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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13651c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007409 P axonogenesis
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048167 P regulation of synaptic plasticity
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:4.05 TPM:3.97
ORF EntryO_TrvaFAMAMG16858_complete:A_TrvaFAMAMG_TR13651c0_g2_i1
Sequence
(Nucleotide)
GCGAGTTTCTCGTTAGTTTAAGTTTCTGTTGACAAACCTGCATTACTCATTGTTTCAATA
ATTATTTCAATCAAAAATATTTTCTATTAACTTAGTATTTTAAGTATAATATGTATTAGT
GTGAAGTACTATTATAATGGAAGGATTAAGTCAAAACGAGAAAATAATATGGTCTTGTTG
GGAAGAGAAATCACCTAGAGATGTCGTAAGAGAAGCAGCAGCTAAAGGCACTCATCTAAC
ACTGGCAGTTAAATATTTGATGGATAAAAACTCTTGGAATGAGGAAAGTGCTCGAGACTG
GTTTGTTACAGAGGTAAAAGTATGGACAGTCCAGTTGTTGCTAAGAAAACAAATCTTCAA
AGTTTTGCACATATTAAACAAAGTAAAAATAAATCCAGAAGAGCATTTGATGTCTCTCGC
CAAAACGTCAAGCTCTATCGAATACAGGGACTTTCTCGTTGAACAAATAGAAAAGATATC
AAAAGACATGATACCCGAAAACATTCTGAAATGGTTAGATTTCAAAAGACACTGGAATTT
GTTGAGATATTTAGAAAAGTCCTTTGAAAGTGACGGAACATACAAACAGAACAAAGTGTT
TGGTGCAGGCAAGGACAGGATATTTGTAAATGAGAGTGAAGTTAAGGCATTGACAATAGA
AAACATTGAAAAATACCCTTTGCCGTGGAAGAGTAAGATTGCTACAGTCTTGTTTTTCCA
GTCATTTGAATTTTCATTATTGGATTTTTCAAGTCCTGAAGAAATGTGGAGTCATCTTGT
TGAAAAAAATAAAGCAATGATTTTAGTTCGCTGGATAAATATTCAGTTATCAGAAGTGGT
GCGAGATAAGAATGCTCGTTATAACTTTTTCAATAATGAGGGTTTTGTACAGAAACTACT
AAATGTAGATACAACTGGATTTGATACTAAAGTGTTGGACAATTTAGACGAAGTTTTTCG
CAAATGGTCCATCACTCCAGAAATGATATCCAGTGTATCGACTAGTCAATGTTACCCCTA
CACTAAAATGTGCATTTATGATACACTTTGTTCATATGGCATTGTTAACGACGACGAACG
AGATAATTTATATCAAATAATTTCGAGACTCGCTCGTACTCAGAATTTAAAACTAGTAGA
TGACATATTCACCGAATCTTGTTCTACAATAACGAAACAACATTTTTATGTTCAGTTAGC
TAAGTACTGCGTAAAAAATAAATTGTATAAAGTGTTGACTATGTGTGTGGAAGGTCATAT
TCTAGACACCGATTTGACTGGTGTCGAGCAGGAAGCAAAGGAATGTATTGAATTGTGGTT
GTTATTTAAAAGTATCGAACAAACTTCCGACCGTCAGAGTCACGTGCTTCCAGTGTATAA
GACTTGTGAGCAAATTGCCAAAGACAACATAGACGATTATATCACTACCAATCCTCATTT
AGTTCTAGGAATGATTTTATTAGAGGATTCTACAAGACTATTTGATATATTTTCTAAAGA
AGATCATTTACACTTTACCGATTTTATGATACCAAATAAAATTTATAAAGACAAACTTCC
CCATCTTCATAGTGTTTACAAAAAGTACTCTGATGTGAATCAGATGTATGATTCCAAAGA
TGTAAATGTTTATCAGTTATTGTCCGGGTATAGAGGTTTGGATGTTTCAAAAATATTCGA
ATTTCAATTGATAAACCAAACCACTAACAATCTGGTGACCGAGAAGCCTGATCGACGCAG
TCTAGGGAGTTTATTGTCCAATGACGTAGATGTAAAGACAGCGTGCATCAAAGCCCTGTC
TCAAAAAGGAACAGAAATGCCAGACTTCGCTAATGAAAAATTAATGAAGAGATTTGGCTA
TGTTGCAAAATTGAATCATCTTTATTATTTAAAACAATATCGGCCGTGTAACGCGAGCCA
AGCCTTTGTAGCTCAACAGTATCAGACGTACAATCGTTTGCAAGATAAAAGCATTAAGAG
TGCTTGTTGCGAGGCTCATGCTCTGGCTTTACAGAACTGGATTGACCCAGCACTTACAGC
TTGTGCCGTTTCATTCGTCGCTATGATTGGATGTAACCCAACCAGATGCAGAGTTCATGT
GTCAGCTGCGAATATGATAAAAGACCATTTGAGGAGAAATGGTGCAGCTGAAGAAAAAAT
CAACAAAACTGTCAACGAGTATATGAATAAGCTCATTCAGAGTAGTGAAGACGCTATGAA
AGATATATTGAGCTACTTGGAAGAAATAACATTTCACATTCTGCAGGAGAAACAGACTAT
TACTGGAAAAGTGGACATGTCTGTTGTATTGTACGAATCACAGACTATGGTGAAATTCGC
CATGTTACATAACTTACCTCTTCCCGAATTGCAGCTTAAGGAGTTCATTAAAAATAATTC
TTGGTTCAATTTCCTTTTATTTGGCGACGTCTTCCGTTACCCCTTACAGCAAATGTTGCA
GCTATCACAAGAGTTCGAAAAACGGTCATACGCCGAGCATTTAAAGCACATCATGTTGCA
TAAAAATGGAGACGATACTTCAGACAAGGAATTAAAATCTCCAACGAATGGTCAAAGGCG
GTTGTCGAGACTAAATTCTGCTGAAATAAGTTACAGACCAAGTGGTCCAATTGATGGGGC
TTCTTGCGTGTATTTGGGTCGGGAACTGTGGGAGGTCGCGGCGGCTTGTCACGGCCCGGA
AGATCCACCGGCTGCGTTATTGCGGGCAGCTGAATTATGTAGAGAACCACTACTGGTCTT
GATTGCTAGTTGTTACGAACCTAACGCTGTGGATGTTCTATGGTCGCAATGGATCTTATC
CTCGATGGGACCGAACAAGCGTGCCTCGAAAGACATGCAACAGATCATAGGACAACAATG
TTCATCCGCTGAACAATTCCAACGAGTCGCTGAATTGTGTTTGTATGAAGGATACATTAC
AACTTTACACGAATCCATGCTTATCTTTATGCCGGATAGTCCACTAAAAATTCTGACAGG
ATTTTTGTATCGATGCATAAGACAGCACCATTTTGATTTGGACTCTAGCAAGTTATTGAC
AAGTTTCATTTTGCATTGCCAACGAAAATACAGTGTTGAATCTAATAGGCTGTCGTGGCA
AATGTCTAAAGAATCACTTCAGCGGGTAGCAGTGTCGCTAGTCAAGATTGCAATAAGCGA
AAATTTCGATAGTGCCTACCACCAAAGAGAGTTCTTGAAACTGTTGGCCAAAGCCGAGTT
TGGCAAAGACTTTTTAGTACCGTCACCAAATTTCGTCACCCTGTACGAAATTCTACAAAT
ATCTATGGAGACATCTGTTGTTATAAACGTTTCTAAAATGTTCGATGACGATTTTAAAGA
GCATCTCAGTGCTTCCGTCGACGTTTACATTTCTAATCGTAATTATGACGTCGCTCTTAA
AATAGCCAAGTTGTCAGACATTTCTATCAATAAAATATTGATCGCGGAATGGACTGACAA
ATACGAAGCAATTGTACAAAAACACGAAGGCATGGACGAGAAAGATTTAACACTCTTCAT
AACAGAGTGTAATGAGGGTTTTAAAAGAGCTGGCGTCACCTTCATAAACGCCATAGATTT
TTTGATGGGACACGCTACTAAAATAACCGATCCCATACAAAAATTTTACGCACTCAAAGT
CATCATGAATTGGTTCGAAGAAAATCTAGAATACGGTCGTAAACGCGAAGAAATCGAACA
CATGATGTGGAGAGCCTATTTTAAATGCGATCCCAACAATATTTTCTTGAGTAATTATCA
GAACACCTTACATTTCATACTAGCAGGACAGAAAGACAGAAATACGTCCAAGAACGTCGG
AGGTATGAACATTGACAAACCTTTTTCGATGACGTTAAATGAGATTGAGGTCGAATCAGA
TGTGGGGAACATTGAAAACATGGTTTTATTGGAAGAACCAGAAGCCATTGATAATTGGCG
TAAAGTTATATTCCAGCTTCTAGAATTGAGATTGATTGTCGATGCTTTTCGTTTGTCAGC
ATTGTTCAAAACTCCCGCGGAGTACAGATACAGGTCGCCGGCCTGTCCCGTTCAAATCTT
GAGATGTAGTTTGAAACTGGCCGAAGGAACGTGTTCCCCTTACGAACTACCACAAGAATT
GAGATTAGTAATATCATCTCCAGTTCTGCAAAATAAATTGTCGATTTCTGGTGTATCCGA
CGCGAGTTTCGAGGAGTTGGTAATAATTCAAGAGAAACAAGTGAACGCTCCTGAAAGTTC
GCACCTCGCGGCTCGCGAAGAAGCCGACCGGCTCTCTGCGTTGGACGCCTTGGCCGTGAG
AAGCGGGCTGATGGTGGCCAAGCAGGTAGCCAGTTACTTCCGGATAGCCCTGCAAATCGG
ACGGGATTATTTATCGGTGCTAAAGTATCAAAATAGAGCTCTCGATTTTATAAACTTCGT
TAGTGGAAGAGCGAGGTTGACGCTGGCGAACCTAGTTTTTAGGACTTTTAACATTCCTAC
TATACAGGTGGCTGAATACCTTTGCAGAGAAATGGTGGCAGCGATTATATCACCACATCT
AGTAAAAACATCAACTTTCAGACAAAAAGAGCATTTTCAGTACACACTATGGGGTTACAC
CATTAATTCCGACATCGAAATGTTCCTTAACATGAGACCGGACGCTTGTAGCCAAATAGG
GCGGCTCATTCTCGATCATTTAATGGCGTTCCAGAAGATTTACAAGGCAAATTCTGCGTC
GAAAGTTCCAGAAAATGCTTTGGACGACAGTTGCCTTGATGTCGAGACGTTGATCGATGA
GGAGTATCAGAATGTTGATGAAGAAGTTGAATCAGTGTTGACCGGTGAAGGTACCATGGT
GTCAGCTGAGACTGAGTCAATGTATTCAGTGTCGACTGTCTACGCGAACGGTAACAAGCT
ATCGAGAGACTCACGGAGGAATTTGTTCGATGTCATCACAAGGAACAATGTCCATGTTCG
ATATGAAGTCAAATCGAATATACGGAAAATAACTAAAGGCGCTAAATTGTCTTCGAAGCA
GGTGAACATAATATCGATAGAGCTGCTAGTGATGGCCCACGAGTGTTTCTCGTGCGCGTG
CGACACGGAGGGTGTGGCCGTGGCGGTGCGGTCCGCACAGGCGCTCACCTCGCGGCTACT
GGCGGCGCGCTCCTGGCGACTCATGGTGCGCCTGCTCACCGGCCTGGCGCGATACACAGA
GTGCGCCTACATATTCCAGGCATTAAGAGACAATCACCAATTCGAATACCTACTCGGACA
GTTCGACTACATGTTGGGCCAACAGCCGGACAAGATAGCAGAGTTCAAACAAGGGTTACT
GGATTTCCTCAAGACACATTGTCCCGGAGACACCGACACATACATCATGGTGGCATTACA
CTTCAACATGCACGCTGAAGCTGCTGGTGTTAAAAGAAAACAAGCGTTGAACTTGATTGA
AGATTTAGAAAAGATGGCTATAGATGCTGCTAGGTTGGTATCCAAAAAGCCATTCCAACC
ACCAGCATGGCTTCTTATACACGAGAATCCATCTACAAAACTGCTTCTCGAAACAGCATT
GAATCACTGCACAGACGCCGCTGAATTGTACCTTCAGGGCGGATGCACCGGGTTTGCGGG
AGAAATGGCCACGTTAGCGCAACAGATAGCCTTGCAAATATCGCTATTGAACGCGTCCCC
TACTCGACTGATACTGAATCGGACTACTGAGAAGACTTATAGACTTGTTAGCGAGTACTT
GAGTTTCATGGAAGGCCTGGTCCTGTTAGCGGGTCGGAGCGGCGAGGCGTGGCGTGAACT
CGCTTACAGACGGGCGCTGTCCAACGACCAGGCATACCTGCGGGACATGGTCGCGTACAG
GCCTGATGTAGCTCACGATATTATGAACAGATATAAAACAGAGAGAAATAAGACTTCGGT
ATCACAGGCAGCGATGACTGAATTGCGTAATCTCTGTAGATGATATAAGATAAAAATTAT
TTTGCATGTTTTTATTTGTCTTTTAAAATAAAAAATATATAAAAAATATGTAAAATTTGT
GCGATTGATATAATTGAAAGAATTTATATAAAAAAATGTTCATTGTGAAATTGTTAAGAA
GATTGTCTGTGATATATTTTTGAATTGACTGTGATTAATTCTATTTTTTATATTGTAAAA
GTGAGATGAATAAA
(6194 bp)

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