SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13640c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_discoidin_domain-containing_receptor_2-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001503 P ossification
GO:0003416 P endochondral bone growth
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0008284 P positive regulation of cell population proliferation
GO:0010715 P regulation of extracellular matrix disassembly
GO:0010763 P positive regulation of fibroblast migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030500 P regulation of bone mineralization
GO:0031214 P biomineral tissue development
GO:0035988 P chondrocyte proliferation
GO:0038062 F protein tyrosine kinase collagen receptor activity
GO:0038063 P collagen-activated tyrosine kinase receptor signaling pathway
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045860 P positive regulation of protein kinase activity
GO:0046777 P protein autophosphorylation
GO:0048146 P positive regulation of fibroblast proliferation
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0070062 C extracellular exosome
GO:0090091 P positive regulation of extracellular matrix disassembly
Transcript
Level		FPKM:4.20 TPM:4.11
ORF EntryO_TrvaFAMAMG16817_complete:A_TrvaFAMAMG_TR13640c0_g1_i6
Sequence
(Nucleotide)
ACATAAATAAACAGTCTTAAGCAACCATCTTGTTCATTTACTACAATTTCGTTACTTTTC
ACGTTTTCAGTCGCCAAGCCAACAGGAAATAATGATGGATTTGAAGAGACGTCTTGAAAC
TACCAATGTTGTTGAATTCCCACGACACAGACTGCGCATGATATCGAAACTGGCTGAGGG
CGCCTTCGGAACCGTTTACGTAGCCGAAGCGGACGGCGTGCCCGAATATAACGGAACAAT
AACATCAGAGAAACGTTTAGTGGCCGTCAAGTTTCTATGCCACGACGCCACTCTCAAGGA
GAGGTATATAATGGAGGAATTTGAGCGCGACGTTCGCATTTTGGCGGCACTATCGTCCCC
CTATCTGGCTAGAGTATTGGGGGCATGTCGGTCGCCCCCATTGGCTGTTGTATTGGAGTA
TTTAGAATTGGGTGATTTGTGCGCTTTCCTGCGTACGGCGGTGCCCCCATCGTCAACAAC
TCTGTTGCATATTGCGACGCAAATAGCCGCCGGGATGCAGTATTTGGAGTCGCTCAATTT
TGTTCATAGGGATTTAGCTGCTAGGAACATCTTAATCGGAAAAGGGTACCAAGTTAAGAT
AAGCGATTTCGGCACAGACAACGAATCATACACGTGCGATTATTATAAGGTCGACGGTCG
TATACCGTTGCCTTTACGATGGGCCGCCTGGGAGTCCGTGCTTCGAGGCAAATATACTAC
CAAAAGCGATGTATGGGCGTTTGCTGTCACTCTGTATGAAATATACTCGCTGTGTCGACG
ACGGCCTTATGAGCACTTGACTGATTGCGAGGTTCTAGAGAATCTATCACACTTACAAGC
CGACGACGGTATGTTCGAGTGCATCGATCGCGCGCCCGGCTGCCCACGTGACATCTACGA
GTTAACCCTAGAATGCTGGCGCCGAGACGAATTAGACCGACCGACCTTCGGCGAAATCCA
CCTCTTCCTACAACGCAAGAGTCTCTCGTACGCGACCACGTGATGCAGGCAGGCCCGATG
CCCGAATCTATTCTCGGGCGTGGAATAGCGATCGCGTCGGGGCGATCACACAACAGTCGG
ATGCAAGTGCTACGCGATCGATGAACACGTCATGGAGACGAGGTTCTAAATCGTTGGTAG
CTTTGAACTTCTTTACGTGCTAATTGCGAACTGCTATGCGTTGTGTTTTAATGTGTTAAC
CTTTTGAATGCTGTTTTAGGAACTGCTGTTGCATTGGGAAATTTTCAGTCGATTCATAAT
CAATTTTTAATAAAGCTTGCGTATACAATTGTATCTCAATGATTTTTTGAAAAGTACTCG
ATTGGATTAAAAAGCTACTGTTTCTTTTGCAAATGCGTTGATATAGCTTGGCGCCCAACA
AAGTTCGCGTTGCAACAAAGAGGTTCAAAGCAAATGCATCCCGACATCGCTCCGTTAATC
GCTAAGTGATAAATATTGCTCCGGATAGTGATTATTAATAAATTGGTTATTTGTATTATA
ACCGTTTTCACATATATTTCATACGGATACGTTTGAGTTTTTTGTACTTAATTAGATCGC
TTTCACCCCCCGATCTGCTTGACGCACGCCGACGGTTAAACTAACAATCGATGCGTTTTC
GTGTGAAATATATCGTAGGTTAATATTTTTAAGCCACTGTAATCTGTTCGTGGTGTGAAA
CGTACTTATAATACGGTCAGTGCCCTAGTTAGAGTAAATTTTCGTAACATATTTATGCTA
TCAGAGATTTTTTTACACTTTATAGATATATTTTAAAATGTTCTTATATACTAGATGTTT
TTTTTTGAAGAGGTTATATGTATTTTTTTATTTTAATGTTCAAGTTATTTTCGAATTATA
GTTTTACTCTTCGCTAGACAATAGTAGAGTTATATTTATGGAGTAAAAAATGTAGGTATT
AAATTAGTACAATAATACATAGAAGTTATAAAGCAGGTACTGCGAACAGATTACAAAATA
GATTATAATATTGTTGTAATAATAGTTATAAAATCCTTCATGCCTTTCGCTGATTTATAC
AGAATTTGTAACTCATAATAACAAAAATTGCATCAAAAAGTAAAAAAAAAATTGTATTTA
ATGCTCTGCGTAACTAACAAAGCACTGCGTAATTGCGCATATTTATCAATATAATTTTAA
TCGGCATTATTTCAATCACAATAAAAATGACTTGAAAATTAACATGTCTCCAAAAATTTA
TCAATTGATATTAATAAATCAGCGAAAGCGCTATTGCCTTAAAGCCAAGTGCATGGAACA
TTGATAGGTTACAATAAGAAACCTTGAATTGTATAGTAAAATATTTTGATCTAATACATT
CTTCTTGCACATCTGAAAAACATTAAACATAGTCTCATACATGTAAAATTCAACATGCGA
GAAACACATAGCCAATCCATATTTACAAAGGTGACTCATGAAAGTTCATTCCATAGTCTT
GACTTTCAATTATTTTTTTCTTACATATTTGCATTACCAAATTGGGATATTTGTTTCTCA
TAATAATATGTTTTATTAAAACAAATCAATGTTCAATGTTCTAAAGCTTCTTCACTCACT
ATACTAATAGACATAAGCAACCTGTTCTTCCTTCTAATTCTAAATGTGCATGTAGATTCC
ACTTGCTACACCCTATTGTGTGTGAAAAAATAATATTAGATGTAATACTAAATGATATCG
GGATTTATTTATTTAATAATACATATTAATGATTATTAGTAAAGCACACTGGTTTTAATA
CAACAAAATATCATATTGGTAGTTTATTCATTTTAAGAGGAACTATTCCTTAAAAGTTCA
TTGTTTCTGCCGGAAGCATTTAAAATAAGAAATCCCGATATCATTACTAAAATGAAAAAA
AGTAATTTAACCCTATTATTATAACATGATTATTCTAACATGAAAAAAATATCTAGAGAC
CAAAATAGTATTTACTTATTAATAAAGATGAATAGTCTTATTTTAAGCCTAACATTGTGG
AACTTTAAGCAATATTATACTGCCTTACGTACCGAATCCCAAATAGAGATTATATAAATA
ACTATATTGATTACATTTTTATCCTGTTGTAAATATATAGATGATCATAATGATCATATT
TTTTCGAGGTGTAGTTTGTGAAATCATTGGCTCATGTCTTTCAAAGCTATTATTTAATCA
GAGTAATTCTATGCATATCCTTCTGTATATATTTATTTATTTATAATAGACACCTTCACT
AGATAAACAAATGAAGTACTTAACACATAGACCTAACTGAACAACGAACTTTACTAAAAT
AGATGAAAATATTGAATATATTGATAAAATACATTTTACGAGTATTGTTAACAAATCTTT
TGAAAGACATGAACCACAAATCATAGTTACCAAAAGTATAGCTATTTTTCACTTAAAATT
TTATAAACTATCACAACTCCTTGTTATCATTCACATAGTTTCTATAGTTGAAATTAATAG
ATGTACAACGTTATTTTTGTGAGCTTGAAATTGTCAATGTGCAGTTAGTCAATACCGGGT
GATGTTATTCCTTTACAAAAATAATGTATTCAAATTTTAAAATAATGTTCATATTTTACA
GTCACTGTTTATAGAAAGGTTAAATAAATTTAATAAATTATACCTTGGTTTCTACAATAC
GATCTTCAATTAAATTTGCGACTAGGTGAACATTTTTTAGAAGTCAAACCGAATGCTTAA
AGACAAAACTTAAAGATTATCTACATATTATTTGAAAATGATAAAAGATTATACAGCTTT
CTTGCTTTTAAAAATAACGTCGTATAGCTTCTCAGTCAGTCGAAGTATAATTTATTAGGT
GAGGTAGATATTCAAAATCTATTTCCACTAGTTCATCTTATTAAAGATGGAACGTGCAGC
GTGCAGGTTATAATGACAATATTTTATTGCGAATATTATAATGTTATATCATAGTTGCAG
TTTTCTATATACAATTTGTACTTATATTCAGATACATACAGTGACCATGCATCGTACGTT
AGTCTAAGACTTATCACTATAATCTGACCATGAATTAACTTCTAGAAAGTAAACAACTTG
CTATTTATACATTGTAGTTCGTACAAATGAAAATATCTATTCTAAAAATGTTAACTAATT
AATATTTTTATTATTTCAGAGAAAAATATATTTTATAATTTTTATTGCAATGACTTATCG
AATCTATAAATCTATCTTTTAGTGATCTATTTATTGATTTTTATTGATATATGATATGTG
TGTGCAGTGTATGTGTCGGAATGAAGGCTTTAGCGTCGTAGAATAAATGAATCGAAATTA
TCGGCTTAATGAGACAAGCCTAATAAATTGTAAGCACTATTTAGTCATAAGTATTTCTGT
TTAGTAGAGTATATCACTGTAGTTTTCACTATAAGAATTGCGGTCAATTGAGAATCAGTT
GGCAGTGATTGCTAAATTGATTCTAATTGTCTGTATGATTGCGATGAGGGCAGTGTCTAC
TGCGCAGGACTTGCATCACAAGGCACTAGTAGTACTAGTAGACTGATTAACATAGATACG
CGGATAGCCTGGCACAGTGGACACCTGCTTAATCACAGCGTAAAAAACTTAGTTTAATTA
TATTATTGTACTTAATAAATGTTTGATACGCACATATACATTTTCATAAGGAATCTCAAC
ATTTATAATTAATTACTAATAATTCAGTCGTTAGAAGTGGTAGCTATTTGCAAGTCTTGT
TAAATGTATATTCTCGTTTTAGTATTTTCCGAGATGACCCTTGTTCGAGGTGCTATCTTT
TGTGTAACTATATTCTAAAGAGGTGTTCTTTACGCTGTGATTGCATTACAAGCGGAACCA
ATACTAGATTTATGAGAACAGATATCTTATTATTTTATAAGTAGGAAAAGTATTATAATT
ACTATGCATTTAATTTTGAGATTTATTTTTCTTGTTTTAAACTGTCTAGCTGATAGCAAA
TAGTTAATAAAAAGTAGTTTTGTAATGAACCTTCATTCCCTTGTGCTGCGGTATAACTAG
TTTGTAATTCTAGTTGTTAATAATAATGTACAATAAAACACCCTCTCTGCCTTAGTGAAG
CTATTCTTACCCTTAATGCTAAGAACGAAATATCGATTAGTATCAAATTATACCTTGTAA
ATACGAATTCTTATGCTGGTGTAATATATCAAGCACTATGGAAAACTTTAATTCCTAACA
ATGGTCCAAACTTCAATCGCTTTTTTATTTATTCTATACAATTATACATTTTCTACGTAG
ATAAAGAAATAATTATTATATAATTTAGTATATAGATATTATGCTTTAAATTTATTTTAT
AGTTGTAAAACATGTATTTGTCGAAATGCTTAATTTTCATAAACAATTTTTTTAATGACA
AATGTCGATACCAAATGCAGTATTTTATTTTATATTCTACATTCTTTGTACCCGG
(5455 bp)

- SilkBase 1999-2023 -