCATTAAACATAAACCACTGCGTCTCCCCGTCTTTGACCGTGTGTATGTAAG
CGACCAAGTTCTTAGGATTATCTTCGACGCAGACGACGGCCGCGGACAGTGAATACTCCT
CTTGTAGTTGCGTCGTTACGTATTTCTTTTTATGTTTGCTGGTATCCGGTCTGTTGATGG
GTGAACTTTCTGCTGAACTCGTTTCGATCTGAAATAATATTAAAATGGTGTATAAAAACG
T
(481 bp)

- SilkBase 1999-2023 -