SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12221c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101742795_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0051721 F protein phosphatase 2A binding
Transcript
Level		FPKM:4.88 TPM:4.78
ORF EntryO_TrvaFAMAMG15471_3prime_partial:A_TrvaFAMAMG_TR12221c0_g1_i1
Sequence
(Nucleotide)
GGAACTTTTAGTTTGTGAAAATCGACATGGATTGTTTTTAGTGTTTTTTAGAATTTTCAT
GTTACTTTTTCTTAGTTTTACTTGAAAACATTATTTCCTGATGTTGTGACCGTTACAATA
ATTGTAGGCTTTCATCAAAATGGTACTCAACGCAGCAGTACAGATGTTGAGGGAAGCAGA
TGAACTGAAACAAAATATTTTAAAATTTAAAAGTGGAACATCTATGCTTCAAGAACAGAA
CTTATGGACATTGCAACAACAGCTACAGAAGATATATCAGAAAGTCTTAGTTTTAGACCT
TGACTATGCTCTGGAGAAGAAAGTTGAACAGGATCTGTGGAATGTTGGCTTCAAACAACA
AATTGAAGCTTTGCAGTCTATATCCAAAGACAGGAAGAATCCTCAACGCAGCGAGGGCCA
GGCGATGCTGTCCCTGGTGCTGCAGTCAGCTGCTGGCTTCTACCTGTGCTTACTGCACCA
GATATGTACTACATTCAAACTAGACCTACCATTCAGACGTCGCACATCCCTAGTGGGTTG
GGTGGAAGGTTGGGGCGCGGGTGAGGTGGCCGCAGGAGGCAGACTCCCGGCCGCGGCCGC
CGCTCGCTACATCTGTCAGCATTGTCTCGTGCATCTCGGAGACTTGGCGCGGTATAGACA
ACAGCTCAGGGTCGCTCATACTTTTTACAGACAGGCGGTGTGCGTGTGGGCGCACTCGGG
GCAGCCGTACAACCAGCTGGCGCTAGTGGCGTCGCGCGGCGGGCGGCGACTGGCGGCGCT
GTACTGGCAGGTGCGCGCGCTGCTCGTCGCCGCCCCCTTCCCGCCCGCGCCCGCCAACCT
CGCCAGGACTCTGCGGGCGGCGGCCAGTGCCAGCAATCAAGAGATGCCAGTGTTACCGGG
CGTCACTGAAAGCGCGGAGTCTCCGACGCCGCTGATCACCAGGCGACTCGACTCCCACTC
CTACGTCACTGAACTCATGAAGGCCTTGCACCTCATACACTCCGTTGAAGATCTGAAGAC
AGCATCCAGCTTAGTGGACAGTTTAAACTCATCGCTCACAGCCCTCGTAGCTACGGACAG
CTTCGAGTCTATGACGCTTATTAAGATGGCGTGCGTTATTATATGGCTGGTGCACTCCTG
CACGGAGGATCTGACGCTGGACAGCAGCACGCTGAGTGAGGACGAGGCTTTAGCGGCGGA
ACTCAGCAGGTCACTCGCGGCCGGAGCGGTGCTCGCTTTACTGCTGCCCGCGTACACTGC
AGACGGACCTTTGGAGAAAGCTTTACCGGCCTTGCGCGTGTGGCTGTGCTGGGCGGCGGT
GCGCGAGGCGGCGTGGGGCGCGCGCCCGGCGCTGTGGCCCGCGCTCGCACACACGCTCAA
CGCACTACCGCACGCACACACGCACGCACACACGCACGCACACACGCACGCACAC
(1435 bp)

- SilkBase 1999-2023 -