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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12653c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_KH_domain-containing,_RNA-binding,_signal_transduction-associated_protein_2-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008143 F poly(A) binding
GO:0008266 F poly(U) RNA binding
GO:0017124 F SH3 domain binding
GO:0042169 F SH2 domain binding
GO:0046982 F protein heterodimerization activity
Transcript
Level		FPKM:0.89 TPM:0.87
ORF EntryO_TrvaFAMAMG15702_complete:A_TrvaFAMAMG_TR12653c0_g1_i1
Sequence
(Nucleotide)
GGCGATTCGGTCGTCTTGTGAGTCCGACCCCGTATCTCGCGCAAGTGTATTAAATCGTGT
TTTTTTATAAAAATATACTTTAAATTAACAGTTTTCTGTAATCAGTGGTTGTCAAGATAT
TTTCGAGTGTATAAGGTAACCCCAAGTGTCAGTGTCAGTGAGAGTGTAATGTCAAAGTGA
CAGGTGACGTGTGACGTCAAACGTCATGGAGCCGACGCCGTTAACATTGGAAGACGAGGA
GCGTCCACCACAAGGATCTTCCACCGGAAGCGGATCCTCATCGGGAACTGGATACTATGG
ACATAAGAATGGTCTGACGACCCGCAGTGAAGAGATGCTAGGTGATTGGAGAGGTGACAG
AAGAATGCTGGACATCACACGAGATAAACCAGTGAAGGTTTGCGTACGAGTGGTCGTTCC
AGTTAGAGACCACCCTAAATTCAACTTCGTGGGAAAACTGTTGGGGCCAAAAGGAAACTC
TCTCAAGAGACTACAAGAAGACACAATGTGCAAAATGGCGGTGTTAGGCCGAGGATCTAT
GAAAGATAGACAGAAGGAAGAAGAATTAAGAGTATCTGGTGACCCGAAGTTCGCGCATCT
ATCTGATGAACTCCACGTCGAGATCAGTGCGTTTGCCACGCCTGCCGAAGCCCACGCCAG
GATCGCCTATGCTCTGGCAGAATTGAGACGATTCCTTGTGCCTGACTACAACGATGACAT
AAGACAAGAACAAATGCTAGAGATGCAGATCCTATCTTCGCAGAATGACCAGAGGCGTCT
CACTCCACCAGATTCTTCGCGAAGTGGCAGCGAAGAGACTTTGCCCTTAAGGGATCCTGC
TAACAAACCTAGGTTACCAACGGTTCAGCCAACACCGGCTCCAACAACACTACCAGGCAC
CATCGTGAACCACGCTCCTTCCACTCGTGACTTCTCACCGCCTGCTCCCACACCAGCGCC
GGAACATCTTGCTCATCATCAGTTGGCTGGTCACACAGGCCACGGAATGCTCGTAGGAGG
TGGAATGATACAGCAACCTCAGCACCACCTCATCACACAGAACTCCATACTCGGTGCAGG
CGACATCCTGGGCCTCAGCAGCCCCGTGCTCGGTGGCGTACTACACGCGCACCCAGCACT
CCGCGGGGTGAAGCCTGCAGCAGTCCACGCTTTAGCGACGCAAGGTGCGGCCGGGTCCGC
GGGGGCCAGCACCGCCCGCAAGCGTCCCCTGCTGGGCGGTACGCGGGCCGCGATGTCCCC
GACCAAGCGGGCCGTGATGACCCTGCTGGCAAGAGCTAGGGCTGCCACTCACAAGCACGC
CGCTACCTGGCCGACTGCCCACGAGCACACAGCTCTACTTCCCTTGATAAGGGATGATTT
CGTCGCCGGGGTGGGGGTGAACATTAATTTAGCTTAAAATAACAACGATATCTAGTCAAA
TTGTACTTTAATAACGTGTACATAAGGTGTGTTTTACAATGAATATCTACGATACAAAAA
AGTAAAGTTGTCATAAAATTATTTCGAGGTCTTAAAAGCCTCGTACTTAAATATTTTTTG
CTATAGACACGAAACAAATATTTTAATTTTAGACCGTTCGCTGCGAAACCAATTTTTGCA
TACTTACCGTTCGCTGCGACACGAGGTGTTATCAGCCTGCACCATGAC
(1668 bp)

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