SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11997c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		uridine_5'-monophosphate_synthase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0004588 F orotate phosphoribosyltransferase activity
GO:0004590 F orotidine-5'-phosphate decarboxylase activity
GO:0005875 C microtubule associated complex
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0008152 P metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0044205 P 'de novo' UMP biosynthetic process
Transcript
Level		FPKM:6.44 TPM:6.31
ORF EntryO_TrvaFAMAMG15166_complete:A_TrvaFAMAMG_TR11997c1_g1_i1
Sequence
(Nucleotide)
ACACCACAGTGCAGATACAGTTCAACTACGGTTTTGACCGGTTGTGACCACAGATCAGAA
AGTATAGTATTCAAGCTGCTGAACTACTGAATACTAACTTGTTTTATCTATAGTGAACGA
ACCTTCTAACGGAGAAAATTATTATGGAAGATTTAGCCCTTAAATTGTTCGCTATCGATG
CTATTAAGTTTGGAGATTTTACAACAAAAACTGGAATAAAAACACCGGTTTATTTTGATT
TACGCGTTATCGTGAGCTATCCTGAGGTTATGGAGCTTATATCAAACCTGCTTTACGAGC
ATGCAGTGAAGGACAGCCAATATGAACATTTGTGTGGTGTCCCCTACACTGCACTCCCTG
TTGCCACCTTACTCAGTATAAAAGCTCGGAAAAGTATGTTAATGAGGCGAAAAGAAACAA
AATCCTATGGGACAAAAAAAACAATTGAAGGGCACTTTAAGTCTGGTGAAAAATGCCTTA
TCGTGGAAGACGTCATCACATCCGGCTCAAGTGTGCTCGAAACGGTAAAAGATTTACAAA
AAGAAGGTCTTATATGTGCGGAATGTGCCATAATCCTAGACAGAGAGCAAGGTGGCAGGG
AAAACTTGATTGATAACGGTATCCAAGTAAAATCACTATTCACTATGACTACGTTGATTG
AGATACTCAGAAAACATAAGAAAATCACTGAACAAATAGTTCTTGATGTCAAGAATTATT
TAAAAGGAACAAAAGCTCCAGTCCCAGAAAAAGTTGATGATCGGATTCTACTTACATATG
AGAAGAGAGCCGAATTAGCCACAAATTCCATAGCCAAACAACTTTTCAACATAATGGCTA
CAAAAAAAAACAAATTTGTGCCTATCTGTCGACCTAACAACAACAATTAGTATTCTAGAT
TTACTAGAAAAAGTCGGAGAACATATCTGTATGGTGAAAACTCATGTTGACATCATTGAT
GATTTCCGAGAAGATTTTACTGTTAGATTGAAACAGCTAGCCGATAGATATAATTTTCTT
ATTCTTGAGGATAGGAAATTTGCAGATATCGGTCATACAGTATGTTTGCAATACTCAAAA
GGATTGTACAAAATAGGCGATTGGGCAGATTGTATCACAGTGCATTCTTTGCCAGGTGAA
GGCATTCTGAAAGCATTGAATAGTACAATGAATAGTGGAAATAAGGGTGTATTTCTTCTT
GCCGAGATGAGCAGTGAGGGTAACCTAATAGCTCAAGAGTACAAGGAAGCAACAGTCACG
ATGGCATCGAAATACAAAGCCCTAATGACAGGATTTGTCTGTCAGAATAAAAATACATTC
GACACTCCCGGTCTTATTCAGTTAACTCCTGGAGTTCAACTCGAAAGTAATAAGGATGAT
TTTGGTCAAGTGTATAACACTCCCGAGAAAGTGATTATTGAAAACGGTGCAGACGTTGTT
GTGGTCGGAAGGGGAATCGTAGCAGTGAAGAATCCCGAAGTTCAGGCTGTAGTTTACAAA
GATGCTTTGTGGAAATGTTACACTAAGAGGATATCTGGGAAGTTGGAGTAATTAAGCTTG
CAGCAACAGAACTTGCGATGCGATGCGACGGTTCAAATCCCATAAATCCCACTCGTGGGG
TGGGTGGGAATCCGGCGAAGTCTTCCAACACAAAAAAATACTACAAGGACAAACGTTAAT
AAATATAGGTTAAGTACAGTAATGAGACACAAACACTTTTCGGCAACTCAATTTCTAATT
TATTATTTCATAGGTTTAATATTAATTTCTTTCTTAATGGTATATAGAGGGTGGATCTGT
TACATTAGACAATCTGACGTGGGGCTAATGACCTGTCGAAATACAACTTAGCACAATTTT
TATTTTTTAGATCGGTTG
(1878 bp)

- SilkBase 1999-2023 -