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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13701c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_fragile_X_mental_retardation-interacting_protein_1_[Papilio_xuthus]
Ontology
GO:0000492 P box C/D snoRNP assembly
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005726 C perichromatin fibrils
GO:0005730 C nucleolus
GO:0008023 C transcription elongation factor complex
GO:0016363 C nuclear matrix
GO:0022626 C cytosolic ribosome
GO:0030515 F snoRNA binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051117 F ATPase binding
GO:0051259 P protein complex oligomerization
GO:0070761 C pre-snoRNP complex
Transcript
Level		FPKM:4.99 TPM:4.88
ORF EntryO_TrvaFAMAMG17012_complete:A_TrvaFAMAMG_TR13701c0_g1_i1
Sequence
(Nucleotide)
AAAAAACGTGCCAAACACAGCATAAAATGCGAATAAAGTAATTCTGTAAAATAATAGATT
AAATAGAAGACTTAATTACATTCCAAAAAATCGATTCGGTTTTGTTCTAGTTTTTGTAAA
AGTTGTGGATATCATAAATTATATTGTATCGCAGTAATTCTATTATGTACAGACCGCCAC
AACCAAAGATGATGAACTATCCTCGATTTTGCCATTCTAACTATCAAGGGAGTTCCAAAT
TTGCTCCATATGGATCTCAGTTTAGAGCCGTATCCTCACATTTCACGTATCAAAGTGGAC
ATAATCGAATAAGACCTAATTTAAGTTATAATGAAGACTACTGGTGCGAAACTTGTGATA
GAGGTTTTCCTACACCCGATATTTTGGAGAAACATAAAAGTCGACACGAAAAATGCAATA
TAGATGGATGTGAATTTGTAGCACATCCAAAAATTATAACACGGCACATACAAATGCAGC
ATTCTTCTGGTCTTTACAAAAAAATCGCCAAATTAAACAATCCTGAAGAAATACAAAAAT
GGAGAGAAGAACGAAAAAAAAACTATCCAACCCGAGCTAACATTGAAAAAAAAGTTGCTA
TGATTAAAGAAAAAATTGAGAGAGGGGAAAAAATGGGACTCTCAATAGACAAGAATAAGA
CCAAATTAGACAACAAAAAATTAGGAGTAGGCAGAAAATACAGCAATGAAAACAGACAAA
CCAAATACAGTTTAAAAAGAAGACAGCCAACATCGCAAGAAGTTGATGATAATAAAAAAC
ATGAAATTAAAGATCTACCCCTAAAAAGAAAACTAAGAACACTTCCAGTTATTGAAGAGC
CACGAAAAATAAAACCATTCTGTGGCATTCAGGATATAATAGTAGAAACTTCTGTTGATG
AACCAGTAATGGAAACTAACAATATTCTGATAGAAGATGATGATGAAACTGTTCCTGAAA
CAGCACCTGAAGCAAAAAACATAACAGCAGACTCTATTGTGTGTACTGCTTTATCTTCTC
TTATCTGTGACTATGGTTCTTCTGATGAAGAGGAAACTACAGTACCTACTTTAGATACAA
AAAAACTCAATAGTAAATTCCCAGCCAGACCAAAATACAAACAATACTTTTCAAGTTAAA
GATGTCATAAACTATTCAAAAGACTGTAAAGAAGTTCCAACAGAAGATAGCAAAAACTTA
CTTTCTGATGATGACAGTGGACCGGAGGAAGTAGGAATAGTTAAATCAGATATAACAGAA
ACTTCAACAACTGAAAATCCATTACCTACAGAAAATAAAGCTCCTATTAAAATAAGTCAA
AAATCAAATGTTAAGCCTAAGAATGTAATTACAAAACCAAGATCAATACCCTCAACATTA
TTGCAAAAACTACTGTCTCAAGAAGTGAGGCAAGAACGTAACATAGTACTGCAATGTATC
AGATATATCAGAAGAAATAATTATTTTGATAAGTAAAACCTGTGCCAAATTAAAAAAAAA
(1500 bp)

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