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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13674c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_1-phosphatidylinositol_4,5-bisphosphate_phosphodiesterase_gamma-1_isoform_X2_[Papilio_xuthus]
Ontology
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008081 F phosphoric diester hydrolase activity
GO:0008180 C COP9 signalosome
GO:0009395 P phospholipid catabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0016042 P lipid catabolic process
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030971 F receptor tyrosine kinase binding
GO:0035254 F glutamate receptor binding
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043536 P positive regulation of blood vessel endothelial cell migration
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051281 P positive regulation of release of sequestered calcium ion into cytosol
GO:0071364 P cellular response to epidermal growth factor stimulus
Transcript
Level		FPKM:0.61 TPM:0.60
ORF EntryO_TrvaFAMAMG16946_complete:A_TrvaFAMAMG_TR13674c0_g1_i1
Sequence
(Nucleotide)
TAACGATCACAATACTACTACTAACAATTAAATAATACATTTATAAAAGCATTGATCTAA
ATATTTTGAGAAGACCTCTAAAAATGCAAGTTTAAATGATTGATTACTACAATTAAATTT
AAGCTGCTACATTTTAAAATGAACTGTGGCTTACGGACATAATCTAACGTAATAATAATT
TAGCCACAGACCACAGTCCAAAATACATTCATTTGTAAAACACAAATGTAAAATAATTGT
AAAATGCAAATTTAAATACAGCCGAAAAAAGCATTGTCTTTTGATTAATCTCATAAATTT
TGACACCGAATATACATTATTTTTGTAACTTTATTTCAATCCTAAAACTAACACTTAACA
CTTATTTCACTAAATTCACATTTGTCACTCAGGAATGTCCATATTTAACAATTTATCTAC
TTCAGAGAACGTGATCCTACTGTACTTTAAAACAACTATTACCTTTGCTTTTGCAAAAGT
ACCCTCCAGAAATCGTCCTTAGTTGGGAACGAAGACTTCATCGTCGCTTTTCCGTTATTT
GTGGCAAAAAATCACAATGTTTATTTTACAACTTTATTTTTAGTACAAAATGAGTTATAC
TTTCTAGCTAGAGCTATACTATGAGTTATGTAAGATTATACTTTGTATAATATTCCTTTC
CACTTTGATAAATACATTTTATGACCAAATTCGGATTGCTAAAACCAGTCATTTTTTATA
AATTAGTTATCATGCGACATCTTGCGGCAAATTTGTTGAGTTATTATAATCGAAATTGTT
TACGCGCTGACAGATGGCGCTAAAGTATATATAAATAAAAACATGTCAACATCGCGATAC
CTATTTGAATTTAAAAATTTCGAATGTAACTATTTGCAGTATTAATACATGAAATACTAT
AAACAAAGTTGTGAAATAACGAAAAATGAAGCTCACTTATGGTCGGCTCATAGGGAACCA
ACGATAAATAAGATGTTCACTTTTCTTTTTGTATGGAAGGAAACGCCTTCCAATATATGC
TACAATACGTTCTGTTTGCGTGCGACGGCGAGTCTTACGGCCCAACTCCCTGCCCTATCC
TTGGAAAGGGAGGTAACGTTCTCTGAAGGGGGCTAATTCTCAGCGTTCCGTTATAAGTGA
AAAATGAACCATCAGGGTGGAGAGCTCGAGCTCTTCCGAATACGCGTTAGTCAACGGCAC
ACTGCGGTATCCTTTGCGAAGGCATAGTAGAGGGAAAGTTGCCTGTCCGATGAAGTTCGG
TTCGCCGAATATGTCTTCGTCTTGTACTACGAAGCGAATTAGGGCCAATTCTGGATTCGC
GACTTCGAACTCGCAGATGTCGTTCCATAATGGATTCAGGCCATTGTCAGACACTGTTTT
AGTAACAAGTTTGACGCCACTGTCATAATCAGCTCCAATGATTTCGACCTCGACGAATGG
ACTAGCCGTGCCGCGACCCGTCTTGCATAGGTGCCTCGCTCCGACTACGCGCAGCATCAC
AGTCACCGGCTTCACTTTACCCTCAATTGACTTCTTGTCAAACGGATTATATCCTTCCTC
GAACATAAACTGAGGCTTCAGAACAAACCCACATCCTCCATTCTGTTTGAACTTGCCCAT
GTTCACTTGCATTGGCTTGTCGGGCGTCTGATAGTTTAGTGCGACCATTTGAGAGCCGCA
GTTCCAAAATGGCACCGGGTTGTAGTTGGAGGAATCGATTCTCTGTCCTTTGGGATAAAT
GCGACTGAACTGCGTCGTGTGGTACTTGACAAAGAACGGGGTCTCTTGCTGCGACATTAG
CCGATCGGCTTTTGTCTCTGGGAATGAAGACATTTCGTTGTAAACGAAGCCTTTGATGCG
CAGACGTTCGATGTTGAAAGTGACAGAGCGGCAGTATATGATGAGGTCGGAGATCTCTTT
AGCTATACGCCAGATGCGTTCCATTTTTCTGTGTTGCAAGGAGCGGTTGGAGGCGCTTTG
TGCTGCGACTTCGATGGCTCGCAGCCACTCGATGGCGGACTCCCTGGTGGGCGCGGCCAT
GTCGAAGGGCGAGTACATGGCGGGACTCTGCACGCGGACGAGCCACCGCGCCGCGCCGTC
CCCGTCGCCGACCACCAGCTCCACGATGGCGCCCAGCACGTCGACCACGCCTTTCTGCAA
CGATCCCAGGGCGGCTGACTCGTTTTCTAGACCGCCGGTCACATCGGGTGTGTGAGGCAC
CTCTATTTCCAGCACGTAGTTCGCCGGAAACCAATGGTGACGTTTACCGCCATAATCTCC
ACGCCACCAACCCTCATCCGGTTTGTCGACATTGGTAATGATAGCGTGCTTGCAGAAAGA
CAGCTCGTCGTCTTGACGCGCACGGTAGTCGTATAAAGCTTTTACGGTTATCTTAGAAGT
AAACGACGTAGGATCCATATATCCTGGTGTACCGTACACGGTGTTATCATCAGGCTCCGA
AACCAACCGCCTGACAATTTCTTCGCTGATCGGGTACCAGAGTTTCACTTTCTTGTAAAG
GGGATGATTTTCATAGTAAGACACTAGTTCGACAAGACTTTCGAATTTTACTGTGCCGAT
GGTGTAAAGCCGGCCTTCTTGCTTGATCCTGCAGTGTTTTATCTCTTTTTCGGTCCTGAA
ACTAATAGCAAAGCTGCCATGTTCTTTTTCGCTTGGCCGCACCAGAAAAGCGCCATCGGT
ATTAGTTTTCCGCAGCAATTCTTCAGCTTGAGCGCGGGTGCAGTGAGCATGGAACCACTC
CTTGCCTTCATGCTTGTTTGGTTGAGGCACCGGCTCTTTTAAAGTTATCAGGAACAAGAA
CGTTCCATCGCCAAGATGGGAGTGAGCCCTCAGAAGATCTTCAGCTTCTTGTCGGTTGCC
GGCCAGCTTCCCGTGGAACCAACACTCAGCGAAGTGCAATTCGTCTTGCGGTACGATTAT
ATTCTCCGCATCCGAATCTCCATCGCTCTCAGTGTCAGTTTCCTCTTGACTGTTGTAGCT
CTCGGTGTAGTAAAGCTTGTTGTCGGTGAGTACAAAAGCGTGTGGCTTCCATTCCTTGTC
AATCGGATCCTCTAAGTGCAGGATACCGTTTTTGGTGGAATTTCGGAGATCTAAGTCTTT
TCCTTCCTCTTGGCGCACTGCAAAAGAATTTTCTTCAGCTCCTTCTGGAAGTTTCTTGTG
CTTCAATATTATCTTCCTGCGAAGGTCATGGGGAGACGGAAGAGCCGTTTCATTCTTATC
AACAGGATGAATAAGAAGTAAATCACCGAATACGTCTTGGAAAGCACTCGCCATACGCCT
CTGTTGTGGGAGAGAGCAATTATCTTCTATAGACAATATGAGCGGATAATCAGACGTGAC
AAACGCATGTTCCTTGATTGTTCTCAGGACATCCATAAACCTTATCTTAGTTGTGAGCGT
ATGCCCGTGATATATGAAGGGAGTGCCATCGGGACCGTCCCAACAATCCAGTTCAATACA
TCGGCAGCCCGATCTGAGACATCGGACATAAGCCTCCAATGACGACTCACTTGAAAATTG
GTCACCAGTTAAATACGTATTGTGAGATGAAGATATCCAATAGTGTGACAAAGGTCTGGT
CATGTCTTGAGTGATCTTATCATACTGGCTATCATAGATTGAATTTTGCTTTGAAAACAA
CATCTCAACAAACTCACTCAAAGTAAAATATGGTTCGTAGATGTCTCTTTGTGGGTCCCT
CAAGTAATCACGTATAAACTGAGAAGCCTGTACTTCATCATCACCGAGTGGATCATGCTG
TTCATCTCGAAGGAAGTTTTGAAACTCTTTCAATATTATGGTGGTACCATTAGTACAGTA
TAAGGAATACTTGTCAAATATGTCTTGGACATTATTCTCGTCAAAGATTAACTTCTGATG
GAGAAGAGCAAAGTCATCAAAACCAATTTCTCCCCTCTTCTCAGTGTCAACTTCTTGAAA
TACATCCCGTAGCTTACTTGTTGAAATTTTACAGTTTATTTTAGGAAGAAATGCCTTTAC
TTCTTTCAGTGTAATTTTTTCATGGGCATTTTCAATGGCATAAAATTCTTTTCTAAGCCA
TCTCTCAATCTGTAGAGGATATGATGCACTTATAGCCTCAGCTATCAAGAACCTCACTCC
TTTCACCCAAGCTTCACATTCTTTATCTGTTTGAGCCACAAAAGATGCACTGCGAAGTTT
AAATTCTGTTCCATAGTAAATGGTGAAGCACTTTGAACTCTCATGGCGCTTTGTTTCTTC
GGGCCACCGCTCAAAATCCTTAGACGACTTCCCGATGCGAACCTCTTTCACATCGCGAAT
ATCGAGAGCTCCTTCATAGCCCTGTCTTTGCGCATTGATTCGCGACCAAAGAACTTGATG
GGTCTCTCTTCTTACGCTAAGCGATCGCCTTTCAGGTCTTTTTCTAGGGAAAAACTTCAC
GACCGTAGAACCTCTCTCTATGTGAGAAATAAGCTGGTCTGCCTCGTGTATGAGCCTATC
TTTGGCCCCGTTGTAGCAGGCCGACTTCATTGCACTTCCGCCCTCGCCGCCGGATGCAAG
CAAACTGTGGCGAAAGTGAACAACGCATGGAATAAATACGACTCAACCGATATCTCTACA
TGTAAATAATGTTTTGCTACTGTGTAAAATACATTTTTATCGGTATTTCTTCACTACACA
CTGTAATATTTTGTTTGTTTGACATTTCCAGATCAAAG
(4718 bp)

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