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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13583c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_Cytoskeletal_protein_Sojo_[Danaus_plexippus]
Ontology
GO:0000416 P positive regulation of histone H3-K36 methylation
GO:0001570 P vasculogenesis
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010212 P response to ionizing radiation
GO:0016363 C nuclear matrix
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0031398 P positive regulation of protein ubiquitination
GO:0035066 P positive regulation of histone acetylation
GO:0035097 C histone methyltransferase complex
GO:0043542 P endothelial cell migration
GO:0044666 C MLL3/4 complex
GO:0045830 P positive regulation of isotype switching
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
GO:0060612 P adipose tissue development
GO:0060717 P chorion development
Transcript
Level		FPKM:3.03 TPM:2.97
ORF EntryO_TrvaFAMAMG16529_5prime_partial:A_TrvaFAMAMG_TR13583c0_g1_i1
Sequence
(Nucleotide)
GAAAATATTGCGCGTTTTTAAAAGATATTGTTACTAAAAGTGTGTATAATGTGTGGTTAT
TTCTAAAGATATATAAAATCAGAATGGAATGCACACAGAAATTAGAATGTACCCAGGACC
TGTACAGGACTCAAAGGGAACACATTCAACCCGAACAGGTTGGATTCCTAGGTATAAACA
GCATGAAATATCCAGTATTGAAGGGTCCAAATAAAATCGGAAGGGATCCATCTTGCAGTA
TTGTTATCAATCAGAATTGTATCTCCAGACATCATGCTGTAATAAACGTGTTGAATCAGA
ACAGCTTCATGATAATGGACCTAGATTCAACTTCTAGAACTAAAGTATATGGAAAAACTC
TCCAGCCCTACATTCCACAACCACTTCAAAATGGCGACATACTACAGTTTGGGAATGTGA
TTGGTATATTCAGACTGTTAGAGGAGGAAGATGACTTGCCGATGACACAGGCTGTCGATG
TTCCCGATACTCCGATACAGCCGAAATTTATATCCAAAACAAACAGCGGTCATACAATTA
TACCGGAGTCCCCTGATGTTAGTGATAAAGAGGATTCATTTATAAAAGCATCACAACCTA
GGCATAAACAATTCAAAAACGATAATGTACATTTTGTGAAATCATCAAAGAACACAATCG
CAATTCAACCAATCGGTTCCAATAAAATTGACAATGTTTACTGGAATTCATCAAGAAAAT
CTGAATCTTTACATCTGTCTATGAACGATTCCACCACAGGGCAACCAAGCACAACAAATA
GTTCTAAAAACGACACTCACATTACTGACATACATGAAATGGACACACAACCAGCCCTTC
CGAATTCAAATAAAAGTATCGATTCTATACACCCTGCAGAAACACAACAGATTAATAAAG
AAAATCATGATCCCGATTCTATATTTAGTATGAACACACAACTCCCAATAAACGCGGAAA
GATTACCAGTTTCAACGCAAGTTGGCAAAAGTTTGAACCAAGGCGATGTCCAACTCAATT
TATACGCGTCCCACAACGAAAATGATGATAGCATATTCGAAGCTGCCACACAATTTATTG
CCAATGAAAATCCACAACCCACTGATAAAACCAAAGAAACTAATAATAACAAAGCAAAAG
ATGATTTAAATAGATCTAATATTGAGCTGGAATTTGAGGATATTGATAACGAACTTTTAG
ATGAGTGCTTCGAATCACAATCTCTTATACCGACCGAAGATATACAGGTTATATCTAAAT
CGGTACCTAAGGTTTCCAGCAATGTTAGTAATATGTCTAAATCGGTAAATTCTTCACACA
CTGATAAACCACAATCAAAGTCCTCATTGGCTGAAAATAATGATGATTCAACTGACTGTG
AAGATGATGACGATATAATAAGACCAAATAGATCAAAATCACCTATCATAAATAGTCCAA
CCATTGAGAAAAAATCTAAGCCCACAAATAATTCTCTAAACAAATCTTCAAAAAACAATG
ACATTTGTTTTGAAGAAATGCTGACACAAGTCATAGGAGAAGAAGATGAAATTCTCACAC
AAGTTATAGAAATTAATGAAGAAGTTCCCAAAATTGAGGTTACGAATAATGATGATATTG
AAGACTTACCAACACAAGTCATTATAGAAATTGATGAAAACAAAGACACAAGAAAAAGTA
CAATTGAACAGTATTCCGAAGAAGTCGTCAGCCCCTTTAAAATGCCATTGCGTTTCAAGA
AAAAACCGCAACTCGCATCGCCTAAGCCAACAGTCGAGAAAAAGGAAGTTATCAATGAAA
ATAATGATAAATATTATCAATCGACGCAAGAAGTTATAAACGATCTATGTTCCCAAAACA
AAGATACTTCCCCTGTACATAAAAGTAAGAAAGATATATCAAAAAACAAAGGTTTACTCG
CTGAATCGCCAGGAAGTAGCGAAAGTGAAGAAAAAGTAAATCAGTTTGTGACTAGTTTAT
CAAAGAGTCAAATAAATAATATGATAGGAGTAGATTCTGCAGATATCTTAAATAAATCTA
CAGATTCTTCAGATTTTGATTGCACTCCTAAAAAAGTGAAACCACTCGATATTATGGACG
TCGAATTACCAAATACACAAGAGATAAAAGAAAGTCTAAGTAAATATCCAAATCAAAATA
CAGATGATTTGTCTACAGATTCTGAGGTTGAAAATGTTGTAGAAGAACTATGTGATCCAT
TTTTATTGAAAAAGAAGAAACAGAAAGTAGAAAATACGAGAAAGAACTTAAATGAGAAAT
TTGAAGAATTATCTACTAAATCAAAGCGAACTCGTAAACCAGCTGCTAAATTACAAGATT
GTTGCGAAAATCATGAATCAAATCAAATTAAAATAGACAAACAAAGTCCCGAAACAAAGA
ACAATAGAGATAAAAAATCCAAAAGTGATTCAAGTAAAAATTCTAAACAAGACAAAACGA
AGATTAGCAAAAACGAAAAGAAAGACAGAAAAGACACGTCAAACACAAAATTAAATTTAA
GTGAGCAATCTAGAAGCAAAGAAAAATCTACCGATAAGTCAAATAAATCTCCAACGAAAT
CTACAAATACCTCGCGTGATACAAAACGAAGCAAAGTAATTGAATTAGAAATTGAAGATA
ATAGTAGAACAACACGCAATAGTAGAAGTAAAACTAAAGCCACCAAATCCGAGAAAACCA
CTGAAAAAGACGAAACCGTAAGAAAATCAAAAAGAAATGACATCAAAAATGAAAAGCGAG
ATGTATCAAATTCTTCGACAGAAAGAAGCAAACACTCTGACATAAGTAAAGAGAGAAATT
CTTTTAAAATACCAATCGCACCCGAAGAAAGTAGATCGACTAGAAGTAGAAAAAAAGAAA
AAGAAAAACCAGACAACATAATCGATATCACAAACGATACTCACGATGAATCCGATGTCA
AAGTGCGGCGAAGTAAACGACAAACAAACAAAACAAACGAAAGTACTCAATTAAAATCGA
TATTAAAAAAATCGAATGATCAGAGTATTGTTTACAATGAATCGATATCTTCAAACGAAG
AGGTGAGAGTTTCCAAAAGGCCAGCCATTACATACAGTAATGGGCCTAGTTCGAAAAGAA
GTAAAGTGGATGTTAACTCCAGTGTAAATTTAAGGCCGACTCCATCTAGAAATGTGAAGA
CCCAATACGTTCTGTTCACTGCCTTTGCAAACGATGAGGTCAAAGCTAAATTGGAGAACT
TAGGTGCTGTAATAGTTACCGATATATACAAGTGTACGGTTGTGTTGACGCATCAGATCA
AACGAACGTTCAAACTGTTGTGCGTGGTCGGGCTGGGGCGGCCCATCGTCGGACCGAACT
GGGTCCAAGCTTGTGCCGATAATAACACGATCGTTGATCCCTGGTTATATTTATTAAAAG
ATGAGACAGCAGAGAAAAGGTTCAGTTTCAGTCTACACAGGACACTGACGGGCAGAAGGA
ACTTCTTGAAAGGATATAATGTGTTTTCAACACCGAGTGTCATGCCCAGCGCTTCTGAGA
TGAAAATGATAGTCGAATGTTCTGGAGGTACTTGGAAGGAAGGCGGTCGCAATTGGATTT
GCGTCTCGTCCATGGCGGACAAACATCTCTGGTCGTCGATCAAAAAACGCGGCGCCATCT
TGGTTTCAACGGAATTCATTCTTCAAGGAGTCTTGCAACAAAAAGTTAATATTGAAGGGA
CTGCGTTACCCGTCGACTAGTTTTAGTGTTATACAAAGAATTCCAGATGAAACATATAAT
AATATGTGTAAGGTATATTTTCCAGATGTTTAACTAATTACCTGTGGATGATAAATGTCA
CATAGAAACTACAGGCTCAGTACCGGCAAGTTGCAACTTGGAACTATACTAGCCATGTTG
AATTTCAATTGGGGTCAATTAAATCATGGAGTTTTTTTTTTTATTGCCATGGCAGACGAG
CCAACGGGCCACCTGATCGTAAGTGGTTACCGTC
(3994 bp)

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