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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12258c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:24.46 TPM:23.96
ORF EntryO_TrvaFAMAMG15545_internal:A_TrvaFAMAMG_TR12258c0_g1_i1
Sequence
(Nucleotide)
GGCGGCCGTACCGGCGGCGACCGTGGTGCCGTGCGAGCCCCGCCGCGGCCCGCGCGAACG
GCCCCCGCTGCCTATGAGCTTGCCCCTCCCGAAGTTCGCGGAACAGCTGCTGCGTTCGTG
CCCCCCGGCGCCGCGGCCACAGTTCGCGCCGGCCCCCGACTCGCCGCCGCGCCCTCCCTC
TGCGTCGTCGTCGAGCGGACCCTCCGCGCCGCACTCTCCCTCTTTGGAAGAACGCATCCG
CAGCCTTGACGAGAAGTATGAGAAGTGGAGCGGCTCGAGAGCCCTGGCCGATGCTCCGGA
GCGTGCTCGGTTTCGTCATCGACTCCTCGAAGTTGACATAAATGAAGTAAAACCTTCAGA
AGTGGTTCGTTCGTTGTTGGCAAAACGATCTGTTTTTGATGAAGATTCTGAACGCTTAGA
GAGCGTGGTGCGTGCTCCGAGTCCAATAATGAGTCCGCGTGCGCGCCCCCAGTGCGTCAC
TCCACGAACTTTACGATATCCTTATCCGACTCACGGGTTGAACTTCAATAATCCGTCTCA
TTTTTCGGTGACTTCTCACATTCCTTTACCACCTCTTCCCTCTCCGCCGGAAGTCGAGAC
AGACAGTGAACGCCCAGTGGACCCCCGCCTTGCTCGGTCGTCTGACAGACTTGTTCGTCC
AGATCGCTTGAACAAGATTAACGAAAGCGAATATAAATTGGACCTACGTCATCGGCCTAT
GACACCACCAATTGACAAACTACCCTCAGACTCAAGTGAAAATATTTTTTCAGAGGAAAC
GTCATGTTCGAACATAAGATTACCTTTAACACATAAATCTGATGAAAAGAAATCCTCAGA
AAAATATACAGAAGAAAACAAAGATTTAGGTTCAAATTACAAGTTAAACCTAGATTTTTT
GGAGAATGATCAGAAAATTCAAAGTGAAAATCCAGTCGAAAAAGAATCTTTTTCTCTGTG
CGCAAATATAGATATATCTGATATAAAACTGCCAGACGATCCTCCACCGTCTTCTTTTTC
TGAAGATAAAACAGCTCGAGATGTTATGGATATGATTTTGAAACAAATAGAACAACATCA
AGAATCACAGATATTAAAATTTTTGGAGACTAGTTCAGAAAAACTGTTTAAATGCAATTA
TCAAAAAGCAGAAGACCGAAGTATAGTCAAATTTAACCATAAAGACACTACAAATATAAT
TAAGCAGTCTTCAAATGATAGTGAAAAAAATACCGAAATACTTATTCCATACCACAATAA
AGACGTTATTGAAGATTCGCAAATAAAAACTAATCCTTGTGATAGTTTAAATAAATTACT
CTTTGAAAAAACAAGTAAAGAGAAAAATATTCATCGTGAAAAAGGAATTGAAAATGATAA
ATATATTTCAAATTTTAAATCACAATCTCACACAGAAAAAAAACTTGTTTGCGAAAAAAA
TTTTGAAGATCGCGGTAAAATTGATCGTGAAAAGTCAAAAAGTAAAGATCGTCAAGAAAA
GGACAAGTCTGAACATGAAAAGTCAAAAGTCCACAGACACGAAAAACAGGAAAAACACGA
CAAAGATAAAAAAATAAAAGATGCACTTGCAGAGAAAATAAACACCGATAAAATAGAGAG
AAAAGTTGATAAAGATCATGAAAAACATAAAGAGAAAAAAGATGATAACTCTTCAGAAAG
GCATTCTAAACATTTTGACGATAAATCTAAGCATGAACATTATAAGCGAGATAAATCTGA
AAGAGACAGGAGGAAAAATTCCACAGAAGAATGCTTATTTAAATCAAAACGTGACGAGAA
GCACAGGCATGAAAAATCTAAAAAAGACGGCGACTCCAAACGTGACACCAAAAAGGATTC
TGAAAGTAAAAGTCGTAAATCATCTAGGGATGAATCAACTCGAGAAGTGAGTCGAAAAGA
TTCTACAGATTCTTCAACCTCTAGAGCGTCACATGAATCAACTAGACACAAAGACTTAGA
AAATGAAACAAGAGAAGATTCTAAAGCTAAATCAAGACACAATGATCATGTCACGAAACA
TGACCGCGAAAAAGATTCGTGTCTTAAAACATGTGAACCAAAAACCGAAGTTCCAGTAAA
AACTAAAACTGAAGATAAAGATCATCATAAAACTTCTTCTGATCAACAAAGCAAAAATAA
ATCTGAGCAGACTGTTGATACTATAAAAAAAACTGATCACAGTGATAAACAAAGACATTA
TTCAGTGGATTCATCAAGTATAGACACGAAGAAGAAAGAACGTCAGAATTCATGTTCTAG
CTTACCATCCAATATCGGAAACAAAAGAAGAATGTCATCACAAGATAGCATTGATTCTGT
TCATGACGATATGAAAAAAATGAAAAGTGAATCGAAACATCCAGATCGAAGAGATTCAAA
GGACACTAAAAATGACAAACATAGGACACCTAAATTCAGTAAAGGTCATTTTGCTAAAAT
AATTGAGAGTAAAACAAAAGATGAAAAACGAAATCAAGTTAAACTACTTGATGGTTGCAA
TTCTGATTATAAAGAAAATGACGGTAAAGTTAGTAAGTTATGCGATCGTATAAAACCATT
TAAAAAAAGTCCGAAAGATGAAGAAGACTTATTTGCTGATAACAATAAACCAGATACGTT
AGAAAACGATTTAGATTTTTTGGCTACGTTACAATTAAGATCGAGTGAAGAAGATGAAAA
ACAGAAAGCTTTAAAAAGAGAGATGAAGGAAAAGAAACGATTACAACAATTGCAACAAAT
TCAACAACTACAGATGCAACAGGACGCTTTACAACAGTGTGAAATTTTAAACCAGTTAAA
AGATGACAAAAAATCTAAATACGATGAAAAGAAGAAAGACATGCGTGAAAAACGTACGTC
AACTGATCATAAGACTAGGGAGGAAAAGTACGAGAACAGACGCAAAAACCGGAAACATTT
ACAGACTAGTGAAAGTTCAGACTCTGATGATGAACCGAAGAAACATTCTATATTTGATAT
AGTTGATGATGGCCCGACTTATATTTCCATGTATGATAAGGTTAAAGCTCGTTCATGCAA
AAATATGCAGAAACAAGAGGAAGAAAAACGACAAGAAAAGATTAAAGCAAAATTCAATCA
ACTGAAACAAAGTAGAGCTAAAAGAGAAGAAAAGAAAAGATCCAGTTGGGACGAAGACAG
TGATTCAGATATAAGGCATCATAAATCCTCAATTGATAATTCTACTGATGATGACTCTAC
TTTTAATAGGAACCATAGTAAACTTGACCTTTCAGATTTCATTAATAATATTCAGAAAGC
AGGTGATTTTTCAACAGATTCAATCAGTGAAGGAAACTTGTCTAGTAAATTGTCTCGTAA
AAATTCTAGGACTCGCATCATATCTGATTCTTCTGACGATGAAAAATCCAAACGAAGTGT
AAGCAAAAGTCCTATTTTTCGTAATAATGCTAAAAAAGAATCAATATCGGATTCTGATTC
TCTGTCTACGTATAGAAACGATTTTGATGTCCGTGATCAAATTGATAAGGAAAAAAAGAA
TACTTTACTAAACTTATTTGGAAAAAGCGATAGCGATGACAGTAAGATTAAAAATATTTC
TGATAGAGATAACAATTTTAAATCTTCTGTTATTAAATCGCTCTGTAATGATTTCTCTTC
CGAAAACGAATCAATAGACCGGCTACAAAATAGAAGTTTTAGTGAAATTCGAAGAAAGCA
CAAGAAAAAGCAAAGAAAACATAAAACGGAATCGTCTGATGCTGATTTCAATAAAGAAAA
GAACGACTCTATAGTAAAAGAAACTGACATTGATGCAAAACATAGTGATAAAATTCGACG
ACACAGTAATAAAAAAGAAAAGCGAAAAGAGAAAACCCGCGAAAGTATTGATATCGATGA
CTTTTTCGATGACAAACAAAAAATTAAAAAAGAAAATGTATTACCCTTGAATAACACAAA
CTCATTTGACTGCCCCTCAGAAATAATTCACATTAAAAAGGAGGATAAAATGGAAGACAT
ATTTGGTCCTTTAACAGATGAATCAGATAAGGAAGATCATCCGTCTAATAAGACAGATTT
TATTTCTAAAGAAAATGTGACTTTCGGAAAAACTGAGGAAAATGATATCATGAATATTGA
TTTAAAATCCAAAGATAAAGATGAAACCAAACGTAAACGAGATAAAAAACGTAGCAGGGA
AAAACATTTTATAAAAGAAGACGATAATAGTTTAGATGTTGATGCAGTAAGCAAGGCTAT
AGAAGCTAGACTTTTTGCTGATTCTAACGTTGATGATCGTACTAAATCAGTTAAACATCT
AAACGTAAATAGTGAGGTTAAAGAGGAGACGACTGCTCAAAGTAAAGACCTGACGGAGAA
ACACGAAAGAAATAAAAGGGATTATAGAGACAAAAAAAAGAAAAAGAGGCGATGTAAAGA
TGAACGTATCAATCGTAAAGATATTTTTCATTCTCAAGACAGTAAAAATGATAATATTGA
AAAACATAGTGTCAGTGATGTTATAACCAGTGATCTGACACCTAAGGTACAAACACCCGA
AAACATATTGAAGATAAATGAAATTTCTAGTGATATTTTTGAAAGCAATCCCTTAATCGA
ATCTCCGAGTCTACCGAGATTGACTGATAGCCCACCCAACATAACAAAACCAGAAATTAG
CGATACTAAGGATAACGATGTTATACTTGATTCAGATGCAACCAATACTGAAAGTTTGGA
AGAAAAAAATATCGGAAATGAAATCAATTTGGAAATTGTTACAGAGGAATCACTCCAAGA
GGTTGGGGAAGAAGTTTCTTTAGTCCAAATAGAAAATATATCTTGTAAAACAGATAGTCA
ACATGATAATTTCTCAGAAAACTATAGTTCCGAGGCTAGTGATGCCGTTCGTAGTATACC
GTGTTTAGAAAATGATACAGAAAAAGCAACAGACATTTGCTCAGAAATGAACGATCTTAG
TAAAAAAGTTGACGAAAAACCAAGAGCTGTAATATCTCAGGAAGAAACAGAAGATGCCGT
GGCTGCGTTGTTAGGTGAAAGTTTTGGTGGCAAAGAAGACTCTTTTACAGATTGTTTTGA
TACTACTGAAAATGAAACTTTACAAAAAAATGAAGTAAGCCCTGAAATTAATGTCAATGA
AAACATCCCAGAAGAAGACGCAGAAGAAATGAGACAAGCTGTTCAAAATTTAAATGCAAG
TGAACTCGAGTCAAAACCAGATACTCCTGTTTCTGACAATGACATTTTGTTAATTGACAC
AGATACTGAAGAAGTTGAGGAATCTGTGCAAGATGCGATCGAAAGACTCCCTGTCAATAT
TATTGCTACATCTTTAAATGTTTCTGTGGAACCACTTAAAACAGATGAAATATCTAAGAT
GTCTACACCAGATAAGATTACATCCACTAATGAATTAACACCGAAGAAACCAATCGTGGT
AAAAAAAATTGAGTCTGATTTAAGGGTTAAACCCAAAAAAGACAGCGCAGTGGTAATAAC
ATCAACAGCTACACCGGTTATAACATCTTGGGCCTTAAGCAGTAATAAAATGGTTGAGTC
TCCGGTTATAAATATAAAAACGAGCCCTTTGAATATGAGAGAAAAAGCAGATGGCAAAAC
AACACATATTACAGCAAATATTGTACAGATAAAAACTTCTTCTCCGCAAAATGTGCAAGT
GACAAATTCTATTAGACCCTTGGTTACCCCTGCGAGAGTCAGTGCTCCATACCAAGTTAT
AAATCATGTACAGCCTCCTACTATAAAAATACCTGAGTCACATATATTATATCAGAAATC
GCAAGGCATCGTTATTTCGCCGAGGATGTCATCTGACTCCCATATACAAAATGCGAAAAG
CAGTCCATCGGCTGAGGGTTCACCTTCTCCTCGAATAGCAAACATGGCAATTCTAAGTAC
TACACCTAGTTTGAATTCCACTGCGATCTCCACCGCCTGTACATTGCAGCAACGACCACC
AGGACAAGTTACTGTTGTCCGAATGCAACAACCGCCGCTGAGTCCGATACAAACCATGCA
CATTCAACATGGACCGCGAGCAATCGTGTCACCAAACAGACATAATTCTGTCTTGGTACA
AGCACCAGGACACACTGGCCCTTTTAATAGACAGTCGACACCTATACACGTTACGCCTGT
TTTAACACCCATCAGCAAGCAGGTTAATGTAAATAATTTGATTCAACAAAATAAAAACAT
AGGTGTAAGTAATACATTACTGAACACCATAAAAACAATATCTGGAGAGTGTAAGAAAGT
TGAACATCATGCAACAGAGAGCGCAAAAGATACTCCTAAAATTATTTTGTCGCCAACTAA
TCTACAACAATCCTCAAACCCAACGATTATGGCGCAGAATCGTTTGATTTCCATGCAAAA
TGCTGTGCATGTTGGAAATGTAAATAGCACACTTCACGTAAACAACAAAGTTATAAGGCA
ACTTCATGACAAACGGGAAAATCAAAATCCAGGCTCTGAACCCCTAAGTCATATTACCTT
TGGGAATACTCCCATAATACATGTTGGCGTTAGTCATCCAGCCACGTCTATCATTCAAAG
TAATGTAAAACCAGTTACTTGTGGTATTCAAGATTCCAGCTCTATCAATCGTGGTTCAGG
AACCAATGTCATACACACTGCGAATCCTCAAAGACTGTTGACACCTGTTTCGTTGAGTGG
TGTTCGACAGCTAGAAGTGAATAAAGGTCCATCAGTTCTTTCTATGGCATCTCTTAAATC
TCCAACAGTATTAGCTAAAGTTGATTCACCAATATCTAGTACTATTACTAAAGTGTCACC
TGTATTAATAAAGACAGTTTCATCAGATACTTTTAGATCTGATATACGATTGGAATGCAA
AGAAAAACAAACCAAATGCTTTACTGAAAATAAAATTGAAGAACATGAATTAAGAAATAC
AGAATTTGCATCAAGAGACTGTTGCTCTGAAGGTGCTAGTGCAGTGATTGATGAAGCTGA
AAATAAATGTGGAACTGATTTCGAAGAATTGTTGAAAGACAACACGAACGAGATAAAAGT
TACAAATGATCCTGAGAAAAAACTGGAGATTAATGTTGGAAAAACTGTTACTGTACTGTC
AACAAATTTAAACACATTAGACAAAATCGATACACAAACTACAGATTTGCCGTTCAACAC
TGGTGAAACAATCGAACAATCAACGGTTGAATTTGCATCACAAAAAGTATGCAAAGACAT
AACAGTATCTGAAGTGGTTAATAAGTCTGCCGAGGACCCGAATGGTAAAGAACTTCTTAA
ATTTGAACCTGAACAATTTGCGAAAGTCGACTCAGATACCTCAAGTACCAATAAAACTAC
TACTTTAATAGATGCGACACCAGAAAATCATGATACCCATGTTGTTTTGTCGAAGAACGA
ATCTATCTTAGAGTCAGAAAATGAAATTAAGACTCCCGATGAAACAGACTCTTGGAGTGC
TAAAGATGTCAATATAGAATCCGTTATTAAGAAGGTAGATTCATTGTGTAATGAAATCAA
TGAACATGAAACAAAACCGGAATTTTTAATAAATAATGAAAATCTAGTCGGCGGTGACGA
TAAGACAAAAGTAGAAGAGAATTTACCAACTCAAACAACTGCAATAGATACATCATCAAG
TAACATCAGTCTGTCAGAAAATGTGGATGATTCACTTATGGATAAAGGTACATTAAGTAA
GAGAGGAGGCAAGAGTTTAAGGGGCAGGAGAACGGATAAGAAGCAAAACAAAGTACAGAC
TCGACAAATATCAAAACCAGTGCGAGGTATTACTACAAAACGTGGGCGAGGCAGAGCAAA
GGTTGATAGAAATATTAAAGAATTGGTTAAGAATATCTCTAACCCTATGCCCGGAGATGT
TTATGACTTTCATGAGGATTCAGGTGATGAAACTGCCGGGGCTCCTGCTAAAGTGGAAAG
TAGACCTAGACTTATTTTAACCATCAAAAGTCCTCAATCAGGTCAATGTAATATATTACC
GTCGCCTTCGATAACTATTCCTCCAAGAGAACAACCAAAATCGACTGAAAAAGTTAGTAA
GGAAGAAAAAAATGAAGACTTTATTTCACCTTCCCTTAATACGCGCAAATCTAGAAGACT
ACAAGAAAAAGATGTTCTCCGATGTACTACAGACGATGTGGAAGATTCTTTGAAAACGGA
GAACCTGCAACTAAAAAATAATAAAAAACGATCAACCCGGCAAAATCTTGTCAAAGTGAG
TCAAGATAAAAATATCAGTTCCGATGTACGTAAATCTCCACGTGGGACAAAGCGGGCTAG
GGACCGAAGCTTGTCGGACACATCCACAGAAAGTGGCGACGAAAAGAAAATCAAAAAAGA
AGACAATCTGTCCATTGGGCAGGGTACGCAGCTATCGGGCACGGAAACTGTCAACGACAT
TCATAATCACGAAATTTCAAATCCTGAGAATACAACAGTTTTGTCTGTTATTGCATCTTC
TTCATCTGCAACGAAGATTACAGTCTCCACTATAACTCCGACACAGGCGCCAACGTTCCC
GATCTCCTGCGCGGCGACACCCAAGTCCGGGTCGGACATTGCGTCAGTTTATCCGGCCGT
TCCAACGCCCATTACTAAACCTCCCAAAAAGATGATATCTGAAATGAGCGCAAAACTGGC
TAGCGTCTTCGAAGCTCAGCACGAAGCGGAAAGAGGGATAGAGGTACAGGCGGCGCGCGT
CCCCGCAGCGGCGGTCCCCACGGGCGGCACCGAGGCGCCGGGCGAGGCGCGCGTGCAGTC
CCCCGCCCTGCCGCACCG
(8838 bp)

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