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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13649c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Amyelois_transitella]
Ontology
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.21 TPM:1.19
ORF EntryO_TrvaFAMAMG16852_5prime_partial:A_TrvaFAMAMG_TR13649c0_g3_i1
Sequence
(Nucleotide)
CTAAAATAAAAATTCTGGATCATAATGCTAACAAATCACCGAATAAACTATCACCAAAAA
AGGCTTGTTCAAATAGCCATAATAGTTATAGGAGAGACATCAACAAAACTCCCAAGAAGA
GTCCTATTAAAGAATTACAGTGTTCTATTTCACTCAGAGCAGAAAAACTATCTCCATCCA
AAAGTGGAGTTATCTTGAACAATGCTCTTGATTTTGGCATACATGATGATTTTATTGATG
ACTGGAATCTTGAAGAGGATATAATGATAGAAAACTTAGATCTAAGTACAATGCAGAGAT
GTGAAATAATGAGCATTATAGATTATGACAGTAAAAAGGAGCTTATACTGAAATGTGGAG
AAATGACTGGCAAATGTTACATTGAAGGCATATGGGTGTCCATTCCTTTAACTCAAGGTG
ATATAGTCAGTGTGATTGCATCAAAAAATGAGACTGGCCAATGTGTTGTGAACAATACTT
CTGGTCTGGTTGTGCTGAGGCCTGATCATTTGATATCAAGCACAAGTGTTGTAGCTGGTG
TGTTTTGTAAACGAAAAGCCATCCTGCAAGAACGATGGCGAGGAATAGATTCTGCAAATA
CTGCAATGACAATTGGAATAATGATTCATGAACTAGTCCAAAAGGCCCTCACCCAACAGA
TATCAGATATATCTCAACTTTGTTTAGAATCTGACCAGATTGTAAGGGAATCCATACATA
TGTTGTACGATGCGGGATTAACAGAGGAGGAAACACGAACAAACATGCAATCATACATTC
AACCACTTGCTGATTTCATGAAGAGTTACTTTGCTACAAGTTTGAACAATCGCATTGTGC
AGAAGGATAAAGAAAACTGGAATGGTGTTATTGACGAAGTTCTAGATATAGAAGAGAATT
TATGTTGTCCACAACTAGGGTTGAAAGGAAAGATTGATGCTACTTTACAAGTCACCATAC
ACAACAAAAAAGAGACACAGAAGGCTATAGTTCCGTTAGAATTGAAAAGTGGAAAGGCGT
CTGTATCAGCCGAACATTGGGGTCAGCTTATATTATATGGCATGATGCTCAGTTTACATA
GAAACGAAGACCCTACAAATGCTTTACAACGTGGTCTTTTACTTTATCTGAGAGATCGAG
TGGATTTAAGGGAAGTAAATTGTGGCTATCCAGAGAGGCGAGATTTGATAATGCTCAGAA
ACCAATTAGTTGAATACCTTTCTTCAGATCCTAATGACATTGATCCAGAACAGTTTGCAG
ATATTGAAGATGCTTCACTGTTACTTCAGCAAAGGCTTCCAGATCCAATCAATCATGAAA
GAGCGTGTGCTAAATGTCCATATTTAACACTTTGTTCTTTACATTTATGGCATTCAGGAG
GTCCAACCGTAGCTGACAGTCATCCACTATCTAGGCTGCAAGGAGATGCACTAGGACATC
TATCTAAAGAACACATAAAGTATTTTCTTCATTGGACTGCACTACTTAAAATGGAAGAAA
AAATTCAAACGAAATCATCGCCTTTACATGTTCTCTGGACTGAAACCGCTGAAAAAAGAG
AAAAAAGAGGCACATGCCTACCCAATCTTCGAATAAAAACAGTTAAACAATTGTGTGATA
GATATCATCATGTCTTCTCGCGCCAAGAGCTTTCTTTTAGTGAACCAAATCGGATAAAAG
GTCCCCAAGAAGGTGAATTTGCGATAGTCAGTATTAACAAAAGACCTTGGATAGCAGCTG
GAGTCGTACAACTAGTCAACAATAGTGAAGTACATATACTTTTAGAGAGAGACCTAAGTA
AACGTATGAACAAAGACACATTATATCACATCGACTCATACGAATCATATGCCACTACTG
TACAAAACTTGACCAATCTTGGAGTTCTCCTTGATGCCAGTGAGAGATCTGATAGACTTC
GAACCCTGATTATAGACAAAACTAAGCCTGAATTTGAGGTAAAGCTACCACGTGAAGTAG
GCAGGCTCGGTATAAAGTTAATGCGTTCACTCAACATTGAACAACAGCGAGCGGTACTGA
AGGCACTCTCAGCGCGAGACTACGCATTATTACAAGGTCTTCCAGGAACAGGGAAGACTC
AAACAATATCTGTGCTTATACAGATGTTAGTTGGTCTTAAACAGAAGGTACTTGTTACTG
CACACACACATTCTGCAGTTGACACTATGTTAAATAGATTACCGAATACAATAAAAGTGA
TGCGACTGGGATCAACAGCGCGTATCGCTTCCTCATCACTTCATCGAGCTGAGGAAAAAT
TAGCAGCGTCTTGTCGCACTGCAGAAGAACTAAGTCAGCTTTATGACTCTATGTTATTGG
TGTAACGTGT
(2350 bp)

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