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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13552c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_homeobox_protein_cut_isoform_X6_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007469 P antennal development
GO:0007605 P sensory perception of sound
GO:0008052 P sensory organ boundary specification
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048098 P antennal joint development
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0060288 P formation of a compartment boundary
GO:0061332 P Malpighian tubule bud morphogenesis
GO:0070983 P dendrite guidance
Transcript
Level		FPKM:7.73 TPM:7.57
ORF EntryO_TrvaFAMAMG16338_3prime_partial:A_TrvaFAMAMG_TR13552c0_g2_i2
Sequence
(Nucleotide)
CGGTCATCTTAGCCGTCGAGTGGCGTCCCACTGGGCGGGGCCGCGTCAAGGAGCGAGCCT
CAGATGCGCGCAGAGCCGTCGCCCGGTGGGGTCCGCTGCCAAGGATCGCACTGCAGTCGT
GTGTCGCGGCTACGACGGGCGCTCGCGGCCACGTCGCGATCACATCCCTTACGTAACAAC
TACCGCGCGCGATCACAACTATACACAACATAATCGATTACAGAACTATTCATTATCGAT
TATTTTATTGAGTGCGTGACGAATTATTGTTTTGTTTTTGGACTTGAGATTGTTTGATCT
GACTGTGTTAGTAAAGTGCCGTGCAACGGGATCAATCTTAATTCTGTGATTTGTTTTTGA
CTAAGTGGTTGTGGACTTTGAAAATTTTACTGTGTTTGTGACTGCAACGAACTTGCAAAC
ACGCGATCTCGAATCGATTAAAATCGATATTATTGCGATGGTCCGGCGATGGTGTGGTCA
GTGAGGGCGGCGATGAGGCGGTGACAGCGGCCGGATGCACCCGACCGGCGGAGGCCTGCC
CGCCGCACCAGAGGCGGAGGTGCAAGCTATGCACTCGATGGACTGGCTCTTCAAGAAAGA
GAGGATATACCTACTAGCGCAGTTTTGGCAACAGAGAGCCACACTGGCCGAAAAAGAAGT
GACCACCCTCAAAGAGCAACTGGCAACGACCAGCCCCACGCCACTCCAAGCCAACATCCC
ACCAAAGACCAATGGCTCCCACTTAGACAGGGAACCCATGGACACCAGGATAGACCGCTA
CAGCCCAGATATCAAGGAAGAGAAGAGGCATTCCCCTGAGATTGATGAGGATCTAGACAA
GATGGAAATGGCTGCGACTGCGAGGAGTAATAGTAACTCGTCGAGGAGTAGTCCCATCGT
GCAGGGAGGGAGTCTGGAGACGGAACTAGCAGCCAAAGAGAAAGAGATCGCTCAACTAGT
AGAAGACGTAAGAAGACTGCAGGCATCTTTGTCAGCGCTGCAGGAAGCCCACGCCCAGCA
GCTGCAGAGGCTGGAGGAGCGCCTGGATGAGAAGAAGCAGCACATAGCGAGGCTGGAGGC
CAGGCTCGACAACCAGAGGGACTACGATGATATCAAGCGAGAGATTAGTATGCTCAGGTC
GCTGGACCTGGGTTCAGGCGAGCGGTCGTGCGACAGATCGTTAGAGCGTAAGTCGGACTC
GCTTCGGTCGCCGAGCACAGTGCCCGTCCGCGACGACAGACTCTCCGTCGAGCGAGAGAG
GAGCACCGAGCGACGAGACACCGTAGGAACAAAAGATGGTACTCCAGGACCTGGCTTCGG
CAGATCAGAAGGAGAAGGCGATGACCGTCTCGCTCACATGCTCAATGAAGCCTCGCATCT
TATGAAGACTCCAACAGGTCACCCTAATAACGATGACTCTAGAAGTAATGAAGACTCGAG
TTCACCTAGAACACAGTGCCTCTCACCCTTCTCAAATAAGGATTCCAGTCAAAATAGAAG
ACTTAAAAAGTATGAAAATGATGACATTCCGCCTGATAAAGTGGTACGCATCTACCACGA
GGAACTTGCAAAGATCATGACGAGGAGGGTAGAGGACATGCGGCATAATCGAGACGGCTT
CCCTGGCGGAGGGATGGCACCCCACATGGAGCGGCCGCCCGAAGACATCCGCATGGCGCT
GGAGGCCTACCACCGCGAGCTGGCCAAGCTGCAGCCCGGCGCGGCGCTCCACGGCCTGCC
CGGCGTGCCGCCCTTCCCCAACCTGCTGGCGCTGCAGCAGCAGGCCATGCAGCAGCACGT
CAACGGCGCGCCCGCCATCCAGGACCTCTCGCTGCCCAAAGACAAGTCCATCAAGATGAA
TGGAATGACTGATAGCGATAAGGACAAGCCGCTGGACGCCGAGGAGGCCCTCCGGCACGC
GGGCAGCGCCTTCTCGCTGGTGCGGCCCAAGCTGGAGCCCGGCCAGCAGTCCACGGGCTC
GTCGGCCTCCAGCCCGCTCGGCAACGCCATCCTGCCGCCCGCCATCACCCCCGGCGACGA
CTACGCCGCGTCGGCCGCCGCCAGCCCGCTGCAGCGCATGGCCTCCATCACCAACTCGCT
GATCTCGCAGCCCTCCAACCCGCCGCACCACCCGCCGCCGCAGCGCTCCATGAAGGCCGT
GCTGCCGCCCATCACGCAGCAGCAGTTCGACCTCTTCAACAACCTCAACACCGAGGACAT
CGTGAGGCGAGTCAAGGAAGCGCTCAGTCAGTACTCCATCAGTCAGCGGCTGTTCGGGGA
GTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCAGCGACCTGCTGGCGAGGCCCAAGCCCTG
GCACATGCTCACGCAGAAGGGACGGGAACCCTTCATCAGGATGAAGATGTTCCTGGAGGA
CGACAACGCGGTGCACAAGCTGGTCGCGTCGCAGTACAAGATCGCACCCGAGAAACTGAT
GAGGACAGGAAACTACAGCGGAGCACCTCCTTGTCCGCCGAACATGAACAAGCCGATGCC
TCCAACACAGAAGATGATCTCAGACGCGACCTCCCTCCTCAGCAAGATGCAGCAGGAGCA
GCTCCTGGGCGGCGCACACCTGGCGCACCTCGCGCAGCCCGCCCCGCTGCTCCTCACGCC
CCCCGGCTACCCCCCCGCGCACGCCGTGACGCTGCCCCCGCACCCCCACGACAACAACAA
CAAGGAGCGCAAGGGGCCGCCCCCGCCCCCGCACCACCAGCCGCCCGTGCTGCGCTCCGT
GCACCAGCACATGACGCCCAGCGTCTACGAGATGGCGGCGCTCACGCAGGACCTGGACAC
GCAGACCATCACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATCGGGCAGAAGAT
CTTCGGCGAGGCGGTGCTGGGCCTCTCGCAGGGCTCCGTCAGCGAGCTGCTCTCCAAGCC
CAAACCCTGGCACATGCTCAGCATCAAGGGCAGGGAGCCCTTCATCCGCATGCAGCTGTG
GCTCAGCGACGCGCACAACATCGACCGGCTCCAGGCGCTCAAGAACGAGCGGCGCGAGGC
CAACAAGCGGCGCCGCTCCTCCGGGCCCGGACAGGACAACTCCTCCGACACCTCCTCCAA
CGACACCTCCGAGTTCTACCACTCCAGCTCGCCCGGACCCAACTCCGGCGGAGCGCCCTG
CGCCAAGAAACAGAGGGTCTTGTTCTCAGAAGAACAGAAAGAAGCGCTAAGGCTGGCGTT
CGCGCTCGACCCCTACCCCAACATGCCCACCATAGAGTTCCTCGCCGCGGAGCTCGGGCT
CTCCACGCGTACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTCAAGCAGCAGGC
GCCGCACGGCCTGCCCTCGGAGCCCCCCGCCCGCGAGCAGTCCTCCGCGCCCTTCGACCC
CGTCCAGTTCCGGCTGCTCCTCAACCAGCGCCTGCTGGAGCTGCAGAAGGAGCGCATGGG
GCTGGCGGGCGTGCCGCTGCCCTACTCGCCGTACTTCGCCAACTCCAACCTGGCGGCGCT
GATCGGGCGCGGCCTCATCGGGCCCGAGGAGGGCAAGGAGTCCATCGGCGGGCTGGACCT
CACCATGCCGCTCAAGCGGGAGCCCGACGGAGACGAGTTCGAAGACGACGACGTCGAGAG
CAACCTCGGCTCCGAGGACTCGCTCGACGACGAATCTAAGACTGAACCGAAGGCGTCCTC
CACCCCCCAGGGCCGCTCCAGCAGACGGAAGCCCGCCGCGCCGCAGTGGGTCAACCCGCA
CTGGCAGGACGACAAGCCGCGCAACCCCGACGAGGTCATCATCAACGGCGTGTGCGTCAT
GCGCGCCGGCGACGACTTCCGGCGCGACAGCGAGGAGACCGTGCGCGTGGAGCCCGCCCC
CGCCGCCCCCGCGTCCGCCCCCGCCTCCGGCCTGCCCTCCCACCGCGACCTCGACGACGT
CAAGAACATCAAGAAGTGGGTGCGGCAAGGCACGGAGCTGTTCAACAGCAAGCCGGAGCG
CGGCATCGAGTTCCTGCAGGAGCACGGCGTCCTCGCCACGCCGCTCGACCCGCACCAGGT
CGCCGTCTTCCTCCGCGAGAACCCCGACCTCGACAAGAAGATGATCGGCGAGTACATCTG
CAAGCGGTCGTCGCGCGGCGAGCTCGTGCTGAGCGCCTTCGCCGACAGCTTCCAGTTCGC
GGGGCTGCGCATCGACAGCGCGCTGCGGCTCTACCTCGAGACCTTCCGCCTGCCCGGGGA
GGCGCCGCTCATCTTCCTGCTCATGGAGAAGTTCGCCGAGCGCTGGCACACCAGCAACGG
ATGTCCGTTCGCGAATCCTGACGCGGCGTTCCGGCTGGCGTACGCGATCATCATGCTGAA
CATGGACCAGCACAATCACAACGCCAAGAAGCTGAACGTGCCGATGACCGTCGAGGACTT
CGTCAAGAACCTGCGCGGCTGCAACGGATCCGGCGACTTCGAGCAGGCCATGCTGGAGCA
GGTGTACCACTCCATCAAGAACGAGGAGATGGTGATGCCGGCGGAGCGCGTGGGGCCGGT
GCGCGACGCCTACCTGTGGCGCGTGCTGCAGCGCCGCCCCGCCCACTACCGCGCGCTGTG
CCCGGCGCTGCACGCCGCTGCGCCCGCCGCCCGCCGCGCCGCCCCCCACCCCTACCACGA
TAAACTGTTTGCGTTGCTCTGCCCTCCTATTGTGGCGGCGCTCTCTGCTGCGTTCGAGCG
CGCGCCGGCCCCCAGCGCGGAGGAGGCGCGCGCGGCGGCGGGGACGGGGGCGGGGGCGG
(4799 bp)

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