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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12203c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_FAS-associated_factor_1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0007253 P cytoplasmic sequestering of NF-kappaB
GO:0008219 P cell death
GO:0010942 P positive regulation of cell death
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030155 P regulation of cell adhesion
GO:0031072 F heat shock protein binding
GO:0031334 P positive regulation of protein-containing complex assembly
GO:0031625 F ubiquitin protein ligase binding
GO:0034098 C VCP-NPL4-UFD1 AAA ATPase complex
GO:0042176 P regulation of protein catabolic process
GO:0043130 F ubiquitin binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048471 C perinuclear region of cytoplasm
GO:0051059 F NF-kappaB binding
GO:1902043 P positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
Transcript
Level		FPKM:18.34 TPM:17.96
ORF EntryO_TrvaFAMAMG15443_complete:A_TrvaFAMAMG_TR12203c0_g2_i1
Sequence
(Nucleotide)
GCGGAAGTCGAAGATGACACCCAGTGTTTGAGTGATTCGCAATTGTAGATGTCAAGTCAT
TAAATTTAAAACTCAATATCTCGTTGCGATGGCAGAAAACAGAGAAGAAATTCTAGCAAA
CTTTCAGGGTATCACAGCCATTGAAGACGTTGCTGAAGCCATTTTTCACCTTGACGAGTC
GAACTGGGATCTATTGGCAGCAATAAACCGAGTGATGCCGCAGGACGGCGCCACTCCGGC
AGCGGAAGTCGAAGATGACACCCACAACGTTGAAATGATTGACGACGATATATCTGTGAT
AACTCCAAAAACGCACCCACCAGACCGAGATGAGAATAATGAAGCGTCAACATCATCACA
TAGAAATAGTACAAACGAGTTCGTGGAACTACAAGTGAATTGGAACAATAAAATGCACGC
AATAAAAATTAATGGCTCTGCCACTGTTAGTGATTTAAAGAAACACATAGAATTAGTATG
CGGAGTGCCAGTTTGCAGACAACTGTTGTCCGGCCTGGGAGGGTCGAAGGCTGTACCTTC
TGCGACACTCAGCAGTCTTGGATTGATCCGGAACGCTGTCATACGACTGAAGTCTGCTGA
CCAACAGATGGTGGCTGATGATGAAGTAGCGGAACGTTTGACGACGACATACACGTTACA
CATCAAACATAATGACAGAGATTACACGCTAAAGTACCCGGGAACTAAATCAGTTAGAGA
AGTCAAGAACGATATCTATTCACTAACGGATATACCGGCTAGACATCAGTCATGGACAGG
CTGGCCTCAAGTATCGGGTCTGGACGACACGGTGCTGGCGATGGTCGGCCTTGACCTGCC
TCAACACGAGCTCACCGTCAAACGGGCGCCCGTCAAACCACAAAAAGAATATAAGAGGAT
AATAGTTGAAAGTTCAGACAGTGAGAATAGTTCTGTTGAAGAAGTTGAAGACACCGCGTT
CACTGGTGAAGATGATATGTTTGTTGATATAGCTAACTCAGAGAGATTGCAGCCGTTAAT
GTCAGATAACGTTGAAGATGAAGCGCTGGGCTGCATAGAGTTCGCGAGCAGGTTCCGTTC
CCGCTACGGACCAAACACGCCTGATTTCTTCGAGGGAACGCTACAAGATGCTATCAAAGA
GTCCTGTCTCAAACCTGCCAAAGAAAGAAAACTCCTCGGCGTTTATTTACATCACGAACA
ATCTGTCCTGTCGAATGTTTTCTGCGCTCAACTGCTGGGAAGCGACGCGGTGCTACAAAC
ACTGTCTGCAAACTTTATTATATACGGATGGGACCTGACGAATCCTAATAATAATAATTT
ATTATTATCGTCAGTGTCAAACGCTTTAGGTCCCGTCGCGAGTATGACGATACAAAGTAT
ACCGGTCGACAGATTACCCGCTTTAGTCATTATTATGAGAGTACGATCTAATACCGAAAT
ATATTCAGTTATTAATGGTAACGTAGGTGTATCAGAGTTAGTCGGCGGTTTAGTTGAGGC
GCTGGAACGGTTCGCGATACAGAGGGACGAGGACGCGCGTATCGAGAGAGAAAGAGATGC
AAGACAGAGAGTCAAACTGGAGCAGGACGAGGCGTTTAACAGGAGCTTGGAGGCGGACAG
GGCGAAAGAAGAAATTAAAAAACAGCAGGAAATCGAAAGAAATTTGGAAATAGAAAGGGC
AGAATCAGAGAGACAAATGGAAGAAGCTAAAAAAGAGGCCCTTCGTTCGGCGGCTGCGGC
GCGCGTCCCCGCCGAGCCCAGCACAGACAGTCTGCATATAACTCGAATCAGAATCAGATT
GCCCCCGCCCCACCACGACTCTATCGAGAGGAGATTTAACGCTTCAGATACGCTCGCTGC
ATTATTTGATTTCCTTGCATCTAAAGGCTACCCCCAAGAAAACTACAAGGTCATCGCTAG
CTGGCCAAGAAGAGACCTAACCTCGGAATCTCAGAGCAGTACACTAAAGTCACTAAAACT
ATGCCCCCAAGAAACGGTGATGCTTGAAGAGCGGTGAAGACCACTGTATCACAGTATTGT
GCATCGGGCTGCGTCGCAGTCAGCCTACGAACTGAGTGGCTTGCACAGAGCTGACAGGCT
TTGTAGACTGTATAAATAATGTTAGAAAATTATAAAAACATTTTTCAACTTGAAAAAAAA
AAAAAAAAAAAAAAAA
(2176 bp)

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