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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR13019c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
Transcript
Level		FPKM:10.72 TPM:10.51
ORF EntryO_TrvaFAMAMG15790_internal:A_TrvaFAMAMG_TR13019c0_g2_i1
Sequence
(Nucleotide)
GGCAGGCCCCCCTCGCCCCCGCCTGCCTCGAGTGCCTCCTCTGCTTCCTCTTCCGCCTCT
ACTGCCGCGCCCTCTCGCGGGACGAGAGTTAGCGCTCATTTGGGCATTAAGATGATTCTG
TAGTTCTTCCGCCTTGGCCTTAGCCACGTGGTCAGGCAGCTTCTCTATGGGCACGATGGC
CGTCTTCTGCATGAGCTCGTCCAGCGCCCTCTGCTTGCGACCCTCGTCCGCGGAGTCCGA
CGACAGCTCCGAGTCCTCCAGCTTGAACTCGTCCGAGCTGTCTGGCATATGCTTGCCGCT
TGATTTGTGCATTTCCTCCTCGGACTCGGTGTTGGGCATCTCGGTGTAGTCGATCTTCCT
GTGCCGTGTGCGCGGCGCGGGCGCGTCGTGGTGGTGCTCGTCGCCGGACAGTCCGCCGTA
CGTGACGCGTCTGTTCGCGTTCGGTTCGTGTTCGCGGTGAGATCGCTTCTTCTTCTTGCC
GCTTTTAGAACGATCGCGACGCTTGTGATGTTTGATTTTTAATTTTTTCTTAGCTTCCCA
TTCTTTATTCTCGGCGGACTCACTGGAGCTGTCCGTGAATACGCCTTTCTTTTTCTTTTT
CACTTCTGGAGAGGACTCGGCCATTTTGGGACGATCTTTCTTATCGATTCTACCGGTCCT
CCTGATGGGAAGCGAGTCTGAGGATCGTGAATCACTGGAATCTCTCTCAGCTGACGATGA
TATTTCTTCAGAAGATGATACCATACCGGTATCTTTGAAGTCTTCATCAGTTTCATCGTC
ATCCTCGGAAGGGACGTCCAGTGAATTCAATTTCCTTGGTTTCCGTCGTTGTTTTCTTTT
TGTTTTCTTTAATTCCAACGGTTTACCCTGTTCCATGGCCTCTCGTTCGGCCTTCATTTT
CTCTTCCTCGGCGGCCTCTATGATGGTGGATATGTCCTTGCCGCGACCTTGATTACCGGC
ACTTGTTGTTGGCTCAACATATTCCTCCTTGATGGCGGTGGAGATGAGTCTGTCGTACTC
CTGGCTGCGGTAGGAGACGGGCAGCTGTCGCCGAGCGCGCAGCCGGTACACAGCACCCGA
TGATGATGATGACCAGCTGCTGCTGCTTTCTTCAGAATCTGTGTCATCTTCTTGTTTTTC
ACTCTTCTTCTCCGGTTCTTTAGCCTGTTCCGCTTCCGCGTCCGCCTGCGCCTTCTCTTT
CATCTCCGCTGTTTTCCTGGCCCGCTCCTCTTCGACCTTCACCACTAGCTCATCGTATTT
CACTAATTCTTGTTCCAATGATTCTATTAGTTTCTCATGGTTGCACCGCGGACAGTACCA
GTCCCCCTCCGGCACGAGGAACAGCATCGGCTTGAGACAGCTGGCGTGGTAGCCGTGGTC
GCAGCGGTCGCACAGCAGGATCCACTCGGGCTGCTCTCCGCTACCACAACGCTTGCAGAA
ACCTTCGTCTACGCCTTTACCCTCTTGCAGTGTTCGAGCCCTTTTCGTTGGTTCGACTGG
TTCTCCCGTCTCCAAGTCAGATTCAGGTGAAAATTCATGGTCAGACTTGTCAAAGTTCAA
GTCGGGTTCCTCGTGCGGATGTTCAAAGAGCGGTTCGTCGGAGTCTGTGTCGGGGCTGTC
CTCGTCGCTGTGCGAGCCGGACCAGCGTCGCGCGCGCCCGCTGCTCGCCTCGCCCTCGCT
TCCCACCCACTCTTCGTCGTCGTCCTTAGTCTTCTTGTGTATGAGTTTAAGTTCTCTAAG
TGCGACTTCCTCCTGATGTCTCCTCTCAGCTTCCTCCTTGATCTTCTGTTGCGCGATCCT
CCGCGACTGTCGCACCGGGGTCGCGTCGTCATCGTCCGAAGCAACACGAGCCTTGGACTT
TAACCCCTTCTTGTCTTTCACTTTGGACTTCTTTTTAACTGGTTTCCGAGGCGATTTCTT
GCCGGCTAAGCTGTACAGTGTTTCTTCTTCTGAATCATCACTAGAACGTTTTTCCATCAG
TTTCGCTTCTACTTTCTTTCTTGTAGATTTGATGATCTTCTTAGGTTTAGTTTTCAATCG
TTTTCCGCTAACAACAGGCAAGTCTTCATCACTATCACTCTGAGATTCAGTTTTATCTTT
ATCACTAATAGGAGTGTCCAAAAGAGACCTTTTCAGTGATTTATTTTTCTTTTCACTAAC
CTTGTTATCATCTGTTTTATTTACACTATTTACTTTCGCCTTCTTTTTAAATCTACCTTT
AACAGCTTTGATTTTCTTTCTCTGATTTATATTTACACTGTCCTTATTTGAATTCTTATT
TACAGTATCGGATTCGTTTTCGTTGG
(2306 bp)

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