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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13065c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101742598_isoform_X2_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001764 P neuron migration
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0010629 P negative regulation of gene expression
GO:0021610 P facial nerve morphogenesis
GO:0021785 P branchiomotor neuron axon guidance
GO:0022008 P neurogenesis
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
Transcript
Level		FPKM:8.99 TPM:8.81
ORF EntryO_TrvaFAMAMG15939_complete:A_TrvaFAMAMG_TR13065c0_g1_i1
Sequence
(Nucleotide)
GTGTAATATAGGTTATAGAAAAATAAAATCAATTCTGTTACAACAAATGTGTAAATAAAT
TTTATGACAATGGACTCAAGAAAAGAATCTTTAAGTACTCTAAAAATTTGTAGGTTTTGT
CTTTCTCAAGATGAATCCGAACTTACAAGTTTGTATGACAAAATTCGAGCGCCAAAAAAT
GCTGTTACGTTCCAACTTAAAATATTATCCTGTATCGCAGTTGAGGTGTTCCCTTCAGAT
AAAATGCCTTCATATATTTGTCTCCGCTGTAAGTTCTTCATGGACATCACTTATGAATTT
AAAAGAATCTGTAGGACGGCCGATGAGAACATGCTACAGTTTATTCAGAATGGAACACAA
TTAGAACCTTTGATCTGGCCACCTTCTTTGAAAAAGATTTTCCAGTTGAGAAGTAAAGGT
AAAGTTCCTGCTGAAGTAAATCTCATGAAAACTGTAGTAGAGGGTGGTGCAACCGTACAG
GTTACTACTCAAGACCTATCTGACACAGACATGGAGGATGATGAAAATGTTTATAATATT
AAGATTGGAGATGGTCCTGATCATGATAATAGTAGTACCCGTATCAAAGTTGTTACTACT
GATGTCCCCAGAGAGAAAACCAAAGCAAACAAAGGATTCTCATCGGTGACCAAACTGACG
AGGCATGTACGTACTCATGCCGGACAAAGATCCTATCCCTGCAAATTCTGTAACAAGAGT
TTTGTGAAAACTCATCATTATACTAGACATCTCCGTACGAAGCACGCTGGCGAGTACTCG
TGTCGTGACGCAGACGATCAGTTCCGCTGTGAACAGTGCGACGACACGTTCGGCTCGCAG
GACGACCTCATCTACCACTCCGCCATACACGCCACGCAGAACCTCATCTGTCCGCTTTGT
CAGGAGAAGTTCGATGATGTGGATGGCGTCACTGCACATATCAAATCGCATGGAACAGGA
GTAGAATACATGTGCGACTACTGTGAATTGATATTCACCGAGAAGGAAAAACTTGATTTC
CATGTGGCTTCAGTGCATGACAAAGATGAGGACATTGGTCTGGACGAGTCGTCGATGGAG
ATGGACGAGGAGTTGGAAGAAGAGGAAGAGGATGATAATACTATTAATTTAAAAGAAGAA
AATGGCGAAATGGTTGTTGAAATAAATAAAGCCGATGATTTCATGTTGGAAAATAAAGAA
GATCAAGAAAAATCAGAGTTAGTTGACAACACGAATTTAGAAGATGTTACAGTGTCAGAA
GAGAATGGTGAAGTGGTTGTGGAAATCAAGAAAACTGAAGAATTTGTTCTAAATCAAGAT
AAAGCAGTAGCAACCGAAAACATCAATACGGAAGAATCTGACAATGAGGCGACCACAGTC
GCAGAAATTCCGGAAAAAGAAGATGTAGTCAATGAGAAGCCGCCCACATCACCTCCCATA
CCTACAGAAGTAATAAAACCGCGCTCACAACCAACTGATAAAACTGAAAGTCAAACAGCC
AGTATACTTCGTAAGGCCGAAGAGGTCAAAAGAAAAGCACAGCTGAAAACATCAGACCCT
CCTGCAGAGAAGAAACAGAAACCAAATAACAATAATAAAGTAGAAAGTAGCACGCCAGTC
GGCGCTAGTGATAAGTCATTACGTCTTCTAGAAAAAGAATTGCAAGATCTGAAACGGACG
AATACAAGATCGGATGCAGTAAAAACTCCGATAAAATCGCTGGAGACATCAAGGAGCAGG
CGGGCACCAATACACACTTCAACCCCTAAACCAAGGTCGATTGAAGAAAGGAAATCTCAA
TTAGCACAGTCGAAATTAAACCTAATAGAAAAGAAGAACCAGGAAAAACGAGCATTGACA
AAAGAAAACAAAGAACCAAAGGAACTGAAAGAAAGCAAAGAGACAAAAAATACTTCAAAT
GTTAAAGATGAAAAAGAAAGTAAAGATATCAGTAAGGATAATAAGGTGGTGTCCAAAAAT
GGAACAAGTGAGAAACGTGAGGAAGGCCCGGTCAGGCGCTCAGCTAGACCGTCCAAAATT
AGAGACTACGCTAAGATGATTCGCGATAGTTCTCAAACTTCGGACGGTTCTAATGAGGGT
TCGGACAAAGAAGAAGAGGATGATGGTACTGAAAGTGAATCCAAAGAAACTGACAAAACC
CCTGAGACTCGCACCAAGCAGCGCAGAACTAGTGTTAGATCGGCCGCCGCCGCCCGCAAA
CAAACTCCTCCTCCCGCTGAACCATCCACACCGACCGCCAGGAAACGGGGAAGGCCACGT
AAAGATACTAAAGTGCCCTCTAAAATAAAAAAGCAAGAAGAAGAAGAAATCAAGACTGAG
GAGGTTAAATCGAATAAATCTCAGGAAACCAAAAATGAATCAGTAAAAGCCAAAAATACA
TCAAAAGTAAGTGAAAGTAACAAGGATGATAAAATTTCTTCAGAAAATAATGAAGACAAT
AAATCGGATCAGACAGATGATGAATCAAGCAAACAGAGTTCTAATGAAAATTCTCAAGCT
GGTGTTGTTGTATCACCTACAACAGGACAAACCTTGAAGAAGGTACCAATCAAAGCATTA
CCACCAGGAGTTAAACCTCTACCACTTCCTACAACCCCCAGACTTGGCAGCGGTGAAGTA
TGCGAGATGCAAATAGGAAAGAAAATAGTTAAGGTACAAAAAATAGTAATGACCAAAGCT
GAAGTAGAGGCGATGGCTAAGAAGGGACTTGTAGAAATGAAGGATGGTACTATGGTATTG
AAACAGGGAATAAAGATACCGACAGCAGATAGCTCATTGAAATCTCCAACTACAGAAGAG
TTGAGCAAAGAATCTCCAAAAAAAAGACAAAGTTACACCGACGAGGTTTGACATCGGCGA
CGATGCGCACAAAAAATAGACACTTTGATTTTATGCAATCAATGAAATGAATGAAATCTC
AAGTTTTTTGAGCAAAATTGATTCTGAAATAATATCATGAAGTGTTTTCACAAGTTTTAT
TATACCACATTATGTATTAAAAATTATGTTCATCAAGTATTTCTGTATTACAAATTAAGA
TTTTATTTCATTATGATTTGAC
(3082 bp)

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