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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12161c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_polymerase_alpha_catalytic_subunit_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001882 F nucleoside binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.01 TPM:0.99
ORF EntryO_TrvaFAMAMG15376_5prime_partial:A_TrvaFAMAMG_TR12161c0_g1_i1
Sequence
(Nucleotide)
ATTAAAAAATATTTATACTATATACACATGATTAAAATTAATTACCCTAAAAAATATTAG
TAAACACCCAGTTCTAAAAGAGCATCTATTTGTTCGGTTTCTGGGAGAATGTCCAAATCA
GTTTCTTCAGCTTTTATTTTATTGGCTCTTGAGTCTAATGTAAAGAATCTGAATAGTTTG
GACAGATTTATGATGGAGTAAGCTGAATGTGCCAAATAATCTTCTACCATTTCTTTTAAA
GTTTCAAATGCGGATGCCACTGGTGACGATATTGGAACTTTTGATTTATTGCATTTGTTG
AGATCAAATAGAAACAAGAAAAAGTTGATCTGTAGGTACAGATCCTTTTCTGTGTACTCC
CGGAACATGACTCCTTTCTCACACAGCCTACAGAGCGGGTACCCTCCCGCGAACGTCTGA
GGCACCCTCTGTGTGCGATGGCCGCAAGCCGGGTCCTCACACGACACCCACCCCGCGTAG
TACTGAGCGTGATACTGTCGTATTTGTAAACTCAGCTGATTCTGTACACTAGCTAAATAA
TCCAAAGGTCGCACATTACATTTCTCGTTTTGGCATCGGTCGAAAAATGTTACACTATCT
TTGTCTAACTTAACAATAGATTCTCGAACTCTGTTCAGAGTTTTGCAGTTTTCATTGACG
CATTCGAAAGCGAACTCTTTGCACGCTCTGTATTTCTCTTGTTCGTTTTCAACCTCGTAT
GTTTCAGTGTCATTCGTTTCCCTTTTAACGGCTTGTTTATAACCCGAGGGATCCAAACCG
AGACAATCCGCCACTCGCGCGGGATCCATTCCTTCTATTGGTTCGCATATCCTCGATATA
ACTGGATGTAGTTGGTGAGCGAGGTAATATTTAAAATCAACTTTGAGATGTTCAGAATTT
TTCAGCTCTTCTATGTGGTAAGCTCTTTGGGTCGCCGAATTAGCAGTTCCATCTTCACAT
ATAATATAAGGCACTATATCACCCTTCTTAAATCTTCTACTGTTCTTATTATTCAGTCTC
ATGGCGACTTGGACGTGTGGTTGTGTATGTTTATCAGCATATTCGTTGGGATTTTTCGTC
AATTGTTTGGTGATGGTTAACATTGAGAGAGGCATTTTGTTGCCCATTAGATCGTCTTTT
AACTTGTTAAGATGATTTTGTATGCTTTCCAGCCTGTCATCGGGTGTTTGTTCAGAGAGA
ATTTGGCTAAGAATGAATTTTCCAGCTTCTGCTGCCAACTGTGACCAGTCTCGTCGCACG
ATATCTAACCCTTTATGTTCCTGAGTGAATACGAATTCACCAATTTTGTTCTTACTTATC
AATACAGCAGCATATTTCTTTTTCTTCAATAGAAGCAAGTACCTGAACACGCCGTCAATA
TCGAGTTCAATTTGTCTGTATTTCTTGTTGATCTCTTTCTTTAGATCGACACCTATTTTA
AAAACAGCATCATAATCTAAACAATTGGTGTTAATCATTATACTATCTGTGTCGCCGTAC
ACTACGTCATAATTCATTTTTTGTACAATATCTTTAGTATCCATTAAGATTTCTCTTCCC
TTCATAGTGACGAGTGCCGCCAGCGGCTTCGCGTAAAATCTGGAATGTGCAAACCCGAGA
CATCCGTACATAGAGTTAGCGGTGAGCTTTAGAGCAGTTTGCCTAATATTGTACTGTACG
TATTGATCCGAGGCCAAATCCGGTGATTTCATAAGCTTTTTGACTTCTCTTCTGCTTTCG
ACTAATTTTCGTATTTGTGTCGGTAAAACTCCTAATTCAGTTTTAGGAGCCGGCAACATG
AGATTGTTTACGTCATCGTCGGATCCTATTCCGTTCTTTCTTTTGATGGTCGTGAAGCAT
ATGTTATACTCTTGAATAATACTAGGATATAAAGAATTAAAGTCCATAAGAAGTATAAGT
TTGTCGTAGAAGCCTTTCTTTGGGTCCAACACAAGACCTCCAGAATACGCAGCTTTTTTC
TTTGCTTGTTTTTTATTAACATTCCCACTATCTTCTTGATCATCATCTTCAGCGATAGTC
TTTTTACCGTAAGCTTTATCAGGCACAATGTAATTTTTCTCTGTGAAGGCGTGGAGCAGT
AAGAATTCATTTCGCTCTGATCTCCCGCCCATTAACGTCCGAGACATTACATTTCCTGCT
ATTTGTGTTATCTGAATAGCGAGTGGTATTACATTCAATTCACACATCATTTTCAATATG
TATGAGGTGTCCTGCATACTCAGTGACACAAGTTGGAATAAATTGCTGCTGTTTTCGTAA
TATTTTGGCAGATCTTCGATTCCGATATCGATTCGTTCTCCTTCCTTCATTTTGAGCACG
TTAACGCAGAGTGTGTCGAGATCGAAGCTTCGAGCTCTGATCAGTTCCATTGCAGATATT
TTTATATCGCAAACTAAACGACCTAAGAAGGCGTCCTTGGCCGCGAACTTTCTTTGTGGA
GCAACAGATCTTTTAAGACGTCCTAATCTAGACCAATTCGGGATATTCAAATCAAGTATA
TTTCCAATGAGAAGATCTTGTTGGAATCCTTGTAGATCGTGCCCTACAACTAAGTCTGGA
TCGAGTTTCCAGAACTGAACCATGAAATAATTGAGAAGTTCTCTCTCTGTATCGCATTTC
GTTAATTTTGTTGCTTTGTATTGTGGAAGAGACTGTTTCAAATCTAACGGCCAAATTTCA
TTACATTTCGTTATAATACAGAAGTGTTGTTGAAACGGCGGGCTCGGGGGCGATTTATG
(2759 bp)

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