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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13571c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:8.51 TPM:8.34
ORF EntryO_TrvaFAMAMG16462_5prime_partial:A_TrvaFAMAMG_TR13571c0_g1_i3
Sequence
(Nucleotide)
TTTTTTTTTTTTAAGCTTTGAAAATGTAATATTTTATTTGTAAACTCGAACAATTAAGTA
ATTAATTACCGTAAATATACGTGAAGTTATTAAACAATTCTATATTTTCTACAAAAATAG
TATGTATCGTCGTTAATGAGTGAGTGTCTTTAAGAGATATGTTACCGCTCCGTGCTGCTC
CTACACTCTGTACTGTAATGCTACTGCTGGTACAACGACTATATCTATTGTATTGTTCTG
GTCTCGATCAGGCACCTCAATAATTATAATACTAATTTACTAACTAAAATGTAAAATTCT
AACGTCGAAATTCGTTTAATAATAATATCATCTTTAGTTACATATCTATCTAATTCGTGA
TAAAACTGACAAGAAACAAGGCTTCTCATTTTAATCATAACTCTAACATGTTACAAGCTA
TGTTTAAGCGTTTGAATGTGTCCCAGTGTTGCGACCCGGTGCGACCCGGCCCGATCCGGC
GCGAGCGACCGTCGGCCGATACAACACAATATACTTACAGCTATATTCATAGGAAACGTA
ATTTACCTCTTGAATACTTTAGTTATTAATCAGCACATATTACGATCACACAACCATTTA
TTATTAATAAATATAATTCACATCATCAGGTCTCATACAATGTTCTAAGAACATGAAATA
GTAAATAATATTTATACTAATAATGTAGACGAAACATTTGTAAAGCGTTAATAAGAATGA
GCGGTTACGACGCGGGCTCGGCGCGACCACGGCGCGGCCTCGGCGCGACCACGGCGCGGC
CTCGGCGCGGGCTCGGCGCGGCCACGGTATACGACAGATCAAACACAGTGCAGTCCTTCT
GTAAACTATTGGATGCCCCGACGTCCCTCGTACAGTATCTGTCTCCGCAGAACACTACAC
CTACCTATCATTAACGTAGTGTGGAGGTCGAATAAAGCGTTATCATTCTTTACAAAATAA
TCTTATCTAATATATTTTCCATCTCTTAACTTGGTTTATATTCTTCAAAGCTAAAGACAA
ACAGGGTATTGAATTCGCTTAGTGGAAGTCGTCCGTCGTCTCCTACAGACAAGCAGTAGG
TACTCTACTAATAACTAAAACACACGTGATTCATTTAGATTTTAGACTCATCATCATAAA
AATTTCAACACGTAGCAATACTAAAAGAGTTTTCTTTACATTATTATCAAAAATTTGATT
TGATATTTAATATTTTGGAACATACGGTTTTAGTCCGTCGCAGGTCCTATACACAGGGTG
AATGTTTGAAAACTATTCATTGTGGCCATACTCCAAACTGAACCTAATAAATTCGTCACA
AAACGAATAGTTTCGAATCAATTAATCGAGATCATGTGACAGTTTTATCCTAACTTAAAT
ATTTATTTTTCAATCAAACTTGCTGTTCGTTATCAAAAATAATATATTATGATTTTGCTA
CTTATAAATTGAGTTATTTAGATCTCAGAGAGTTTAAATCTTTATTTATATTTATTATTT
TGTTGCTAGTGTCTATACGTCGTAGATCTTACATTATAGTACCTACTCTAATTTGTACTT
CTCAATGGATGCCAATTAAGCTACGGTACTTTAGTGTGCCAGAACATGATATTGTATTGT
CACAAACACAAACAGCGGGAGGCAGCCGGACACGTGTCAGAGGTCGACGTTGTTGAGCGC
GGCGCGCGCGGGGTCGGGCGGCGCCAGCAGCAGCGTGCCGACGGGACACACGGCGGCGTC
GCGCGCCCTCAGAGCCTGCATCTCGGCGCGCAGCTTGTCCAGCACGGCGTAGTTGGGCTC
GTTGTGCCGCGCCTTGTCCTGCAGCAGCGTGATCTGCTGCTCCTCCAGCTTCTTCTCCTT
GCAGCTCTTCACGGACTGCGAGCCGTACAGCCGCAGCAGCGAGCCCCACGACCGCACGTG
CGGGTGCAGCGCCTGCAGGATGGCCTGCGACGCTCGTTGCTTGGCGCTCTTCTTGTTCTT
GCAGACGACGGTGGCGGTGTGCTTGCCCACCTTCATTGTCAACTCGACCTTCTGGTTCTC
AAACTTCTTCATCTCGGTGTGCACGTGTCGGTCGCCGACGCCGAAGTTGCGCAGGAGACA
GGTGCGCAGGATGGCGTGCGGCGAGGGCTCGCAGGTGGCGGCGCAGAACTCGGCGACGCG
CGGGTCCTCGATGGTGATGTAGTCGAAGAAGGTGAAGTCGGGGTCGGAGTGCCGGCGCGT
GCCGTCCAGCTCGTCGCGCATCTCCGGGATGAGGATGTGTATGGAGGCGCGCGCCGCCGC
AGACTTGGCCTGTCGCTTGCTGGAGCCGCGCCCCACGCCGTACTGCATGCCGCCGATGTA
CACCGTCGCCTGGTACGGCGTGGCCGCGTTCTCGAGCTGCTTGAACTCGTAGATGGGTTG
TTTCTGCAGCGCGCGGCCGACGTACTCGTGGAAGACGGCGAGGTAGCTGCGTCCGTCCAT
GTTCATGACCCAGTCGCGCTTGGCTCCCTTGCCCCCCGCTTGGTTGTCGTGGTTGTTGGC
GGGGATGGCGATGAGCTTGGTGCCCTCGGGCAGGCGCGGGTACTGCAGCGGCTTGCGCGC
CTTCGTGTACTTGTGGCGGTCCGCCCAGCGCTTGAACAACATGATGTTTACAGTTTTGAA
TTTGAACAGTTTCTTGCAGTAGTCGTTGAGTTGTTGGTGCGTGAGGTGCTGCGTCTTCCA
GCTGGAGCTGAGCGACTGCACGCGCGGCGGCGGCATCACCTGGCCGCCGGGCAACACCAC
GGGCCGGCGCGGACACACGCCGCTACCGCCGGCCGCCGAGCCCGCCGCCGC
(2811 bp)

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