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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13562c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_supporter_of_activation_of_yellow_protein_[Bombyx_mori]
Ontology
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0070604 C RSC-type complex
Transcript
Level		FPKM:6.22 TPM:6.09
ORF EntryO_TrvaFAMAMG16373_3prime_partial:A_TrvaFAMAMG_TR13562c0_g1_i1
Sequence
(Nucleotide)
CCCGCCGCCGCCCCGCCCGCCGCGCCGCCCGGCTCCCGCGCGCCGCACGACTTGCACACG
GCGCACTCTACGCAGTGCCACCGACCAGTAGGCACTTCAGGCAGGCCGACGCAGTAGGAA
TGGAAGCCTCTGTCGCATAGATCGCAGAAGAGCATCTTGTCGTCGTCGGCGGGTCGCGCG
CACTGCCCGCACGTCTTGCACTCGGCGCACTGCCACGCGTACTCGCGACACTTGCGGATC
GTGTCCGCACCCAGCTCCACGCAGCCCGGGTGGAGTTTAGCATTGCAAGTAGCGCAGACA
AGGAACCGTTCGTGCGTGTGTTTCCTGTTCCCTTCGAGCCGCAGCTTGCAGGTGCGACAC
GTGTCTTCAGCTTCCGCCGACTCACTTTCCTTTTCTTTTTCCTTCTCCTTCTCCGCTTGA
CTGCTGCGTTTTACTTTACTCACTCTCTTACGCTTAGCCTGTTGTGTGTGTGAATCAGAG
TTGACACTGGAGTCGGAGGCTGAGCCCGAGTCTTGTTCCGACTCGGAGCTACAGTCCGGA
GTGACGGCGGGCGGAGGCGCTGCCAACACTGTGTTCAGCGGGAAGTACCTGAGCTGTTCG
GGCGTGTAGATCCTGTACGCGTGCTGGTACTGTCCGGGCAGCAGGGCGTGCGGGTAGAAG
CCGGGCGGCGGGCGCACGTGGATGGCGGGTCGGTGCGCGGGCGCTCGTCGCCTGTGCACG
GTCATGCTCTGCAGGTCGACGCACGCGACGCTGCGTGTTGCGTTGATGCGCGCGTTCCAC
TCGCTCGCAGACGCTATGGCAGCCGCCGCCATGTCCTGTCTTAATTTTTCTGGATCTATT
TTAGGTATATCCGGTTTGTGATCAGAAGATTTTTCAGATTTAAATTCCATTTTAATGGAT
TTTTCCTCCATCTTAATTTCAGTGGCAACTTCTTGAGGTTCAGTAAGTTGCCTTTGACGT
TGATGCGTCCGATATTCCTCATATTTGTGTGGGTAGTCTGATAACATGATATCTAGAACT
TCACTTGCATCCACTGCTGTGATACCTAAGTCACAGAGAGCTTCAGTGACCAATCCCTTA
GCTAGTACAAAATCCTTTTCGTCGCCTACGATTGGTCTCCGCTTGAGTTCCGGATATCTT
CGTTTAAAGCTCTTCACGCCAAGGAACATTGCCACCTGTTCTTGTATCATCATTACCTGT
GGTTCACCTTCACCGCGTCCTAGTGGAGGCCACATGTACTCCTTCACATCAGCTGCTGTC
CACTGCTTATTACTGTCAAACAAGTCTGCAAATTTCGATTTTTTAAATTTGCTACTCTCG
TTTGTTAAACTTTTCACAGAGCTTTGTGAATCTTCATCAATGAGATGCGACGGTTTAGCA
GGGGTAGCATTGTCATCCATCATGCAGGTTTCTTCTTCAAAAAGTTGCACTGTGGTCGTC
GCGGGGCCGCAAACACGACCATAAATACCCATGGTCTCCTTCATGTAGACGGCACCGCGA
CCTCCGCCCCGGCCTCGAGGCCGCGAGCGTGGCGTGCGACCGCGCGGCGTGCGGCCCCCG
CGCGAGCCTCGGCCCCGGCCCGGCGTGCTCTCCCGCAGCGGGATGTCGTCGAGGGGAACC
GGCTCCAGCACCACCTTGGGCTCAGGCTCCGGCGTCCCGCGCCGTCGACTCGACAGCGGG
GTGGCACAGCCTCCCGGCATGCGGTCCAGAGCCTCGGTGAGTCGAGGGAGCTTCACTCGT
GAGCTGGTTGGGTCTATGTCCTCGGGAGGATCTTCAGGGGGTGAGGGCGGCGGTGGCTCG
ACCTCAGATCGCCGACCGCCCCGCCCGCGACCTCGCCCTCCTCGTGGTTTCGCTACTATC
GCAGGCCTCTCTCTCGTCAACCGAAGCGATCGTTGCGGTCGTTCTTCTAGCGCCGTTACC
GGGAGGATGACCGGTTTGGCCCCCTCTGAAGTGGGCAGTTTTCGCGGCCGCCCTCGTTTT
TTCGGTTGCGGTGTAAATTCTTCTGGTCTTATTATACTAGTCTCATTCATGAGATCCTCT
GATATTTTAGAAGTGTCGACTTCTAGAGGATCTTGTGACATGTCATCGGCACCCATGCTG
TTATCTCGAAAATCTGAATTTTCGTTGATTATCATCTCCTGAACTTTGGGATGACAGTTT
TCACTTACTGATTCAGTTGCGTCCAAACTTCCCGTTGATGGTTCGGAAACTACATCGGCA
TTCGTTATTGCAGATTGGATTGCATTATTACTATCAAGTAAAGATATTGACTTCATTTGC
TTTGCTTGTAAATTTGAAAGGATATTATGTAATTTAGAATTTCCATTTTTAGAACAATTT
TCATTATTGAGTATTGAGTGATTGACAGATCTTGTAGGCTGTTTAATATCTAAACCTTTT
GTCGGAGAAGTCGACGTTGGTTTGGAAGCAACAGGTGTTATGGTTAAAGATTTGTTGCTT
GTCAAAAGCTGTTCTAACTTTAGTCGTTTAGTATCTAATATAGACATTTCAGCATTTTTC
ACTTCTGGGGGACTTGATTCTGATGTAGAAGGTCTTTTCACTGTATTTCTTTTTACAACA
GGTGTCTTATCAACACTTTCAACGACTCTTGAACTTCGTAATCTTTTGCCTGCTGCCAAA
GGTGGTGATTCAAGGTTATGCTGTTTTCTCTTGCTATTTACAGTATATCTTTTAGGACTT
TCTTTTTCATTAATTGCTTCTTGAACATTTTCTATAAAATTCTTTTGAGGAGAATCAGGT
CTCTTTGTCTCTTCAGTGATTATTTTTGCTGAAGGACCTTGATCAGTCTTATTTATTTTC
AAAATTATTCTTGGTGAATCTTGACCAGAACTTTGAGTTCCTACTTTATCTGAGATGCTT
ATTTCTAGTGGCTTACTTATGTGTTCAGCACCCCTTCCAATCTTTCATCATTAGTCTCTT
AATTGGTGACTTGTATGAAAGATTGGAA
(2968 bp)

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