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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR12003c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dystroglycan_isoform_X4_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:6.74 TPM:6.61
ORF EntryO_TrvaFAMAMG15192_complete:A_TrvaFAMAMG_TR12003c1_g1_i3
Sequence
(Nucleotide)
TTAAATTAAAAGCTCATTAATATAAATCATGTGCGTATAATGAGAAATTTTCGAAAACCA
AAAAGTTATTTGGGATATAAATCTATTTTACAATGATAGTACTTCCATTTAGTGGACAAT
ATTAAGTACACATGCAAGGAAAAAGAAAATTAAATACAAATTGATATCAATCAATATATA
AAATTGTATACATATTAATAAACACTAAAAAGATCTATAAATGCAAAAATTCTAAATGAG
TACACATTACAAAAAAATACGTCCAAAGAAAAAAGTTATCGTTTATAGCTCATTTCGTTC
GATAGTTTCCTATAGTTTACACAATTTTGTTAACCTTAAAAACTATGGTAATAATTAGAC
AAGTACAAAATGATATTTCATCCTTAATAATATTTACTCATAACCTAAAACTAAAGTCAG
TTGTATATTTTATTACAATATTAAGTTAATTGTATTTCATAGTGTACACACCATCTATTG
AACAACCCATGCATTGTATATAGCGAATTACGACAAATTATTTAATAAGGACCGTCTACT
ATGAACGTAGAATACAATAGTTCAGTCCTACAATACCGCGAACACACACTACTCACAATA
ATATCGCGTCTGGAAGATCTACGCTAAAGGCTAAAACGTTACATTCCGATATGTTTTTAA
TTTAAATTACATTAAAAAACAATTGTCGAAATAATGGCACTCGATCAGCCAAATACACTT
AATTACTGTCATTTTAATATAGTAAATAAATAAGTTGTTTCACTTATTGTAATTGACACA
GTCATGTATGTACTCCAGGCAGTATAGTGTTACAATATTTGGTAATACATAGTCTACGTT
CGTTCACATCACACAATCAATCGTCTCGTCGGACTCTTCGGAACTGTGCCTTACGTCTAG
GAGCTAATGTAACATTGTCTACTTCAACAATACGACTACTGTATATTTATATCGACATGT
ACTCAGCGTGCACTGAAACATCACAATGTTACATCTCTACTGTCGATCTAATTCGTGAAT
AACATTTGTATAAGAAATTCGTTACGTACACTAATATTTATAAACTGCTCACAATTCCTT
GTTTTAAAGATATGAAGTTTCGTCCTAATTTAATATAAATGCAATTTCGATTAACATTAC
AGTATTCAAAGCGAATCAGAGATATTACGTAGAAATTAATTAAAAATTTAGTTGCATCGA
CTAGCGGATCTTAACAATTTTCAACGTTGAAGTTGTCGTATCCGCGTCCCAAATTAAGTC
TCTCGGGTTCAAACCGACCCAAGCGATGCGTCGTCTTGTAACCATAAGATAAATAAGTAC
AACATAAAGTCTGTAATTTACATAGTAAATTGAGTTCGATATTAGAATTGTTAGGTGTGT
GTATTTGGAACGCGGTAACGTTACGTGCTAAGGTTAGTGTGCGGTGCGTCCTTAGGGGGG
CACGTACGGCGGCGGCTTCCTGTAGGTGGGGGTGGCCTTGGGGCGCGGCGGGGTGCGCGA
CGCGGCGAAGGGCGGCGGGGGACGGTACGGCGCGTCCTCGCTCGATCTGTAGTCGGGCGC
GGGCGGCAGCAGCGGCGGCTTCTCCTCGCGCATGATGACGGGGCTCTTGTGCACGGGCTC
GGCGTCGGCGCGCTCCTCCAGCTCGTCCTGGAATATGACGGGGATGCCCTTCGACCGGAA
GGCCTGACGTTCCTCTTCGTCGCCGACGCTCATCTTGCCTGTCCGCCGCCGCCGGTACAG
CACGCACGCCACCACGCCCGCCAGCAGGATCATGCACACGATGACCACGGCCGGGATGAT
GAACGTCACGAGGTACGACTGCTCCGCCGTCTCCGTGGAGCTGTTCTGCAGGTTGGGGGC
GCCGGGGTACACCGCGGGGGGCACCTTGGACACCTTCGTGTTCTGTTCGGCGCACAGCCC
GAGCGGGATGAGAGTGATGGACATCACTTTGAAGTCTTTATCGAATATCTGATCGACGTT
GTCCCGGAGCGCGGCGCCGCGTGACGCGCGGTCGTCCACTATGATCATGCGACGGAGCTG
CTCGATCTCCGCTCGGGGACACCGGTCCATCGGCAGACTGGTGTTGTACCATATAATAGT
AGTGGGGTTATTAGTGATGCTCTGTATCCTGATGTTGTCGGTCTCCTTCTGTCCGAACAG
AGCGGCGAGTTTCTCGACGACCTTCCGTTTGTTGTTGGCGACGAAGGCGAGCTTCGCGAA
CGGATATTCAAGCGTCATTTGGAACTCGACTGTCGGTCGTATCGGAGGCGCCTTCACTAC
TTCTACTATGAGACTGTCGTATGCGCTCTTTTTGCCCGAATCTTCGGCAATCAGTTGATA
AGACACGCTGCCCTCGTCAGTAGGCGTGGGTAGCCCGTAGAACTCCTGGTTCTTGGCGTC
GAACTGCAGCCAGTGTCCGGGCGGGATCTCGGTGCGGTCGCTGTAGCGGAGCGACAGCTG
CAGGTTGCGGGTGCCGCCGTCCTCCGGGTCGAAGAACGTGTCCTCCGGAACCTTGTACAG
TAGCAGATGTCCAGCCGCAGCAGTGAGATGGTCGACCTGGTTGCGGGTGACGGGGGGGTA
GGTGTCGGGCGCGCGGGTGGCGGGGGGCGCGCTGCACACGCCGAGTCCCTCCCAGCGCAC
GCCGAGCACGCGCAGAGCGGGCGACATGGCGCGCGACAGACCTTCGGATGGCTTGCCGGC
TTCGGATTCTGACTCCATTATCTTCATAAGCCTCTTAATATCATCCATAGGACAGGCCGC
GTCTCTAGGCAAAGTGTCGTTAGTCCAAACAAACTCGCACATATCATCAGTCTGCGTCGC
ATTCAGAACCGTCAGATGATCCATGTCCGTATCCCTGAATAGATTCACAATTCCCTCTAA
AGCTCTAATCTGCCAGTCGATGACATTAAATGGTTTGGTTAGTTGGAAGTTCATGATGAA
GCGATGGTTGAGAGTGCGGCCGCTCTTGTGTTGTTGTACGGTGATGTCGAGGGGCCCGCG
CGCCTTGAGGCCGGCGTTGTTCTGCGCTTCCACTATGAAGTTCCAGCGGGATACGTGGGA
TTCTAATGGCAATCCATAGACTTCGAGTCCTGATGGTATGAACTGTATCCAGGATGTTTT
GCTGAGAGGAACGTTTTCTGCCTCGTACATTGTGAACGTCAAGTTTCCACCGTCTTGATC
CGTGAACAGATCAGCGGGGATTATGTATCTGAAAGCTTTTCCAGCGGTAATGGCGAGTTT
CTTCATGTGATGTTTGAGTATCGGCGGCTGGTTGACCGGCATCGCGAAAGTGACCGTTTC
AGTCGTTTGACCGATAATAGTGCTCTTTCCTTCCGTTGCAGTAGACTCCTGCTTAGTGAC
TTCCTCCTCAGTGGTTTCCGGCGCAGGTGTCGTAGTAGCCTCTGTGGTAGGTATAGTCGT
CGCCTGCGTAGTGCTAGTCGTACTGGTCGTCGGCGTCGTGACCGGTACTATCACTGGCGT
GGTTACTGGTGTGGTTACTGGCGTGGTTACTGGTGTGGTTGTCGGCGTAGTGGTTGGAGC
TTCTGTGGTTGTTTTTGTCGAGGTTGTGGAGGACGTAGTGATCGGTTCCGTGGGCTCGGG
CGATTGTGACGTCACGACGGGCGGCTCCGACGACAATGGCGGCAGTTCGTTAGACGCGCG
TATCAATACCGTTTGCACTTCCGGTTCCGTAGTGCTGGGAATGTAGTCCGGTAGTGCTGT
GATACTTTCGATTTGTTTCGGTGGTACCGGTACAAATGTAATGTTATTCAATTCTGAAGA
CGATTCAGAATATGGAGTAATCTTAACGTCGTGATCTTGTTCCACTTCGGGTAGACCGAC
GTCGTTCCTTCGTCCGTCTCCGAAGTTGAGATCGTCGATGTCTTCGTAACCGCTGCCGTA
GTCCTCATCGTCGTCTTCGCCGTCGTACTCCGCGTCATACATGTCGCCGGAACCGTCTAG
TTGAGACTGTCGTTTGGTCCTGTACGTGTGTTTGAGCGCGAGCAGCCTCCAGCCGATGAC
GGGCAGCCGCAGCACGTGCTCGAGCGTTCCGTCGCGCGCCTGCTCCCTCAGTCCGGCGAC
TAGCACCTTGTGTCGACTCCACAGCTTGTTGCCACAACCAACGTTCAAGTAGATGGCAGT
CGTTGCATCTCCTCGTTTCCTTATTGATGAACCGATTCCAGTCAATACTGTATCCGGGTT
TGTTTCAGTCTTGTATGGTTCCATCCAAAATTCATCACCATCCAGGGCCATAAAGTTAGC
GAGTTGCATGAGCGCTCTTATTCTTTGTCTTGGCACTAATTTGTGGAACGCCCCATCGAC
CATAATAAGAAGAACCAGCCTATTTTCTTCGCCAATACAAGTTCCATATTTAGAATGAGG
CTTGTCTGTTGCTCTTTTCACCTCAATAGTAAAAGAATCGGTGGCAGTAAATCCTTTAGT
AGTACCAAAGGCGGTGACAGTGAACGTGTGAGTGCCGATATCTTGATTCTGTGGGATGCC
GCTTATGATGCCGTGTCTTGTGTCCACAGCCAACCAGCTGGGCAAGCGACGACCGTTGCC
ACATCGTACCTTGTAGACTACGACTCTGGCGGAGAATGCTTCTTTAGGGATTTCCATACG
GAATAAATGTCCTACGTAGGCCAATGTATCGGGGACACCCCATAGTCTTCTTAGGCCGTT
TTTCGATATATCAGAGTGGTTTGCTGTTAGTTCAACCTGAAAGTCTTCGTTGTTTTCAAA
AGCGAAGTCGTCATCGTGCTTGCTAAGTGCCAGTGGACACAGCAGGAGCAACGCACAGGC
GATGTATCTTGTGCACCCCATCTTCAACACTCACTAAGCCAAACCTCATAAACTCATCTT
GACGATTTGTTTATATAAGAGCCGCAACGGACGGCGTTTCAGGAACTATTTGGCCTTAAG
AAATCTCCGACTGCAACTGAAGAAACACGATCTTCAAAATTTCGTTGTCATTCACTGATC
ACATCAACTGTTAGCACTAAAATCTATTAAACAACAATTCACTGATTAGTCACTTCGTTT
TCTGAAGCCGGTAAATTTTACTGTTATTTGTTTCGTTGCAGAGCATACGTCTGCCGCGGG
CGGTGACGCGAGA
(5113 bp)

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