SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12401c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030163 P protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:23.93 TPM:23.44
ORF EntryO_TrvaFAMAMG15583_complete:A_TrvaFAMAMG_TR12401c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTCAAAATAAATTAATTTATTATCACAAAAGCTTGCAT
TGCACCTTTTAGCATGTAATTCCAGAATACAAAAGCTTAAATTGTAAGCTCAGCTGGACA
TCAATCAACAGCTGATTTTTGGTTGCTAGAAATCATTGAATAATATTATCAGTCAATTAA
TCAGTTGCTACAAGAGCCATGACTGTGAAGCGTACTTCATTAGGATCACGAGCCATAAAT
CCTTTGCAAACTTTTGCTGCATCCTCTAACAAAGTTTCCTGCGAAGTTGGCCCATGATTC
ACAGGGAAAGCTTTACGTCCATCCAATTCATAGAGTGATCCATCCTTATGGACGAAGCTA
ATGAAATGATGATTTACAGGATCCTCAGCACTTGGCGTATTGGTTTGCCCTTCTTGAGCT
AACTCTTTATGAGCATTAATGATTCCTTCAAACTTTTCCAAGAGAGAGCCACGAGCTGCA
GCGTCCAGGCCCTTGGCTTCATTTAAAAAGTTTTTGATGTGTCCATCAGACAACTCAATA
ACGTCGGTATTATTGGCTACACTGTGCACCAGTGCTATGGTTCCACATGCATTGCTTATA
TTTTGCTTCATGTAGAAAACATTCCCAGTAACATTCTGTCCTTTAGACAGAATATCGTCT
TCCTCTGCCTTTTTGTGACTTTCGTAGGCATCCGAAATAGGGAATAGAAGCATTACGGAA
AGCACGGGGCGAGGAACCCACGAAAGCATTTCGGAATCTAATCCCATAACGTCGACAATA
TTCCATTTATTTGGTACTCCGAGCTTTTGCAAAAACTTATTGAGTACATCGGGATTGGAT
TCCAGAGGAATTAAAGTTTCAGTCGCCATTTCAGTAACGATTTTATGACTTCAAAATCAG
TGACTAACAATTGAATATGTTTAAAAATTAAAGATTCAGTACTTTCAGAATTCGTAAAAG
AATGAAAGTGGTGAACTTTCTCGTTTCAAAAATGAGTCGACAAAACAAAATTAAAAATCA
ATAATAGATACAGA
(1034 bp)

- SilkBase 1999-2023 -