SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12248c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_lysosomal_alpha-mannosidase-like,_partial_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 F alpha-mannosidase activity
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0006517 P protein deglycosylation
GO:0007611 P learning or memory
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015923 F mannosidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:13.32 TPM:13.05
ORF EntryO_TrvaFAMAMG15526_complete:A_TrvaFAMAMG_TR12248c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTAGTCACATTTTATTTATTTCAGTAAATAAACTATTA
CATACAAAGAAAATATGAACTATATATGACTACAACAAATAGTTTTAAAACACTAGAACA
TCATGGCTAAAACGCTTAAGACTTGACTGTTGAGCATAATATTAGAAGTGTTCAGTTAAT
AACTACCTCCGCTATAAACGATCTTATCTGTTTCGCTTTCACTTTTATTTTCAAACCATC
ATCATCAACGAGTTCATCATCATCTTCAACCAGTTTTACATCATCAAAACTTCCATATTT
CTTATTAAAATTCTCGTAAAACTCCTCATCAGTGTTCCATGACCATTTCTTATATTCATC
CAACCACTGACTCGCTGACAACGTGGTTTCTTTAATGCTTCTTATTTTCAAATCGAAGAA
GATATTTTCCAGGTCTAGTTCTATAGTCGAATTGTCACTTTTTGTTCTGTAATTCTCTAT
TCTGATTAGGACTTTGTCTTCCCATGGTTCTAACGTGAGCAAATGTAGACCATCAGGCAT
TTGATTCTTTACGAATTTCTTGCAATTCTCTAGTTTCATATATTCGTCAAAATCAAAATC
TACTTGTGATACGAACACTAGTGGTTGCAGATGCATTTGGTAGACATTTTTAGCGATTGT
TACTTCATCTTTTGTCTGGAATATTCTGTGTTTTCCTCTAACAACTAGACCTAGGCCGTT
TACAGTTTCATTTAAGGCTTCTCCTACTCCAAAAGCATCATCATGCAACAGTCTTCGATG
TAGCATCAGTTCTATTTCTCCTTCAATTAAGGATGTCCCTCCTTGGGACCTATCTGTTAA
CACTGCCAATCTTTTATCATTACTTTCAATATATATTTCATTGGTAACTGGGTAGTAGTT
CCCGGCGATTGGTTCTGCAAGAGTTAAGTTCCATTGTGGTCGTTTGTTCAGCTTTCTTTT
CAGCATTTGTCGTCCGTTAGAGTCCGTGTAGAATTCACCATTGTTGATGATGTCAGTTTG
GTATTTAACAACATATTCTTTTCCAATACCGTCGTTAACATCAATAGGACCGACCAGCCA
CTCGTGCTCGACAAAATCGAACTCTTTGTAAATACGTTCAATGCTCAAAATGCTGTGTCC
TTTGATTTTAGTTCTGATTTCTTTGACGATGTCTCCGTCTATTTCTTGGCTAGTATCAGT
CTGGAGGTCGATGGATTTGGTGGAGTTTGGTCTGAAGATGTAGGCACCAGAGCTCCTGTT
TGCTGGTTCTTCATTGTCACCAACACAGCCAGGGTAGTATGCGAAGGTAATTTTCACATC
ATCAGCGTTCCTCTTTACTTTAGGCTTGCTAAATTTCTCATGTTTCCCATGAGCTATTTT
GGGCTTATCGTAGTCAATGTCAACGAAATTCATATAATTACGTATTTGTTCAAATTCATC
GTCATGTTGTATTTCATTAATGGAATTGAAATTGTATGAATTAGATATTTCTCGCTTGAT
TTTGTTTATTTTTTTAACGTAGAATGTTTTGATTCCGAGCGGATGTAGGTACGCGATGAA
GAATATTTCGTGTGTGGCTTGCGACTTCCGGTTTGGTATGTGGATCACTTCTTCCGGTAT
TTCCACAAGTTGAATATCTATTTTGTCACCGTTTGGCGCGTAAACCTCGTAGCTGCCATC
TTTAACCGGCACTCTCACGGCTTCCTTCACACTCCAAGCCACAGGGTTGTAAACTGTTAC
CATGAATATATCGCTGTTCTCGGATGTGTAACAGCTAGATTCGTTGAAGTGACATCTGTC
ATAGCTGAAATGATGAGGCTTGCTGCCATCTTTGCGCGCCGCTTTATTGAAGGCCTGCCT
GGCGACGAGCAGCGAGTCATCAATGGCGGTGTTCAGCAGTCGTTCATAGTCGTGAGTGAC
GTGTTGCTTCTCCGTGCCCGTGATGGCGTCGTGATGCTGCATTATACCCATAGCGCTTTT
AAGTTCGTCGAGTATGAATTTGTTATGTTTCTCCAAGTTGGATAACACTTGCAACTGTTT
CACCATCTGCAAATAGTCGTTGCCCTCTCTCTCGAAATACTTAGTGGTGGGTCTGGAGGT
GAAGTACCCGGTCCAATAAGCCGTGGGATCGCTCGCGTACGGGAAGAAATCGTCTTGTTT
CGTTGGTAACACTGGATTGGCGTCTTTTATTGCTTTCAAGTAGCAGGTAGGAGTGGAATA
AAACAATTTTATTTCCAGCCCGTCTTTAGCTGCCTTTAAATTTGAATATTCAATCAATTT
ATCTAAATTTCTGAACCACATCGTCGCCTCTTGGTAGTGGAAGTCGTCTCCCATTGTGAC
CAGGATGTTTTCACTTCGGTAGGACTGTGACATATTCCTACAGACTTCCAGGAAACGATT
GACCTTGTCGTCAACATTGAAGAGCGGTGAGTCGGGATCATCAATGATGGGCTCATCGTC
ACACAACACGTCGAAGCAGAACCCGGGCGGAGGAGAGTACGTGTTGTACAACACTCCAGT
GAATATGTCAGATGGTTTCCCAATATCATCGTCGCCCCTCCACACCATCTCCATGGTCCG
GTCCCGGAAGCGACTCCTCTTGTCCTGGTAGTCGATCCTGCCCAGGAACAGGCCGTCGTA
GCCCATGCCGGCCAGCAACGAGGCCAGCTCGCGCGAGTGACCGAACGGGTCGATCTGCCA
GCCGACGCGGGGCAAGCCGCATTCACCGAATGTCGCGTTCAGTTTACTGAGTCCCCATGT
GAACTGATCAATCGTGCTTTGGTAGTGAGAAGCTGCTTCATCGTTCATGGACCACGCACC
TCCTACAAACTGCAGTCGTCCTTGTCTCACCAGAGTGTGAACCTTCCTCTTGACTCGCGC
GGACTGTCTGACCCACCACTTCCAGAAGAACGCTGTCTCCACGTAGATGAACCGTCTCTT
AGGATCTTCCCATAGTTCCTTCACAACTGAATCCAAAATGTATTGAACCCCAGCCTTCTG
TATGTTATTCCTGCTTCCATAGTAATACTGGTCTACCGTCTTCAGCCATCCAACATCATC
GTGTGTATGTGGCACAATATGCACGTTCAAGATACCAGCTTCGGTCTTAGGACAACTCTC
ATACCCGCAAGCTTCCCCCGGTCTCGGCGTGATGTCATCGTGGAACGGCACACTCGACGA
TAAACCGATTAGGAACAATACTTGTAGCAACACCAGCATTATCACTATTTAATGCACCAT
TACTAATAAAGTTAAATGTAAAAGCTTTAAAATTGTGCTGCAGAGATTTCCAACGCGACC
GTTCTGTATCTCGTTAGACTTGTTTTTCTCTCGCTGCTGCCGGCTGAAGATGGTTTATCG
(3360 bp)

- SilkBase 1999-2023 -