SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13627c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_NFX1-type_zinc_finger-containing_protein_1-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.61 TPM:0.60
ORF EntryO_TrvaFAMAMG16764_complete:A_TrvaFAMAMG_TR13627c0_g1_i2
Sequence
(Nucleotide)
ATCGCTACGAATAGACTGGTTCGATGGCACAGTAATAGAAGAGGCCAGGTCATCAGGTAG
ATCTTCACAATTTGCTGACGAAGAAGAACAACCTCAAGAAGTGAAAAAGCCTGCATACAC
TGAAAAGAAACCTATTGGTTTTAAAAGGCTGCTTGATATATCATTATTGAAACCACCCAT
TTTAACCCTAGAAGTCTCACATAGACCAGGTTTTTGGAATCTCTTAGACGAAGAAGAATT
AAAAGGAGACTTTATAGTTTTAATCGTGAGAGTGCTAGCAAGTATTTACACGTCTCTGAA
AAGAGGTGAAAACGGCAAAATAGTGACGATGCTCCGAACTAGATTTCAAAATTCGAAGTT
TTTATCTAATTTAAAAAACTACATCGCGGACTTGCCAGCTGTTCGGATCGTAGAAAAGAG
GTTCAATACTCAAATGTGGGATGACGCAGAGGGGTTCTATTTTCAAATGGTTGAATTTTG
CGAGGGAATCATCAATTTTGGCGGGAACAGTGAAGATTTTCTACAAATTATTTTTGAATT
GTTGGAAGCTACTGAAGTGAGTGCATTGGGAGTTATAGAAGAACATTCAGAGAGATTTAG
CAATGAACTATTTGATAGGATTGAGCAATTGAAAATAAGATTTGCAGAAGAAATGAGTTC
TGAGGACAAAACACAAACCGTAAATCTTATAAGAAAAACCGATGATCCAAACAGCTTTAG
AAACTTGAACATATTCCCGACTCGACAAGATCTACTCTCAAATAATGTTGAATTAAAACC
TAATATTATTAACGGAGCATATCTAAATGTAGAGCATTACTTAGACATCCAATTTAAGTT
ATTAAGAGAAGATTACTTTGGTCCTCTAAGAGATGGAATAAGTGAGTATGTGTATTACCT
ACACTGCATTTTTTAGTTCATTCCTATATCGCTTATTCCTTATAATTTATTGCGTTCGTA
AATTAGCTTCATAATACATATTTCAGGTAGATATATGGAAAATCCTTCTAAAAGAAAACA
TGAGAATATCAGAGTCCATCCAAAAGTTCGTATAATCCGTAATTATGTGACAAATAACAA
AGTAGGCTATCTAGTGGATATAGCTTGGAAGGAACGCTATGAAAATTCAACAAAAATAAA
AGAAATTCGTAACAAACAGTTGATGTTTGGTTCACTATTATTGTTTACGAGTGATAATTT
TGAGACCATATTATGTGCTACTGTACTAGATTCTAGTTATAGTTTATTAAATTCAGGCTA
CGTGGTTGTAGCATTCCAAAATCCAGTATCTAATAAAATATTCTCTGAACCTTACTTAAT
GGTCGAGAGTGAAGTGTTTTTCGAACCCTACCATAGAGTTCTTAAAGTTCTACAGAATTC
AAGATCTGATGCACTTCCTATGAAAAAATACATTGTGGATATTGAGACCAAAAACCATCC
ACCAGCATACTTAAACTCCGAAACAATGTACACTATTAAAGAACCAGGAAACTCCGAAGA
AATATCTTTTCCAGTACTACAAAACGAATGGCCAGAACAATCAATAGGCCTTGACAAATC
TCAATTAGAAGCCTACAAATTCGCTCTAACAAGAGAATTTGCCGTCATCCAAGGACCACC
TGGTACTGGAAAAACGCATATAGGGATCAAAATTGCTTCAACTTTACTCACAAATTTGTC
CCTAGAAGGCACACCAATGTTAATAATTTGCTACACGAATCACGCCCTTGATCAATTCTT
AGAAGGACTATTGAGTGTCACCACAAATATAATAAGACTGGGGAGCCAAAGTAAAAGTAA
AAAATTAGAATCATATAATCTACATAACGCTAGAATGAAAATAAAATCGAAGTATTCGTA
CTTATATGCAACTAAGAGAGCAGAAATCGAAAAGATTTACAAAGAAATGTGTGATATACA
GGGTGATATTGAAGTATGTGAAAAAGAAATAATTTCGTACAAATGTATAAAGCCGTATAT
TAAAATTGATGGTCAAAACTACGAATTAAAATCGTCCAAAGAAGATGCAGTACTAAATTG
GTTGTTTGATGGAAATGATTTTGAAACGGATATTGATGATTGGGAGAATTTAGACGATTC
TTGTGATATAGAAAGTGTGTTTTCAGAAGAATTTGTGTCTAAAGAAATAGAATCAATGAG
AAATAGTATTAAATATGTTAATGATATTACTGAGGATATTAATGAAAAAAATGCAATGGT
TGATAAGTTTAAAGCACAAATTGATAAAGTTCAATTAAGATTGAACTGTTTTAAGAAATA
TAGATCTCTATACCAAGGCGATAATAAACCAAAATCGACCATAGACAAAATTGAAGATCT
GTACGATTTGAATTTGGAACAGAGATGGCAATTATACTATGAAGCTGTTGGATGCTTGAA
GAACGATTTATTGAGTAAAATGAATACACTTTTAGATAAACACAAGACCCTGAACGAAGA
GTTAGATCAAGTGACAACCTTGACGGACGCTGACGTCATGAAGTACGTGAGAGTGGTGGG
AGTCACCACCACTACAGCGGCTCGGAGACACGACCTACTTACCACGCTCAGACAATCTAT
AGTGATAGTCGAAGAAGCGGCCGAAGTATTAGAAGCTCACATCGTCGCGTCATTAACAAA
TGATTGTCAACATCTTATATTGATAGGCGATCACAAACAATTACGTCCTACAGCATCAAA
TTACATACTAGCCAAGAAATATAACCTAGAAATATCACTGTTCGAGCGCATGATAAGGAA
TGGCATACACGCGCGGACGCTCGCAGTACAACGACGAATGAGGCCTAATATTGTTGAGTT
GTTGGTTCCCAGTGTGTATGCAGCTTTAGAATCTCATGCTGATGTGTGTAATTACCCTAA
TGTTAAGGGCATGAAGAATGATTTGTATTTTTTAAAGCATGATGTGCTTGAAGATAGTGA
GGGCTTAGAAGAAAGCTGGAGTCACAAGAACAAGTTCGAAGCTAATTTCTGCGTCGCTTT
AGCTAATTATTTACGACAAATGAAATACACTGCTGATGAAATAACTATATTGTCTACTTA
TATGGAACAAGTCACATTAATTCGACAGTTAAGCAACGAATACGATTTACTGCGAGATAT
AAAGATAACTGCCGTAGACAATTTCCAAGGGGAAGACAGCAGGATAGTTATATTGTCTCT
GGTTAGGAGTAACAAGGACGGCAAGATTGGATTTCTGAACGCTACCAATAGGATTTGTGT
AGCTTTATCTAGGGCTAAAGAAGGTTTTTACATATTTGGAAACATGAATCTGTTGAAATC
TGTCAACAGTATATGGAATTCCATAGACAAGAAATTAACAGAACAAAACGCTATCGGTGA
CAAATTGACATTGATTTGTGATAATCATGGGACTAGTATGGAAATCAGACATCCGGACGA
CTTTGAAAATTGTACAACAGGATCGTGCCTAAAAACGTGTAGAATTAAATAAAAACACAT
TGTTGTGAATATTTTTTTATTGTGCAATCTTTTAAATAAATAATTATTCTATTTACAAAC
TAGTTTTTTTGTGATGTTATTTCATTGTTTTTGTCAAATGAACTGAATCATTTTATGATT
ACAGTTCCATAAGACACTGTCGATTTTTTTTTAATAATAAGCAAGTTTAAAACATCTATT
CTTTAGTTTTTTTGACGTGACAACGTCTTATAAATTGGTTTGGGGGTTCTGTGACACTTC
ACTTCACTGCG
(3731 bp)

- SilkBase 1999-2023 -