SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13662c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_C-mannosyltransferase_DPY19L1_[Amyelois_transitella]
Ontology
GO:0000030 F mannosyltransferase activity
GO:0003824 F catalytic activity
GO:0005637 C nuclear inner membrane
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005975 P carbohydrate metabolic process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
GO:0030154 P cell differentiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.22 TPM:0.22
ORF EntryO_TrvaFAMAMG16889_complete:A_TrvaFAMAMG_TR13662c0_g1_i4
Sequence
(Nucleotide)
CATGAACCTCTGCAAAAAATAAAACCCTCAGCCTTACCTAGCCTCAAAATGCTCGTAATG
TGGATGAGCCACAATTGGCCGGCGCGTGGTCAGCAAAACAGTAGCCAATATTGGCATCGA
ACCGGCAAAGGCAGCCGTCGGCGAAGTTTCCGTTATAATCCAATTCAAGAGTTCCTCCAG
AGGTGGATCGCTATATTCACCTCAAATTAAAATCAACCTTATTGTACATACAGCTTAACA
GATATTTGAACGTAAATATTGGTCCCTCGAGCCGGATATAACGATGAAGGAAATTGAACT
TCTAAAATACACTAATTTTAAACAAACTACAAAAATAGAATCTACACCAACTTTACTAAA
TAAAATACAGTAAGCAATTAATATAAAATACTTCGTCCTAAAAAAAGTTACAAAACAATA
ACTAAACAGTACAATGATTGTAACAGTCTTGGTCCTTCGAGCCGGATGTGTAGTGTAGCG
CAAAAAAAAAAATTCGTTTAAAAGACTTACCGACATGCGACAATTCCTTCGACACATTAG
TGTACAAACGTAGTATCAACGCCCACGTATTGCCAAAAATTATAATATATTTTAAGTACG
ATTTCGTGTTTTTATAATAATCGAAATTGAATATTAAAGATGCAACCACACACATTTGTG
GTATTAATAACAATTTCAATCTCATAATTAAACCCGCCATGACACCATAGGCAATTAATA
AAAGAAAATTATAACAAATCGCCGGATCAATAGACAAATTCTTCATAAGCAACAACCATA
AATCGATTTCCTTTTTATTCGATACAGCCCCATCCCTATCATTATCGATACCGCTATCAC
TTCCCTCGTCCTTATCGATTTTCTTATCGATTTTTTTCTCGATAGCATTCGATGATTCAT
TTATTACAAAACTCGATACTAAAACGATTGCTAAAGCTACGGTAGGTAACAAAGTTGATT
CGATTATTCGATTCAAAGTATCGATTGGCAGAAAATCGAATACCTCCATACACGTATAAA
TCATAGTATGAAAACTTTTGTAACTCGTAAATTTAGCGAGTAAAATCTCAAATATATGGC
TGTCCTCTTTTAGCTGAAAGAAATTTCCTATCAAAGTTTTCGTGTAGAAAGAGAGGCAAA
TAACCAAAGAAATTCTAAGTAAAACAAGCCATAGTTCCACGAAAAAATCCACGCGATTTT
CGACCTTAAGTTTTAGAGAGCTAAAGAAGAGAGCGTATGCAGAAATCACTACGAAAAATG
AGGCATATAAAGACGATTTTAGCATATCATTGCCCTGTAAAAGCAAGATGGCGGTTTGAA
GCCCGCAAAAGTGCGAGTGCAAAAAGATGCATAGAGTTTTGTTGTCTATGACTCGGATTT
GCTCCATAAAGAAGAATATGGCTATTTGCGTTAGAAAAATGAATTGGGTGAACTGCCAAA
ATAAAAGGCAGAGACAATTTAAAATGAATATCGAGACCTGCAAAGGAAACGTCTTAGTTC
TGTTCCTATCTCTCAGCTGCACGCTGACGAGCCAACACTGCAGTATCAGTAAAGGGGCCG
CCATGTTTTCCCTTTGGTTAGGGCTCCACATGACTCTGGTACAATCGCTGTGGTTAGCGA
AGTACTGCAACACTGTGAATATACCGCCTAACACGCTGTTACTCAAAAAAGTAGCGAATA
GAAACAGAGCGCTCACGTTCAAGCCAGCCAACCACCAAACAGCTTCGAGGTAAAAATATA
TAGGCTCCCCAATCCCGATACAACTTTCTACGGGGGTTAAACCGATACCCCTATCGACTA
TATGACATTGTCTATACGCTGTTGTGTTTATATGCATTTCGAAATATCTGTAGAGACCTG
CTATAATTACCTCCGGATGTATATTAAATCTATTAAATGCATTAACCTCTTTGGGATGTT
CAACGTATTTATCAAACATGAGTTTAGATAAGCCTGCTACGAACGGCTTCTCGTTGACAA
GAGTTTTATAATAAGAGTAGTAGAACCCGCTTTCTGTTCGTAGAGACATCTCTCTCTCCA
GTTCGGAGAGGTAGGCAAAGTTGCGGTCATTCTCAAAGAGATGGGACACGTAGCGGCTGT
GGATGTAACCGACGAGGAGGGCAATTATTGCGATAATAGAAAAATAAAACAACTTTTTCT
TGTTTAAAACTTTTGGTTTCGGAAATTTTTCAACAACGTTATCTTCTGCCATTGTTGTAA
TTAATTAAACATTATTTAAGTGTTCTCCCTTGATTGTAGTATTTGCTTTTCCGTATTTAA
TTTATAAATAACTTTAAATATTTAATTTCTGAAACTAATTGACCTCCGG
(2329 bp)

- SilkBase 1999-2023 -