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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13326c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_20880_[Danaus_plexippus]
Ontology
GO:0000790 C chromatin
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005829 C cytosol
GO:0006383 P transcription by RNA polymerase III
GO:0032481 P positive regulation of type I interferon production
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
Transcript
Level		FPKM:3.62 TPM:3.55
ORF EntryO_TrvaFAMAMG16114_complete:A_TrvaFAMAMG_TR13326c0_g2_i1
Sequence
(Nucleotide)
AAATTTTATTTCATAAATATCACAATAGTCTCCAAAGCTGTGAAATAGTGTTAATTATCA
CTAATGTCGGCTGATAAACCCTCAAAACCCAACGGGTTAGGTACAGATCCTATGCAGCGA
CTACCATCGCTGAAGGCCCCTCGGGATCTCTTGCTCGGTGGTGTAAAACCTAACAAAAAG
ATATTCACTCCAAATTTAAACGTAACCAGAAGTAAAAATAAAGGTCAAGCAACAACAAGT
TCCAAAGAATCAAAACATGAAGAAAGAAACAGAGAACACAGAAACAAGAACTTCAACAAG
AATCACAGAAATGGACCGTCTCTCATTAAATCAGCTGGAGTGTTCTCAGAAGGTATGGGA
GCATCAGAGCGAAATACTTCGAGTCGCTACTATTTACGAGATAGTGACAAATCTGCAAAC
ACTATGAAGAAACCTACTATCAGAGTCAAGGATTTTGTTAAGATTGATAAAGAATTAGAA
GAAGCCAAGATAAATTCTATTCTGAAAGGCGATACTGATGATCTTGAAGTGATTGATTTT
AAAGATGTTTTGGACAGAGATGCTCCAATTAAATTGCCCATGGACGATGGAAGTTGGGCG
AAAACACAAATGAAACCTAAAATTAAGGTCAAAGAAGAGATTATTGTTAAGACTGAACCA
CAAGATGAAACTGACTGCGATGTAATGACACAAGAATCAAAACCGGACGTCAAAGAAGTA
TTTGAAGACACAGATTTAGTAAATCTACTGAAGAATGACAAACCAACATTAATGTTGCTG
CAGCTTCCGGACAGTTTGCCTGGCAGAGGAGGTCGTATCGAAGACGATGTTCCTCGACGG
AAGAAACAAAACGAACCTGGAACTTCAAGTGGGGCCACCAGCACCCCTGGCAGCGATACT
GAAGAAAAACAGGAGGAGGATAATAAATGTCGTTTGAAAGATCTCGAGGAAGGAAAGATC
GGTAAACTACAGCTGCACAGATCTGGAAGGGTCACGCTGGCTTTAGGTGAAACTGTATTT
GAGGTATCAATGGGTACAAAAGCCGCATTCCACCAAGAGCTGGTATCCGTGACCACTGAC
GATACCTCCCGTTCAGCCAAGATCACATCACTAGGGGCTTTGCGACATAAACTAAACGTC
ATACCGGATTGGGAAACTATGTTTAGGGATATACCTTTGTAGAAATAATAAGAGTAAATG
AATAGAATTCAAGGAGGAAGGTTTCTTTCAGTGTCCCCTAACATTGCAAAGGTCCATGAG
CGGTGGTAACTTATGATAAGACGGCCCGTAGGCTCGTCTAAATTTTGTTTGTATAAAGAT
TTTCGTGCTATTTATCACAACACTACTGGATATAAACAGTGTGGGTACCTACAGTGGACT
TATGGCCAAAGGGAGATCTCGTTGCGGGCGAGCTAGTG
(1418 bp)

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