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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13552c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_homeobox_protein_cut_isoform_X6_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007469 P antennal development
GO:0007605 P sensory perception of sound
GO:0008052 P sensory organ boundary specification
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048098 P antennal joint development
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0060288 P formation of a compartment boundary
GO:0061332 P Malpighian tubule bud morphogenesis
GO:0070983 P dendrite guidance
Transcript
Level		FPKM:5.40 TPM:5.29
ORF EntryO_TrvaFAMAMG16333_3prime_partial:A_TrvaFAMAMG_TR13552c0_g2_i1
Sequence
(Nucleotide)
CGGTCATCTTAGCCGTCGAGTGGCGTCCCACTGGGCGGGGCCGCGTCAAGGAGCGAGCCT
CAGATGCGCGCAGAGCCGTCGCCCGGTGGGGTCCGCTGCCAAGGATCGCACTGCAGTCGT
GTGTCGCGGCTACGACGGGCGCTCGCGGCCACGTCGCGATCACATCCCTTACGTAACAAC
TACCGCGCGCGATCACAACTATACACAACATAATCGATTACAGAACTATTCATTATCGAT
TATTTTATTGAGTGCGTGACGAATTATTGTTTTGTTTTTGGACTTGAGATTGTTTGATCT
GACTGTGTTAGTAAAGTGCCGTGCAACGGGATCAATCTTAATTCTGTGATTTGTTTTTGA
CTAAGTGGTTGTGGACTTTGAAAATTTTACTGTGTTTGTGACTGCAACGAACTTGCAAAC
ACGCGATCTCGAATCGATTAAAATCGATATTATTGCGATGGTCCGGCGATGGTGTGGTCA
GTGAGGGCGGCGATGAGGCGGTGACAGCGGCCGGATGCACCCGACCGGCGGAGGCCTGCC
CGCCGCACCAGAGGCGGAGGTGCAAGCTATGCACTCGATGGACTGGCTCTTCAAGAAAGA
GAGGATATACCTACTAGCGCAGTTTTGGCAACAGAGAGCCACACTGGCCGAAAAAGAAGT
GACCACCCTCAAAGAGCAACTGGCAACGACCAGCCCCACGCCACTCCAAGCCAACATCCC
ACCAAAGACCAATGGCTCCCACTTAGACAGGGAACCCATGGACACCAGGATAGACCGCTA
CAGCCCAGATATCAAGGAAGAGAAGAGGCATTCCCCTGAGATTGATGAGGATCTAGACAA
GATGGAAATGGCTGCGACTGCGAGGAGTAATAGTAACTCGTCGAGGAGTAGTCCCATCGT
GCAGGGAGGGAGTCTGGAGACGGAACTAGCAGCCAAAGAGAAAGAGATCGCTCAACTAGT
AGAAGACGTAAGAAGACTGCAGGCATCTTTGTCAGCGCTGCAGGAAGCCCACGCCCAGCA
GCTGCAGAGGCTGGAGGAGCGCCTGGATGAGAAGAAGCAGCACATAGCGAGGCTGGAGGC
CAGGCTCGACAACCAGAGGGACTACGATGATATCAAGCGAGAGATTAGTATGCTCAGGTC
GCTGGACCTGGGTTCAGGCGAGCGGTCGTGCGACAGATCGTTAGAGCGTAAGTCGGACTC
GCTTCGGTCGCCGAGCACAGTGCCCGTCCGCGACGACAGACTCTCCGTCGAGCGAGAGAG
GAGCACCGAGCGACGAGACACCGTAGGAACAAAAGATGGTACTCCAGGACCTGGCTTCGG
CAGATCAGAAGGAGAAGGCGATGACCGTCTCGCTCACATGCTCAATGAAGCCTCGCATCT
TATGAAGACTCCAACAGGTCACCCTAATAACGATGACTCTAGAAGTAATGAAGACTCGAG
TTCACCTAGAACACAGTGCCTCTCACCCTTCTCAAATAAGGATTCCAGTCAAAATAGAAG
ACTTAAAAAGTATGAAAATGATGACATTCCGCCTGATAAAGTGGTACGCATCTACCACGA
GGAACTTGCAAAGATCATGACGAGGAGGGTAGAGGACATGCGGCATAATCGAGACGGCTT
CCCTGGCATGCTTCCGCCTTTTTTTCAGCGGAGGGATGGCACCCCACATGGAGCGGCCGC
CCGAAGACATCCGCATGGCGCTGGAGGCCTACCACCGCGAGCTGGCCAAGCTGCAGCCCG
GCGCGGCGCTCCACGGCCTGCCCGGCGTGCCGCCCTTCCCCAACCTGCTGGCGCTGCAGC
AGCAGGCCATGCAGCAGCACGTCAACGGCGCGCCCGCCATCCAGGACCTCTCGCTGCCCA
AAGACAAGTCCATCAAGATGAATGGAATGACTGATAGCGATAAGGACAAGCCGCTGGACG
CCGAGGAGGCCCTCCGGCACGCGGGCAGCGCCTTCTCGCTGGTGCGGCCCAAGCTGGAGC
CCGGCCAGCAGTCCACGGGCTCGTCGGCCTCCAGCCCGCTCGGCAACGCCATCCTGCCGC
CCGCCATCACCCCCGGCGACGACTACGCCGCGTCGGCCGCCGCCAGCCCGCTGCAGCGCA
TGGCCTCCATCACCAACTCGCTGATCTCGCAGCCCTCCAACCCGCCGCACCACCCGCCGC
CGCAGCGCTCCATGAAGGCCGTGCTGCCGCCCATCACGCAGCAGCAGTTCGACCTCTTCA
ACAACCTCAACACCGAGGACATCGTGAGGCGAGTCAAGGAAGCGCTCAGTCAGTACTCCA
TCAGTCAGCGGCTGTTCGGGGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCAGCGACC
TGCTGGCGAGGCCCAAGCCCTGGCACATGCTCACGCAGAAGGGACGGGAACCCTTCATCA
GGATGAAGATGTTCCTGGAGGACGACAACGCGGTGCACAAGCTGGTCGCGTCGCAGTACA
AGATCGCACCCGAGAAACTGATGAGGACAGGAAACTACAGCGGAGCACCTCCTTGTCCGC
CGAACATGAACAAGCCGATGCCTCCAACACAGAAGATGATCTCAGACGCGACCTCCCTCC
TCAGCAAGATGCAGCAGGAGCAGCTCCTGGGCGGCGCACACCTGGCGCACCTCGCGCAGC
CCGCCCCGCTGCTCCTCACGCCCCCCGGCTACCCCCCCGCGCACGCCGTGACGCTGCCCC
CGCACCCCCACGACAACAACAACAAGGAGCGCAAGGGGCCGCCCCCGCCCCCGCACCACC
AGCCGCCCGTGCTGCGCTCCGTGCACCAGCACATGACGCCCAGCGTCTACGAGATGGCGG
CGCTCACGCAGGACCTGGACACGCAGACCATCACCACCAAGATCAAGGAGGCGCTGCTCG
CCAACAACATCGGGCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTCTCGCAGGGCTCCG
TCAGCGAGCTGCTCTCCAAGCCCAAACCCTGGCACATGCTCAGCATCAAGGGCAGGGAGC
CCTTCATCCGCATGCAGCTGTGGCTCAGCGACGCGCACAACATCGACCGGCTCCAGGCGC
TCAAGAACGAGCGGCGCGAGGCCAACAAGCGGCGCCGCTCCTCCGGGCCCGGACAGGACA
ACTCCTCCGACACCTCCTCCAACGACACCTCCGAGTTCTACCACTCCAGCTCGCCCGGAC
CCAACTCCGGCGGAGCGCCCTGCGCCAAGAAACAGAGGGTCTTGTTCTCAGAAGAACAGA
AAGAAGCGCTAAGGCTGGCGTTCGCGCTCGACCCCTACCCCAACATGCCCACCATAGAGT
TCCTCGCCGCGGAGCTCGGGCTCTCCACGCGTACCATCACCAACTGGTTCCACAACCACC
GCATGCGGCTCAAGCAGCAGGCGCCGCACGGCCTGCCCTCGGAGCCCCCCGCCCGCGAGC
AGTCCTCCGCGCCCTTCGACCCCGTCCAGTTCCGGCTGCTCCTCAACCAGCGCCTGCTGG
AGCTGCAGAAGGAGCGCATGGGGCTGGCGGGCGTGCCGCTGCCCTACTCGCCGTACTTCG
CCAACTCCAACCTGGCGGCGCTGATCGGGCGCGGCCTCATCGGGCCCGAGGAGGGCAAGG
AGTCCATCGGCGGGCTGGACCTCACCATGCCGCTCAAGCGGGAGCCCGACGGAGACGAGT
TCGAAGACGACGACGTCGAGAGCAACCTCGGCTCCGAGGACTCGCTCGACGACGAATCTA
AGACTGAACCGAAGGCGTCCTCCACCCCCCAGGGCCGCTCCAGCAGACGGAAGCCCGCCG
CGCCGCAGTGGGTCAACCCGCACTGGCAGGACGACAAGCCGCGCAACCCCGACGAGGTCA
TCATCAACGGCGTGTGCGTCATGCGCGCCGGCGACGACTTCCGGCGCGACAGCGAGGAGA
CCGTGCGCGTGGAGCCCGCCCCCGCCGCCCCCGCGTCCGCCCCCGCCTCCGGCCTGCCCT
CCCACCGCGACCTCGACGACGTCAAGAACATCAAGAAGTGGGTGCGGCAAGGCACGGAGC
TGTTCAACAGCAAGCCGGAGCGCGGCATCGAGTTCCTGCAGGAGCACGGCGTCCTCGCCA
CGCCGCTCGACCCGCACCAGGTCGCCGTCTTCCTCCGCGAGAACCCCGACCTCGACAAGA
AGATGATCGGCGAGTACATCTGCAAGCGGTCGTCGCGCGGCGAGCTCGTGCTGAGCGCCT
TCGCCGACAGCTTCCAGTTCGCGGGGCTGCGCATCGACAGCGCGCTGCGGCTCTACCTCG
AGACCTTCCGCCTGCCCGGGGAGGCGCCGCTCATCTTCCTGCTCATGGAGAAGTTCGCCG
AGCGCTGGCACACCAGCAACGGATGTCCGTTCGCGAATCCTGACGCGGCGTTCCGGCTGG
CGTACGCGATCATCATGCTGAACATGGACCAGCACAATCACAACGCCAAGAAGCTGAACG
TGCCGATGACCGTCGAGGACTTCGTCAAGAACCTGCGCGGCTGCAACGGATCCGGCGACT
TCGAGCAGGCCATGCTGGAGCAGGTGTACCACTCCATCAAGAACGAGGAGATGGTGATGC
CGGCGGAGCGCGTGGGGCCGGTGCGCGACGCCTACCTGTGGCGCGTGCTGCAGCGCCGCC
CCGCCCACTACCGCGCGCTGTGCCCGGCGCTGCACGCCGCTGCGCCCGCCGCCCGCCGCG
CCGCCCCCCACCCCTACCACGATAAACTGTTTGCGTTGCTCTGCCCTCCTATTGTGGCGG
CGCTCTCTGCTGCGTTCGAGCGCGCGCCGGCCCCCAGCGCGGAGGAGGCGCGCGCGGCGG
CGGGGACGGGGGCGGGGGCGG
(4821 bp)

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