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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12242c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_luc7-like_protein_3_isoform_X1_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:21.82 TPM:21.38
ORF EntryO_TrvaFAMAMG15507_complete:A_TrvaFAMAMG_TR12242c0_g2_i1
Sequence
(Nucleotide)
GCTCTGCACTGGTGGATTATAGTGACTAATCTGTGAAATTAATTTTTTAGCCAGATTTCT
GAAAATACGAGATTTGTTTCTGGTTTTGCAATATTTCCAGTAGATGTTTGTTTCGTCCGC
GTGTTGTTATTTAGCTAATATCTTCTAATATTTGAGTTATTTGTAATGCTTTATCATTAA
GATTCAAAAGTCGATCGAAAAAGTAATAGGTATTTACGATGGCGGTGCTCGCGGCAGCGC
AACTCCTTGATGAATTGATGGGCAGGCATCGTAACACTGATCCTAATGAAAAAATCAAAA
AACCTAATTGGGAAGATCAAGAGTACTGCAAGTATTATATGGTTAAATTTTGTCCCCATG
ATCTGTTTGTGAACACGAGGGCTGATCTTGGAGCGTGTCCCAAAGTTCACGATGAAGAAG
TTAAAGAGCTTTTTGAGAAGGCCGACCCGTCCTATAAGAAATCTCAGTATGTGGAGGAAT
TCCTCCGATTCTGTAAACACATGATTAATGATGTTGAAAGAAAAATACAAAAAGGAAAAC
AAAGACTGGAATTGATGAACTCCAAGCCTGAAGCTCCGCCCATGACTCCACAGCAGACTG
AGAAAAATCAGGAACAGGTATCATTGCTATCAGAGAAGATCACAGGTTTAGTACAAGAAG
CTGAAGAGGCCGGTATAAGGGGTGATGTAGAACAAGCCCAAGGTCTGATGAAGCTCTGTG
ACAGACTGAAGGAGGAAAAAGAAACGCTGCTCAAACAGCAGGAGAACAGTCACTGGTCTA
TGACAGCAGAATTAGCAGCCGCTCAGGAGAAGCAGATGGAAGTATGCCCTGTGTGTGGTG
CCTTCCTTATTGTTGGTGATGCTCAGCAAAGAATTGATGATCATCTTTCTGGAAAACAAC
ATGTTGGTTACTTCAAGCTCCGGCAAGCATATGAAGAGATGACCGAGGCGCGTGAAAAAG
AACACCAAGAGAAAGAGAAACGTCGTCGCGAAGACAGAGACAAGGAACGGAACAGTCGTT
CGGGGGGACTCGGGTCAGATCGCCGCGACCGAGAACGCATGGACCGAGACCGCGAGAGAG
ATCGCAGTGAACGCAACGATCGCAGCGAACGTAGTGATCGCAGCGAACGCGGTGAACGCG
GCGATAAGGAGCGGGAGAGAGAACGCGACAGGGACCGACATCGGGACCGATCGAGTCGTG
AAGACCGCAGTAGCCGGCACGAGGAGAGGGACCGGGACCGTGAACGTGACAGGAAACATC
GCAAAGAGAGAAGATCTTCCCACGAGCGTTCCCGTCGTCGTTCGCGCGATCGTCACTAGT
ACTAGACTGAGGTATCACATAAGCGCCTCGATTCGGTAAGTATAATATCACATTTTAAAC
AAACGACGAGCGGCCACACCGTCCATCTTATCTCATACGCTCCTATCATTTCCGTTTACC
CTCATATTTTTTATTTCTAACATTTCAATCCGCCGTCTATTAATACAATAAGTAATAAAG
TGAACAATGTTGTTTTGCAGCTTAACTTAGCATACCAAAATATAACTTCGGTATATGGCA
TACATATCGGGCAGTAAATGACCCCGTTGCACTCTATGTAACGTAGTTGTCGTCACACCG
GCGGACATGGCAGGTATTTGATTCGTATTATGAATAGTTTTCGTGAGCTGAAAACGTGAT
GCGAGCTTGTTTGTTGATCGTACGTTTTTCGAACGATTTACGAACGAGGTCTTTTCAGCC
AGTTCTGTTCGTCGTCGTCTTTTGTTTTTTTAATTTACTTTCGAGGTGTTTCTACGTGTG
TTTCGTCGTCGCGAGAGAAAGTCGTCTGGCGCCCGTCGCTTATGCGATGCCAGGTATTTG
TTAGGGATCTGTCAAATACTGAAAAATATTCTACTAGTCAAGATGGGGTCAACTTGTTAT
CAATAGGAAATGATTTTAGCAATTTACAAATTTAGCTCCACTTATTAATATAGGTACTAG
AAATGGATTACAAGGAGCACGAAATGTAAAAAAAACACAAATAATTACACAAATTATATT
TAGCATGAGAAAAAAATCTCAAAAATCCATTCACAGCTATAACATTTAGCTTACATATTA
AAATGTCGATGCCAAAGTGCCTTGAACAGAGTCATGAAGTGCGCACCGTTGCGTTCGATT
CACGATTTCGGATGCTGTGTTCACATCACCTACCATGTACTTACAGGTACCCAAATAAAT
ATAATGACGTCATACATCATACAAATATCACGACTGAAAAATTTACAAGAAACAAACTCA
AATGGTATTTAGCATTTGATAGATTCTAAAGCGAGGGAAATGACGTCATAATATTGAATT
AATAATAACCCCAAACCCAAGGAAATGAAAAATCAATGATGTTAATACCTGAAAGATTTG
ACATTAGAAAAATAATTAGAGATACATCACGATGGTCATTGATTATTCAGTTCCGCATTG
TCTCGTCTCAAGCTCGTTACTAGCTTCAACCATGGACTTTTCAGTGGGGAAACCATACAG
GAAGATTGCCGCCATCCGACCACAGACAATGAGGTACTTATGAACTTAAGGCAAAGGCGT
CCCCGGGAAGATTTCCAGCCAGTGCAGAATCCGACCTTCTGTTTCGAGGTGACATAGAAT
AGTCACGTATAACAATAAATATAATTTCGATGTTAGAACTTTCAAACATAGAAATGCATG
TCGTCTTAATTAATATTGGCGCTTTATTTCGCTTCTTCCAGACTTTATACTAATTGGAGT
TTAAAGTAAATTTTGAGTTGTCGAATGAAGTGTGTAAGAAGTGAAAACTTAGATTATTGT
CTATGAATAATGTATACATGTAACTACCTCTTCAAATTGTTCGATCCATAGGACGGTCAC
GTCATTACTAAAACGAGTCTCCAATGAGGAGTGTTACAGGTATTTATAACATTTTTATTA
CGTCAATGTTTGTTATTTTCTTATTCTTTGAAAATGTGTGAGTAGGGATAATTTCGAGCG
AATAAAAACTGACTTTAAAAAAAAAAAAAAAAAAAAAAAA
(3040 bp)

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